LOCUS       NM_199378               3064 bp    mRNA    linear   ROD 31-JAN-2024
DEFINITION  Rattus norvegicus craniofacial development protein 1 (Cfdp1), mRNA.
ACCESSION   NM_199378 XM_214693
VERSION     NM_199378.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Iwashita,S., Suzuki,T., Kiriyama,Y., Dohmae,N., Ohoka,Y., Song,S.Y.
            and Nakashima,K.
  TITLE     Overcoming off-targets: assessing Western blot signals for
            Bcnt/Cfdp1, a tentative component of the chromatin remodeling
            complex
  JOURNAL   Biosci Rep 40 (6) (2020)
   PUBMED   32432658
  REMARK    GeneRIF: Overcoming off-targets: assessing Western blot signals for
            Bcnt/Cfdp1, a tentative component of the chromatin remodeling
            complex.
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Luan,X. and Diekwisch,T.G.
  TITLE     CP27 affects viability, proliferation, attachment and gene
            expression in embryonic fibroblasts
  JOURNAL   Cell Prolif 35 (4), 207-219 (2002)
   PUBMED   12153613
REFERENCE   3  (bases 1 to 3064)
  AUTHORS   Diekwisch,T.G., Marches,F., Williams,A. and Luan,X.
  TITLE     Cloning, gene expression, and characterization of CP27, a novel
            gene in mouse embryogenesis
  JOURNAL   Gene 235 (1-2), 19-30 (1999)
   PUBMED   10415329
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000313.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by NM_199378.5.
            
            On May 26, 2021 this sequence version replaced NM_199378.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212332.1, BC067246.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-218               JACYVU010000313.1  16868977-16869194   c
            219-336             JACYVU010000313.1  16860133-16860250   c
            337-544             JACYVU010000313.1  16857437-16857644   c
            545-672             JACYVU010000313.1  16855934-16856061   c
            673-792             JACYVU010000313.1  16845071-16845190   c
            793-951             JACYVU010000313.1  16791572-16791730   c
            952-3064            JACYVU010000313.1  16779682-16781794   c
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..3064
                     /gene="Cfdp1"
                     /note="craniofacial development protein 1"
                     /db_xref="GeneID:292027"
                     /db_xref="RGD:735080"
     exon            1..218
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             155..1042
                     /gene="Cfdp1"
                     /note="bucentaur"
                     /codon_start=1
                     /product="craniofacial development protein 1"
                     /protein_id="NP_955410.1"
                     /db_xref="GeneID:292027"
                     /db_xref="RGD:735080"
                     /translation="MEEFDSEDFSTSDEDEDYVPSGGEYSEDDVNELVKEDEVDGEEQ
                     AEKTKGKRRKAQSIPARKRKQSGLLLDEEEDGEEDSGGSSREEDEEEQEGGLGSETSR
                     KKKEDELWASFLNDVGTKSKAASSSQVKVAEETEETSSSKPLVKADELEKPKESEKVK
                     ITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAGSGIKRTS
                     GMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLER
                     VDHRQFEIERDLRLSKMKP"
     exon            219..336
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     exon            337..544
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     exon            545..672
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     exon            673..792
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     exon            793..951
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
     exon            952..3064
                     /gene="Cfdp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcttttatc acgtgacacc gtctacgcat gtgcgctccc ctctagggcg gccctagctg
       61 ctggtcctgt acctctatgg tctcgcccta gagcttcgct attttggggc agtggccgca
      121 gtcgtgttgg tagcaggccc caagtgacag cagcatggaa gaattcgact ctgaagattt
      181 ctccacatcg gacgaggatg aggactacgt gccatcgggt ggcgagtaca gtgaagatga
      241 tgtcaatgaa ttagtgaagg aggatgaagt ggatggtgaa gagcaggctg agaaaaccaa
      301 agggaaaaga aggaaggctc agagcattcc agccaggaag agaaaacaaa gtggcctctt
      361 attagacgaa gaggaagacg gcgaggaaga ctctggaggc agcagtaggg aagaagatga
      421 agaggagcaa gaaggaggcc ttgggtcaga gacttcgagg aagaagaagg aagatgaatt
      481 gtgggccagc ttccttaatg atgtaggaac aaagtcaaaa gcagcctcaa gttcacaagt
      541 taaggtagca gaggagactg aagagactag ttcaagtaaa ccattggtga aagcagatga
      601 actagagaaa cctaaagaat cagaaaaggt gaagattacc aaggtgtttg actttgctgg
      661 cgaagaagta agggtgacta aggaagtaga tgctacatct aaggaagcca agtctttcct
      721 caagcaaaca gagaaagaaa aaccacaggc tcttgtcact tcagcggcaa caccaccccc
      781 tgctgggtca gggataaaaa gaacaagtgg gatgagcagc cttttaggga aaattggagc
      841 caagaaacag aaaatgagca cccttgagaa atccaaattg gactgggaga gcttcaagga
      901 ggaagaaggg attggtgaag agctggccat ccataaccga gggaaagagg ggtacatcga
      961 acggaaagct tttctggagc gcgtggacca caggcagttt gaaattgagc gagatctcag
     1021 gctgagcaaa atgaaacctt gatgttctgg ggagaattcg tagcagctta attctgttga
     1081 caatgtgagc tcttctctgt gtctgtgaaa tctccagtgg tctccgtcat gtttccagca
     1141 agtccctttt tctacgttgc agtttggtta atgtatctta atctcacctg gtttcatttt
     1201 actttttaaa atttgttttt aaataaacaa atagaagccc tctgtgaggt tggtgaaagg
     1261 aaagctgctg tgccccttcc ctggccagcc aggcccagct gccacatctc agactgtccg
     1321 ttcacaagtc tctaaaatca gcctttccca gagaccccta agggcgtttt ctggggtggg
     1381 cacagtctct gagcatttgt tctcagttca ttcagctttt ctcttgtgtg agagcctctt
     1441 gtgtgaggtg gggacactgg ataagcgaac actgagtggc tgtgtatttc cacctcagtg
     1501 gttcttcagc tttgtgtatt gtcgagagag atcctggcca gtaatgctgg cacacaccta
     1561 cagtcccagc gcttggaact gaccagaact tctgcaaatc tgagggcagc ctgggctaca
     1621 tagttccaga ccagcctagg atggagagtg agtaatgggg tagggagtag gtctttccaa
     1681 agacctcgtg ttctttatac tccttaggag acttcccaac tcaaacttcc tgcccaggaa
     1741 gcattgaaga gaagactaag tgacaagcca cccattacag cactaaattc catcccctgt
     1801 tccaagggca tgggaatgga gagaaaatgg gctgcaaaga ctgcattctg tttcctgctc
     1861 agacacagct ctgtggcctt accatagctt tgttttctgg gctgtggatg gtgtgaatca
     1921 catcagtctc tcagagggtc aaatcatcag tgagctgatg ccagcctaag accaaagaac
     1981 actgggtcac aatgggcttc cccattgtat ttgtaacagc caaaactgag ttggtggcac
     2041 cagatggctg gcatctcatt aaccaaaaag gaagtttaca agctacattt gaactcgtgg
     2101 tctgttcaca tccatctgca aaggactgta caggtgacac agggtatacc aaactggcat
     2161 catgacagat ggcctctact gagatttaga tgatgaagtc atgtaaccag aaccagccag
     2221 caccccagta ggataggacc tccatacctg taagacgggg ccctcctata gtctgcctgg
     2281 catgtcaccc actgcactgg cttggtattt ctcttgcagt tctgtgtacc ccagcatccc
     2341 atctcagcag ccatagtatc atcagtgcat gagccaactc tggccatata tgcagatact
     2401 ctgcaatcct taggctaaag ggccatgtac acagcggtaa cttgggtttt cctcttagca
     2461 aagtcagtgt ggatcagtga gactcgtcta tgggtgtcag ccctgctagc cctcacaata
     2521 gtctttttcc atccatggcc tgcattaagt gttcattacc tctctagaaa aggctggggc
     2581 tggggttggg gatttagctc agtggtagag cacttgccta acaagcgcaa ggccctgggt
     2641 tcggtcctca gtcgtccccc ccccccccaa aaaaaaaaaa aagagtagaa aaggctgtct
     2701 ctttctcctg ggtgtgggca cttgtgaccc aggtgatact gctttgaccg acttaggtac
     2761 atacactaaa tgaagtgtgt gtatgtagca acgtgtgttg gcatcagtga gactcacagc
     2821 agacctgggt catcatggca gtctggctgc aggggaggct gcagatgtgt gcatgcagtt
     2881 ttcccagccc ctctcaaaag ctgaccgtct ttttctgaag gtgtcccgga gaatagggag
     2941 gtcaagatga aagccatgtg ttggcagtta ctgagcctgg aagaggggtg tacacaatcc
     3001 tcgtgttatt ctcagcttcg atatggattt caacttttca taataaaata ttttctaaag
     3061 ttgt
//
