LOCUS       NM_001127563            1739 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus cilia and flagella associated protein 77
            (Cfap77), mRNA.
ACCESSION   NM_001127563 XM_001079271 XM_575101
VERSION     NM_001127563.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166521.1.
            
            On or before May 23, 2008 this sequence version replaced
            XM_575101.2, XM_001079271.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166521.1, FM103225.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..1739
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /note="cilia and flagella associated protein 77"
                     /db_xref="GeneID:499765"
                     /db_xref="RGD:1564114"
     exon            1..226
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..883
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /note="uncharacterized protein C9orf171 homolog;
                     uncharacterized protein C9orf171-like"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 77"
                     /protein_id="NP_001121035.1"
                     /db_xref="GeneID:499765"
                     /db_xref="RGD:1564114"
                     /translation="MPDPGKPRKDLSRWKKKKQPVHRTVSQICPPPRRPLTVVDIRPG
                     MENERLGVVRDSMFQNPLIVKAELGKPRERSCSLPGVDFNYGLYIQGIDGGVPEAIGH
                     WNVFKQQPTCPHELTRNYIAMNRGAVKAGLVTARENMLYRELNDIRINDQEDRRQKEP
                     PSIPPNMTFGIRSRPSTPFFDLLQHRYQQLWIQEQKATQQAIKMEKKQKVILGKLYET
                     RSSQLRKYKPPVKLDTLWHMPHFKKAVSHLDTFPTDAARQRALKAHKEEHAVRQGTLR
                     MGNYTHP"
     exon            227..326
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
     exon            327..552
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
     exon            553..658
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
     exon            659..760
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
     exon            761..1707
                     /gene="Cfap77"
                     /gene_synonym="RGD1564114"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagccagggt ctgatcccgg agacccccag gatgcctgac ccggggaaac cccggaaaga
       61 cctctcgcga tggaagaaga agaagcagcc cgtgcaccgc acggtcagcc agatctgccc
      121 gccgccccga cggccgctga cggtggtcga catccgcccg ggcatggaga acgaaaggct
      181 gggggtcgtg cgtgactcca tgtttcagaa cccgctcatt gtcaaggcag aacttggcaa
      241 gcccagggag agaagctgca gcctgcctgg cgtcgacttt aattatggac tctacatcca
      301 agggatagat ggaggggttc ctgaagccat tgggcactgg aatgtgttta agcagcaacc
      361 cacctgtccc catgagctga cccggaacta tattgccatg aaccgagggg cagtcaaagc
      421 tggcctggtg actgcccggg aaaacatgct ctatcgtgaa ctgaatgaca ttcgaatcaa
      481 tgaccaggaa gaccggcgac agaaggagcc gccctccatc cctcccaaca tgacctttgg
      541 catccgttca cggccctcaa cacccttctt tgacctgtta caacatcggt accagcagct
      601 atggatacag gagcagaagg ccactcagca agccatcaaa atggagaaga aacagaaggt
      661 aatcctggga aagctgtatg agacgaggag cagtcagctg aggaagtaca agcctcctgt
      721 gaagctggat actctctggc acatgcctca cttcaagaag gcggtttccc atcttgatac
      781 gttccctacg gatgccgctc gccagagggc tctcaaagcc cacaaggaag agcatgctgt
      841 acgccagggc accctacgaa tgggcaacta cacccacccc tagcctcctc acagggggag
      901 cctcctagat gcgctgggaa aaaaatcccc aaagagctca gttttctccc ccagacccca
      961 ggatgacagt cctacacttt gacacaaccc tttgccacag ggacctcaga ttcaagtctt
     1021 aggttgctta ttttctttat aagaaccccg acccacacac acccttttgt tacacaacac
     1081 cagtcctgtc tttcctctag tttccctttg cctagaaacc accatcctcc tcaaaattct
     1141 tttccccttc tcctcacccc ttcctctctt cttccctttc tctttctatt ttaccccctc
     1201 ctccttcagg agacccactc tgcctctttg caagtcttac tttacaagat aaaccaaaaa
     1261 tacaaggcag ttctttaaaa aaaaaatatc caggctaaga gtcagcttca ctgcctatgc
     1321 ctgtgcactt ccacaaggcg tagcgccagt aggcgttgga agcactcatt tcttattcca
     1381 aacacgagtt ttaattgccc ttctgggcac ggctggggtc tcaacacagc aggagtctct
     1441 ctctgggacc cctgacagta ggaagaaccc gcggttcatt actcagaggt aggccccgcc
     1501 ctcagtgctg tggccctgtc aatcagacag acccgcctgg acttcttaag actatctgga
     1561 tgtggttcac tcttccaaag gagaatgcct tgtggtgggc aggtggcagc cgtggactat
     1621 ctcttgattc atacctttct ctggtgtctt tggcttctct ccacaaatta caaagggatt
     1681 tattttaaat ataaaaagat gacttgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
