LOCUS       NM_001134589            1227 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus charged multivesicular body protein 1B2
            (Chmp1b2), mRNA.
ACCESSION   NM_001134589 XM_001059999 XM_343810
VERSION     NM_001134589.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473969.2.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_001059999.1, XM_343810.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229129.1, FQ220153.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1227
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /note="charged multivesicular body protein 1B2"
                     /db_xref="GeneID:363487"
                     /db_xref="RGD:1566265"
     exon            1..176
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..760
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /note="Charged multivesicular body protein 1b-2-like"
                     /codon_start=1
                     /product="charged multivesicular body protein 1B2"
                     /protein_id="NP_001128061.1"
                     /db_xref="GeneID:363487"
                     /db_xref="RGD:1566265"
                     /translation="MSNMEKHLFNLKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGN
                     TEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDAT
                     LRSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEA
                     GLDLNMELPQGQTGSVGASVASTEQDELSQRLARLRDQV"
     exon            177..274
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            275..421
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            422..490
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            491..598
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            599..642
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            643..715
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
     exon            716..1227
                     /gene="Chmp1b2"
                     /gene_synonym="RGD1566265"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaccgaaaca ggaagtgggc taggatccct cgaaaccagc atcaactgct atcttctgcg
       61 cgtccgagcg acccacgacc cgcgactcgc gggtgcccga cccctgtcct gagtgttacc
      121 ggcccctccc cttcctccca cccggtgaac tggagagatc atgtcgaaca tggagaaaca
      181 cttatttaac ttgaagtttg ctgcaaaaga actgaatagg aatgccaaga agtgtgataa
      241 agaagaaaaa gctgaaaagg ccaagataaa aaaggccatt cagaagggca atacagaagt
      301 tgccagaata catgctgaaa atgcaatccg tcagaaaaac caagcaatca atttcttgag
      361 aatgagtgct agagttgatg ctgtggcagc cagagttcaa actgcagtaa caatgggcaa
      421 ggtgacaaaa tccatggcag gtgtagttaa atctatggat gctacactga ggagtatgaa
      481 cctggagaag atttctgcct tgatggacaa attcgaacat cagtttgaaa cattggatgt
      541 tcagacccag caaatggaag atacaatgag tagcactact accctcacaa cgccacagaa
      601 ccaagtggat atgctgcttc aggaaatggc agatgaagct ggccttgatc tcaatatgga
      661 actaccacag ggtcagacag ggtctgttgg tgcaagtgtt gcttctacag aacaggatga
      721 actgtcacag agacttgctc gtcttcgtga tcaagtgtaa ctcaaataac tggtgcttct
      781 gtttcctcca catatttcag aaacatcatt tatgtgtgta tagatagata ggttgtattc
      841 tagttataaa aacatcatcc atgacaggat gtttgaacat catttacata tgatgctttc
      901 ttttgccttg tggatttcac agtgcattga gaaattctag ggaatttcca tattggcaga
      961 ttttatagtt ctatatatta tgtgtaaaag tgtgagggac atatttttgt agatgtcttt
     1021 ggcaaagcta gcattagttt tctgtatatt atacatcttc ctcaaatatt agagcaaaca
     1081 tctagcacca aagtacttct aagtaatttt gtccaaataa catatagaat aaaagccttg
     1141 tttttactta ttgaaagtaa ctttcagtta ttgtctgtga tgaaatatga ttttgtaaaa
     1201 ataaaaacag ggaaagcatg ttcattt
//
