LOCUS       NM_001109164             866 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus cilia and flagella associated protein 95
            (Cfap95), mRNA.
ACCESSION   NM_001109164 XM_001078678 XM_574641
VERSION     NM_001109164.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Zhou,S., Liu,Y., Ma,Y., Zhang,X., Li,Y. and Wen,J.
  TITLE     C9ORF135 encodes a membrane protein whose expression is related to
            pluripotency in human embryonic stem cells
  JOURNAL   Sci Rep 7, 45311 (2017)
   PUBMED   28345668
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            [WARNING] On Apr 23, 2024 this sequence was replaced by
            NM_001109164.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_574641.1, XM_001078678.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CF112888.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q51"
     gene            1..866
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /note="cilia and flagella associated protein 95"
                     /db_xref="GeneID:499334"
                     /db_xref="RGD:1560242"
     exon            1..241
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..776
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /note="uncharacterized protein C9orf135 homolog"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 95"
                     /protein_id="NP_001102634.1"
                     /db_xref="GeneID:499334"
                     /db_xref="RGD:1560242"
                     /translation="MGTFNSSCHECFKRKERWYEIGPTDLLERKGSLTLRSQDKKYSG
                     PVLVYSWHRNREAFPKDYDMEDPKVATNLCKSTYHRLGTDSPRWVSEAQEQMSQVLVN
                     KDFLEKKKKALVHDETMCLGILESDPQLLPSGFREASMEPPPDPRKQCYSTTYSEDYV
                     PQYEYPPPACPLQDDYSIVHRKCRSQFTDLNGSKRFGINKWHDESGIYANSKAKQKLY
                     ALAGNPIVPL"
     exon            242..347
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
     exon            348..466
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
     exon            467..535
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
     exon            536..593
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
     exon            594..866
                     /gene="Cfap95"
                     /gene_synonym="RGD1560242"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagacgcag aatcttggtt cttgttacta agagctggac tagcgctgag ggaagtccag
       61 tcttgtctgt tctcaactgc agcgcaggca tggggacctt caatagctca tgtcacgagt
      121 gttttaagcg taaagagcgg tggtatgaaa ttggacccac ggatttgctg gagcgcaaag
      181 gctccctaac tctccgctct caggacaaga aatactcggg gccagtgttg gtgtattcat
      241 ggcaccgtaa cagagaagcc ttccccaaag attatgatat ggaggatccc aaggtggcga
      301 caaacctgtg taaatcaaca tatcatcgac ttggaactga cagtccaaga tgggtatcag
      361 aagcacaaga gcagatgtcc caagttttgg taaacaagga cttcctggag aagaagaaaa
      421 aggccttggt acacgacgag acaatgtgcc ttgggatttt ggaaagtgac cctcaattac
      481 ttccctcagg ctttcgagaa gcttctatgg aacccccacc agatccgaga aaacagtgtt
      541 attcgacaac atattctgaa gattatgttc cacagtatga atatccacca cctgcttgtc
      601 cgctccaaga cgactactcc atagtccaca ggaagtgccg ttctcagttc acagacctca
      661 atggctccaa aagatttggc atcaacaaat ggcatgatga gagtgggatc tatgctaact
      721 caaaggcaaa acaaaaactc tatgcattgg ctggcaatcc tattgtccca ctttaaaaag
      781 caatgataca atcagacgtt caagctaacg aaaaataaca aatgtagtag ctaataattt
      841 tcataataaa catagtcttc taacct
//
