LOCUS       NM_001105736             961 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus cysteine-rich hydrophobic domain 2 (Chic2), mRNA.
ACCESSION   NM_001105736 XM_001076614 XM_214031
VERSION     NM_001105736.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 961)
  AUTHORS   Cools J, Mentens N and Marynen P.
  TITLE     A new family of small, palmitoylated, membrane-associated proteins,
            characterized by the presence of a cysteine-rich hydrophobic motif
  JOURNAL   FEBS Lett 492 (3), 204-209 (2001)
   PUBMED   11257495
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BE109715.1, BE112096.1, BF558018.1 and BF567482.1.
            
            On Jun 9, 2011 this sequence version replaced NM_001105736.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BE109715.1, EU202679.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                BE109715.1         1-51
            52-222              BE112096.1         52-222
            223-622             BE109715.1         201-600
            623-635             BF558018.1         401-413
            636-961             BF567482.1         13-338
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..961
                     /gene="Chic2"
                     /note="cysteine-rich hydrophobic domain 2"
                     /db_xref="GeneID:83835"
                     /db_xref="RGD:1309278"
     exon            1..167
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..546
                     /gene="Chic2"
                     /note="cysteine-rich hydrophobic domain 2 protein"
                     /codon_start=1
                     /product="cysteine-rich hydrophobic domain-containing
                     protein 2"
                     /protein_id="NP_001099206.1"
                     /db_xref="GeneID:83835"
                     /db_xref="RGD:1309278"
                     /translation="MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTVFGLS
                     NKFESEFPSSLTGKVAPEEFKASINRVNSCLRKNLPVNVRWLLCGCLCCCCTLGCSMW
                     PVICLSKRTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTP
                     IFRPD"
     exon            168..222
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
     exon            223..378
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
     exon            379..435
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
     exon            436..495
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
     exon            496..961
                     /gene="Chic2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgccct agagccaggg ccccaggcgg ggggctcgcc ggcgcgggat ggcggatttc
       61 gatgaaatct acgaggagga ggaggacgag gagcgggccc tggaggaaca gctgctcaag
      121 tactcgcccg acccggtggt ggtccgcggc tccggtcacg tcaccgtatt tggactgagc
      181 aacaaatttg aatcagaatt cccttcttca ttaactggaa aagtagcgcc tgaagaattt
      241 aaagccagca tcaacagagt taacagctgt cttaggaaga acctccctgt taacgtgcgg
      301 tggctgcttt gtggctgcct gtgctgctgc tgcacattgg ggtgcagtat gtggccagtt
      361 atttgcctca gtaaaagaac acgaagatcg attgagaagt tattagaatg ggaaaacaat
      421 aggttatacc acaagctgtg cttgcactgg agactgagca aaaggaaatg tgaaacgaac
      481 aacatgatgg aatatgtcat cctcatagaa tttttaccaa agacaccgat ttttcgacca
      541 gattagcatt tgctttattt atagagactt tccaagtgtg ttgtctttcc aatggtgcct
      601 tgcttggtgc tctcctgctg gtgaaatgat gctggttcta cagaatcggg tggtgttttt
      661 gtttgttctg ttttttaaat aaccgcatgt tctatgtgtg catagttgtc aaactttgca
      721 agttatttca tacagatgtt taatacttaa gttattgtgc tcttttctgt tatatattct
      781 gattttcaag gattactttt tgtattctca aaaaaaaata catttgaact tagcataaaa
      841 atggccagcc tttgttattt tgtcaacaag tttcacatac atagttcttt gtcaattcct
      901 taatatagaa aaacatatta ttatctgtta taacatgctc ctgtgctgtt tttttttttt
      961 t
//
