LOCUS       NM_001039174            1344 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus cilia and flagella associated protein 300
            (Cfap300), mRNA.
ACCESSION   NM_001039174
VERSION     NM_001039174.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079425.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079425.1, EV779299.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMN12840111
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q11"
     gene            1..1344
                     /gene="Cfap300"
                     /note="cilia and flagella associated protein 300"
                     /db_xref="GeneID:654482"
                     /db_xref="RGD:1591894"
     exon            1..120
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..814
                     /gene="Cfap300"
                     /note="uncharacterized protein C11orf70 homolog"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 300"
                     /protein_id="NP_001034263.1"
                     /db_xref="GeneID:654482"
                     /db_xref="RGD:1591894"
                     /translation="MATGEPRDRGGYYFRFLPQRTFSSLSAREITNRLRQWSMLGRIQ
                     AQAFGFDQTFQPYQKDDFVTAFFKDPNVIPHLQLLAESSGQWTTLGTEVKRIEAINVP
                     CTQLSMSFFQRLYDENIVRESGHIVKCLDSFCDPFLISDELRKVLLMEDSEKYEVFSP
                     VEREEFLFCLFKHLCLGGSLCQYEDVLKPYLETAKLIYKDLVSVRKHPRTKEIQITSS
                     VFKVKAYDSLGVCYPSPKEHEQTFSYFVVDPIKRHVNVLYHCYGVGEMA"
     exon            121..202
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     exon            203..278
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     exon            279..445
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     exon            446..618
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     exon            619..685
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
     exon            686..1318
                     /gene="Cfap300"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtaagcacg atggcgactg gggagccgcg ggatagaggc ggctactact tcagattcct
       61 acctcagaga accttctcgt ccctgagcgc ccgggagatc accaacaggc tccgccagtg
      121 gtccatgttg ggaagaatcc aggctcaggc gttcggcttc gaccagacgt tccagcccta
      181 ccaaaaggat gattttgtca cggctttttt caaagaccca aatgttatcc cacatttgca
      241 gctactcgca gaatcttctg gacagtggac tacattaggc actgaagtga aaagaattga
      301 agctataaat gttccatgca cacaactttc aatgtcattt ttccagcggt tatatgatga
      361 aaatattgta cgagaaagtg gacacattgt caagtgccta gattctttct gtgatccgtt
      421 tctcatttca gatgaactga gaaaagtttt gctcatggaa gactcagaaa aatatgaagt
      481 cttcagccca gtggaaagag aagagttcct gttctgtctt tttaagcatc tctgcctcgg
      541 agggtccctt tgtcagtatg aagatgtgct aaagccttat ctggagacgg caaagctgat
      601 ctataaggat ctggtgagtg ttcggaaaca tcctcgaacc aaggaaatac aaattacctc
      661 ttctgtcttt aaagtgaaag cctacgactc tctgggtgtg tgctaccctt cacctaaaga
      721 acatgagcag acattctcat atttcgttgt ggaccccatc aagcgacacg tgaatgtcct
      781 gtatcattgc tatggtgtag gggaaatggc ttagtgctgt ttataagcca tctgttagca
      841 ctgctcctta gttcatggtg tctctgtgtt agccctaatg ggtagataaa agggctcttt
      901 gcagaccaat caaaggccac tgtaaagagc ccattttgag ctgaagagag caaacaccaa
      961 agtgcctttc tctaaatttg tccaacatac tcatgctaga atccccgata gatctgtacc
     1021 aagtagaaag tcacaggttc atgttcattc tgttaagatg cagccacatc cctaatttcc
     1081 ttctttaaaa attgttttta gttttttgag gtagtgtctc atgtacccta ggataggtga
     1141 gccttgaatt cagtatgtag ctgaggatag tcttgaactc ctgattctct tgcctctacc
     1201 tcttgagtgt tgtaatacaa acatgtacca ccaggcctgg ctctatgtta ctgtttggga
     1261 agctaattga ttctggatta gaatagaaac attaaacatc tctaccacca gccattaaaa
     1321 aaaaaaaaaa aaaaaaaaaa aaaa
//
