LOCUS       NM_001014001            2069 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus cilia and flagella associated protein 97
            (Cfap97), mRNA.
ACCESSION   NM_001014001 XM_224861
VERSION     NM_001014001.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082052.1.
            
            [WARNING] On Mar 21, 2025 this sequence was replaced by
            NM_001014001.2.
            
            On Apr 20, 2005 this sequence version replaced XM_224861.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082052.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q11"
     gene            1..2069
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /note="cilia and flagella associated protein 97"
                     /db_xref="GeneID:306469"
                     /db_xref="RGD:1307325"
     exon            1..128
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
     exon            129..1225
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
     CDS             145..1791
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 97"
                     /protein_id="NP_001014023.1"
                     /db_xref="GeneID:306469"
                     /db_xref="RGD:1307325"
                     /translation="MDRFGDISEGEVDHSFFDSDFEDTKKCESNSIFDKQNDDDFKEG
                     INKDIKNLNLKFGVQNDNLKEKIDNDTENVNVKLGIQTKENYLTQKGNERKPKFPSKE
                     QHVENDPIQTRSPSLLTSSRSKKLCDTTKGNKLHLPVPNRIPKIVKGEDDYYTDGEES
                     SDDGKKYHVRSKSAKPSSNLKKNNTSKKYSKASSSSLSSSSSRSSSDCSDIGSDMQNK
                     PDSGSSGKRVSSVTPSSPKQKCKSGRKSSAKQKAGDYNAESEDNVTDVTPASTPDSSP
                     AQPFELSQSQNQKVKVKRQENVSRDVYEDVEALKNDSRCLKSAKRKEKHGQNFAPKSS
                     VLDANLDRRSKQKVLHDTMDLNHLLKAFLQLDKKGPQKHHFEQPSIIPRKNYSFTREE
                     VRQIDRENQRLLKELSRQAEKPGNKSTIPGRSLGHPPKLYHSALNRQREQQRIERENM
                     ALLKRLEAVKPTVGMKRSEQLMDYHRNISYLNPSPSVRRVRSTLGHYSPLRGASRTSS
                     ATSGLSCKTDRSVLDTSSGFLLRPKPPNIQCSNSKVLRSH"
     exon            1226..1494
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..1645
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
     exon            1646..1752
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
     exon            1753..2043
                     /gene="Cfap97"
                     /gene_synonym="RGD1307325"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccacagtt cccaggtgag cggctcacgg gcttccgcat ccggtcggtc tccagcgggc
       61 gagacgccct cctctgcgtt cggggtccgt ttccccggtt cggtgcccga cggaggcgag
      121 cacccaggat atacttttgg catcatggat cggtttggcg atatctcaga aggtgaagtg
      181 gaccattctt tctttgacag tgattttgaa gacacaaaga aatgtgaaag taattccatt
      241 tttgacaagc aaaatgatga tgactttaag gaaggaataa ataaggacat caaaaattta
      301 aacttgaaat ttggagtaca aaatgataac cttaaagaga aaatagataa tgacacagaa
      361 aatgtgaacg tgaaacttgg gatacaaaca aaggaaaatt accttactca gaagggaaat
      421 gaaaggaaac caaaatttcc ctcaaaggaa caacatgtag aaaatgaccc tatacaaaca
      481 agaagtccct cattgttgac ttcttcaagg tcaaaaaaac tgtgtgatac cacaaaagga
      541 aataaactac atttgcctgt tccaaataga attcctaaaa ttgtgaaagg tgaggatgac
      601 tactacacag atggagagga aagcagtgac gatgggaaga agtaccacgt gaggtctaag
      661 tcagcgaagc cctctagtaa cttaaaaaag aacaacacaa gtaagaagta ttccaaagcc
      721 agttcctcct ctctgtcttc ctcatcttca cgatcaagct cagactgctc agatatagga
      781 tctgacatgc aaaataaacc tgattcaggt tcatcaggga aacgagtttc tagtgtaacc
      841 ccctcatcac caaagcagaa gtgtaagtca ggaagaaaat caagtgctaa acagaaggca
      901 ggtgactata atgcagagtc agaagacaac gtaacagacg taactcccgc gtcaactcca
      961 gacagcagcc ctgcccagcc atttgagttg agccaatcac agaatcaaaa agtaaaagtt
     1021 aaaagacaag aaaatgtgag ccgggatgtg tatgaggatg tggaggcttt aaagaatgat
     1081 tcaagatgtc tgaaatcagc caaaaggaaa gaaaagcatg gacagaattt tgctccaaaa
     1141 tcatcagtgt tagatgcaaa tctagaccgt agatccaagc aaaaagtctt acatgacaca
     1201 atggacctta atcatctgtt gaaagctttc ctgcagttag ataaaaaggg accacagaaa
     1261 catcactttg agcagccttc aataatacct aggaaaaact actctttcac aagagaagag
     1321 gtgagacaga ttgatcggga gaatcagagg cttttgaaag aactgtcaag acaggctgaa
     1381 aaaccaggaa acaaaagtac aattcctgga agatcgctcg gccatccacc taagttgtat
     1441 cacagtgctc tcaacagaca gagggaacag caaaggattg aaagagaaaa tatggcttta
     1501 ttgaaacggc ttgaagctgt gaagccaaca gttggcatga aacgctctga acagctgatg
     1561 gactaccatc ggaatatcag ttacctcaac ccttcaccgt ccgtcagacg agtgagatct
     1621 actcttggcc attacagccc actgagagga gcttccagga catccagtgc aaccagtggt
     1681 ctcagttgta agactgatcg atcagtgttg gacacatcca gtggcttttt gctaagaccg
     1741 aaacccccga atatacaatg cagcaactcc aaagtattaa gatcacacta agctgaagat
     1801 gcacctttgc cctggttagc aacgcaaaac cgtatcgtca tacatgccaa ggccttagcg
     1861 tgtagatgtc tgtacaccgg cacagcgaat gagctcactg ctaatggctg agttgcttat
     1921 tttcatgaac aaagattagc aagaaactgt taaaccatct ttttaaaaac tgttctagtt
     1981 tgtcatattt taggcatgaa gaactagctt ggcttactga agaaataaaa gatttaaaga
     2041 gaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
