LOCUS       NM_001134636            1638 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus cilia and flagella associated protein 68
            (Cfap68), mRNA.
ACCESSION   NM_001134636 XM_001070908 XM_576409
VERSION     NM_001134636.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001134636.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.45144.1,
                                           SRR26360181.1697231.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-240               JAXUCZ010000008.1  60007463-60007702   c
            241-471             JAXUCZ010000008.1  60006474-60006704   c
            472-538             JAXUCZ010000008.1  60005335-60005401   c
            539-1638            JAXUCZ010000008.1  60004034-60005133   c
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q23"
     gene            1..1638
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /note="cilia and flagella associated protein 68"
                     /db_xref="GeneID:500995"
                     /db_xref="RGD:1564937"
     exon            1..240
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..687
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /note="UPF0686 protein C11orf1 homolog"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 68"
                     /protein_id="NP_001128108.1"
                     /db_xref="GeneID:500995"
                     /db_xref="RGD:1564937"
                     /translation="MNMELPYKNPCSLKISSKSLYSPSSYTSIIQRQNLVCYLRNPHY
                     GSLIYADGHGEVWTDWNNMSKFSQYGWRCTTNENSYSDRTLIGNWNQERYDIKNVVQP
                     KPLPSQFGHCFETTYDASYNSKKPQSTHRFKREPHWFPGHQPELDPPHYKCTEKSTSM
                     NSYSKPQPTHYSWCVYDPK"
     exon            241..471
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /inference="alignment:Splign:2.1.0"
     exon            472..538
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /inference="alignment:Splign:2.1.0"
     exon            539..1638
                     /gene="Cfap68"
                     /gene_synonym="C8h11orf1; RGD1564937"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tacagtccca tccttcactg ctatggtatt gggtttgcct gcctgtgaaa ggcagtcggg
       61 ttgtgtctct caaaccatga ccatctgtct gtggtgatct gcacaccttt gttagcagaa
      121 ctggaaagat caggtttgga gacattaatg aacatggaac tgccatataa aaatccctgc
      181 tctctgaaaa tttccagcaa atcactgtat tcaccatcaa gttacacatc aataatacag
      241 agacaaaacc ttgtctgtta cctcagaaac ccacactatg gcagccttat ttatgctgat
      301 ggtcacggtg aggtgtggac agactggaat aacatgtcca agttttctca gtacggatgg
      361 aggtgcacca ctaatgagaa ctcgtattcg gaccgtaccc tgataggcaa ctggaaccag
      421 gaaagatatg atataaagaa tgttgtgcag cccaaaccct tgccttccca gtttggacac
      481 tgcttcgaaa caacatacga tgcaagctac aacagcaaaa agccacaatc aacacatagg
      541 tttaaacgag agcctcattg gttccctgga catcaacctg agctggatcc tcctcattac
      601 aaatgcacag aaaagtcaac ttctatgaat agctactcaa agcctcaacc cactcattac
      661 tcttggtgtg tatatgatcc gaaatgaacc aatcttagga tccaggaatc taagaaagaa
      721 gatgtagctt catttttttt ctggagtaga ctgtagaaag gagcacattc tgagcagtct
      781 caaacatcat tcttaatatg ctttctgact aaataaagca caacgcacca aaaaaaaaaa
      841 aaaacctcta tttttgttta ctcactgttc tggtgaattt ttatcaactt aacacaaacc
      901 taaacatacc tgggaagagg gaattttaat tgagaaatta tctccatatg attggcctgt
      961 aggcaagcct ataataagtg tattttcttg attaatgatt gatgtgggag ggcctatccc
     1021 actggggggt agtgccactg ctgggctggt ggccctgagt gcattaggaa agcaggttga
     1081 gtaagccatt ggagaacaag ccagtaaaca tccatgtcat cttctacctc cagtttccag
     1141 tcttgagttc ctatccaaac tttcctggat aatgaactta aaagctgtaa gttgaaatga
     1201 attctttcct ccccatggtg ttttagccca tcagtaggaa cctaattagg acagtatata
     1261 actgcggtgt cagtgtgttt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtggtg
     1321 tggtgacaat aaggggaaag atatgaatct aaaaagaaca aggttatttg ggaggttctg
     1381 gagggagaaa agggaagggg gaaaggttgt aactataatc tctaatatta aataattttt
     1441 aaaacagaat caaaccaaag gttcatgaat ggtaggcaag taccatgaaa cacatctcca
     1501 gctctctaag aaacatgcat ttgcctaggc tctctaccaa aaccaggatt gggcctagga
     1561 ctccttcaaa gagcatttgt cctagcatgc ttaggaccct gacttggatc cccagcacca
     1621 gagggcaaca gagagaga
//
