LOCUS       XM_222198               1710 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cilia and flagella associated protein
            73 (Cfap73), transcript variant X1, mRNA.
ACCESSION   XM_222198
VERSION     XM_222198.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_222198.10.
            
            On Jan 21, 2021 this sequence version replaced XM_222198.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1710
                     /gene="Cfap73"
                     /note="cilia and flagella associated protein 73; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 18 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:304509"
                     /db_xref="RGD:1561303"
     CDS             102..1019
                     /gene="Cfap73"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 73
                     isoform X1"
                     /protein_id="XP_222198.5"
                     /db_xref="GeneID:304509"
                     /db_xref="RGD:1561303"
                     /translation="MAVAWEEYFRLAFKEKLHPKPLADDSSALQLILEKKQEVAVTDQ
                     GLQAQRKEFRSTMESVNQRWIELAQKGQALKGSAIYFDKLRKEAEARSEVWKAIQERH
                     RMHNLEADVLRLRAQLKELQLQRERLQRRVQRLEPCAQILEGVRKQLPQFQEVLDMVA
                     RFQVLVDTKAVLKLAETDRHVEVEATRARLLRLREAKQVELLRLNQERIRLCEQLEAA
                     RELTQQRESKWTEIQNKASEKSLLLGRTRMAVLNLYQLVCMKQGQKQILDMEDIEGQL
                     EEVKQFIMSVSAILASFDQPKAKPTETAS"
ORIGIN      
        1 tgcccaggca accgtgactc ggtcaacctc gggcttctag gagttccaga ctgggccgtt
       61 cctcagcttg tgctaaggtg gctggagaca cctgtgggag aatggcagtg gcctgggagg
      121 agtatttccg gctggccttc aaagagaaac tgcatccgaa gccactggcg gatgacagtt
      181 cggccttgca gcttatattg gagaagaagc aagaggtagc agtcacagac cagggtctgc
      241 aggcccagag gaaggaattc cgcagcacga tggagtccgt gaaccagcgc tggatagagc
      301 tggcgcagaa agggcaggcg ctaaaggggt ccgccatcta ctttgacaaa ctccgtaagg
      361 aagctgaggc ccggagtgag gtgtggaaag ccatacagga gcggcacaga atgcacaacc
      421 tggaggcaga tgtgctgcgg ctgcgtgcac agttgaagga gctacagctg caacgtgagc
      481 ggctgcagcg gagagtgcag cgcctggagc cctgcgcgca gatactggag ggcgtgcgga
      541 agcaactgcc ccagtttcag gaggttttgg acatggtggc gcgcttccag gtcctggtag
      601 acacgaaggc ggtcctgaag ttggcagaga ccgatcgaca tgtagaggtg gaggcgaccc
      661 gtgcgcggct gctccgtctg agggaagcga agcaggttga actgctgcgt ctgaaccagg
      721 aacgcatacg actgtgcgag cagttggagg cggcacgcga gctcacacag cagagggaat
      781 ccaagtggac tgaaattcag aacaaggcat cggaaaagtc gctgctccta ggacgcacta
      841 ggatggctgt gctcaacctg taccagcttg tttgcatgaa acaggggcag aagcaaatcc
      901 tggacatgga ggacatagag gggcagctgg aggaggtgaa gcagtttatc atgagtgtct
      961 cagccatact ggccagcttt gaccaaccta aggctaaacc cacagagact gcctcctaaa
     1021 ccgactaggc gaacagtgaa gggaacccga ggaaccaagt cccacgtttc ttggtgtgca
     1081 ggcttaacac aactgctctc tgaatctcct ttctcctggc aagatggagc catggcagct
     1141 cacgccattg tgagccttcc acaggacact cagtatgaac tcagttaagt agacaatggg
     1201 gtgggcagct gtgctgctcg ctccacccac cacacaggct ggggacgggc ctctcccagc
     1261 tggctggggg cattggacaa gctcagacag ggctggtgca tgccaagacg ggcccttgct
     1321 gtgcacagtg tctgaggtga ttatcagcac catctgcttt ttggtctgca ctggggtcca
     1381 gctgctggag gatgcttgcc accctccacc cccaatcaag aggtgaggaa agccaccagc
     1441 aggatggcgc acccgaggat ggcacaggct ggttctctct tccatgtgca agagggcaaa
     1501 gccacccaca gccttcctct gccctgcagt ggtgctgagc cgccatgggc aagtggatcc
     1561 agccactcat tttcttcatt cggcggccag gagcgacaca caggcatggc cacttgctct
     1621 cagcctcagc tgagacacct tccagtatcc taagcaagct acactcctgg tctactagag
     1681 gcagtaaagt ttactcatta aaactcaata
//
