LOCUS       NM_001399637             728 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus coiled-coil-helix-coiled-coil-helix domain
            containing 7 (Chchd7), transcript variant 1, mRNA.
ACCESSION   NM_001399637 XM_003749892
VERSION     NM_001399637.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jan 12, 2022 this sequence version replaced XM_003749892.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI296147.1, BP503690.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-274               JAXUCZ010000005.1  21754719-21754992
            275-421             JAXUCZ010000005.1  21755226-21755372
            422-491             JAXUCZ010000005.1  21757080-21757149
            492-590             JAXUCZ010000005.1  21758489-21758587
            591-728             JAXUCZ010000005.1  21759137-21759274
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q12"
     gene            1..728
                     /gene="Chchd7"
                     /note="coiled-coil-helix-coiled-coil-helix domain
                     containing 7"
                     /db_xref="GeneID:684258"
                     /db_xref="RGD:1592689"
     exon            1..274
                     /gene="Chchd7"
                     /inference="alignment:Splign:2.1.0"
     exon            275..421
                     /gene="Chchd7"
                     /inference="alignment:Splign:2.1.0"
     exon            422..491
                     /gene="Chchd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             438..695
                     /gene="Chchd7"
                     /codon_start=1
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 7"
                     /protein_id="NP_001386566.1"
                     /db_xref="GeneID:684258"
                     /db_xref="RGD:1592689"
                     /translation="MPMVTRRLRDPDINPCLSESDASTRCMDENNYDRERCSSYFLKY
                     KNCRRFWNSVMIQRRQNGVQPSMPTAAERDEILGAMQKMPY"
     exon            492..590
                     /gene="Chchd7"
                     /inference="alignment:Splign:2.1.0"
     exon            591..728
                     /gene="Chchd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgggggcag cacgttgggg tgcgcgctac ttaaggtcct gctgcgtgag ccactgacgt
       61 gtttggaaca gcaaccggct ccggtgctgg ccgtgtggtg gcctgtggtg agtggtctcc
      121 ggcccctccc tccctgaacg gcaggccgac gacaacactc cgctgagggc agaccccacc
      181 agttcgtggc gccaaaccct ccgcggcatg ctcctgccgc tgctcacgcc actcgattcg
      241 tccggtcggg gcagcggaag gtgaccccat gcaggtttac ggcgtggtga atttctgctt
      301 ccggatttaa cactcacaga ccagactgag aagcctgggg gcctagactt gttcagtaac
      361 gtgcccttcc cccactacgg atcaaagcta cgaggagagt gggaaatcag gaactccttt
      421 gtaagaagta agacaagatg cccatggtca cacggcggct gagagaccct gacataaatc
      481 cttgcttatc ggaatctgat gcttctacca gatgtatgga tgaaaataac tatgacaggg
      541 aaaggtgttc cagttacttc ttgaagtaca aaaactgccg gcgattctgg aattctgtca
      601 tgatccaaag aagacaaaat ggagttcagc catctatgcc tacagcagca gaaagagatg
      661 aaattttggg agcaatgcaa aagatgccct attgagtatt tgcattaaaa ttgtttctat
      721 aacttgaa
//
