LOCUS       XM_008769275            5550 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cilia and flagella associated protein
            251 (Cfap251), mRNA.
ACCESSION   XM_008769275
VERSION     XM_008769275.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769275.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008769275.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5550
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5550
                     /gene="Cfap251"
                     /note="cilia and flagella associated protein 251; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 43 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:304498"
                     /db_xref="RGD:1564948"
     CDS             1106..4696
                     /gene="Cfap251"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 251"
                     /protein_id="XP_008767497.2"
                     /db_xref="GeneID:304498"
                     /db_xref="RGD:1564948"
                     /translation="MSDKEEKPLAESRESGDMDKEEEGEEEEEEEEYNPSFEEDRLQQ
                     SLTEGTLSWEESQEDGEGLEGKWIEKEEQIEGKEVRGEEEEMRGKEEREERWEEEETG
                     EEEKSEEKEGSKEKGGEEEEKVEEEKEKSGEEGKDIVLEKTEESKKYETPIRVGDIVI
                     SSESSTSIYSVAGTPESSKSSLHSQSPEVSEIYQDVSMKMDSLEEAVVGSQEEIGQES
                     EGISDQEKEEARFGKPFFPMEERQKLFQSKDLGAKESLVSTSTEDTLFQKEDDSKMYP
                     LSLTWSFGWNSSLPVYYMREDRRILLYVCGHTAVIYNVFKNSQYHLQGHPNIISCFCV
                     SEDRRWIATADEGPDCLIIIWDAFTGIPVHTIFDSCPEGNGIRSIAITRDSKFLATIS
                     DAENQKVCIWKWTLAVETPTCMLELPKEYGFQEHLIFNPVNNKELVSNSKTQAVYYSW
                     FEDKGILTHSAPLLTEKTFNKLVGKFSQSVFHLKLPQILSATKEGKLVVWDIHYPWAS
                     STSASSSAAEAEADADSASADSAVSEFPFMKPRKLVHLQKEAITVLTTIDSYIVTGDI
                     KGNIKFYDHTFSIVNWYSNFKLGAIRTLSFSKTLPSPPTEKSNLPTDCTLRGDLFVVR
                     NFIIGTFDATVYHMTVDGTKLEKLFVEPRDAVHAISCHPYQPLIAVGSVCGIIKVWDF
                     EKKVYLFSRTFEKGLGVQSLTYNPEGALLGAGFTEGTVYILDAMSLENETSEPFKYSR
                     SSVSHVSFSHDSNYMATADISFTVAVYMMVVKNGQRVWEYLARLRAHHNSIRSLLFGI
                     HLDSNEPRLLSLGTDRFLIEYNLTKSYKDHLEVLDIHRTDQGNYPTCMIWYPPLTKEL
                     FLLICNSGYKVKLFNATTKMCRKTLLGPAYGSPIEHAQVLPVKSTLELQKRYLVFINR
                     DKVGLQILPVDGNPHKTCAIVCHPNGVSGLALSYDGHFAFTAGGQDRSVVQWKINLGA
                     LEAAVSLGGEDLTPFYGLVSGGREGKFYRELEDYFYYSQIRTQGIDTMETRQVSEHIC
                     LSELPFVMRAIGFYPSEEKIEDMFNEIKFSEYVDTGKLIDKINLPDFLKVYLNHRPPF
                     GNTFDGIQKSFDVLGFTNSEGKKAIQREDFLNMLLTKGEHMTEEEMFDCFATLFGLSP
                     EGWKSEPAASCTKGPEICLEKELPEEITAEIFTTEILGLTLSNHSEQSDQ"
ORIGIN      
        1 tcaacacaaa catcactaat ggacttaacc aagctgaaat gtttcgtgct aacagcaaga
       61 tgatgcccgc cacatagctt caatcccagt tagctaaact ctgcatgctg tgccctggcg
      121 agaaggtggg cggttgggtg cagcctttgt gaggccagaa cattgggttt agtgctggga
      181 gaatcttgct aagtgattca ccatttcttg catggcttcc tggagaggca tgagcacaca
      241 tctgtttacc ttgcactgac agggaactga aggaacgaat cacccaaatc agcccggtgg
      301 acaagtgagc cttctcgggt tactcagagg agaaaacccc acggcactgt ggatgtacaa
      361 ctccaggcag ctccccggaa ctctttcaca cagagtaaag tcttgtgtgg cccaggctgt
      421 cttggaccct tgtggcttca tctccctagt tctgggttcg caggtgtgac atcacacctg
      481 acccatcgtc taattttgat ttatgcattt agtattcgtt cattcactca tccatttatt
      541 ttactgcttt tatgaccccc aggaagggct gagggattcc ccacccccca cctccgagtt
      601 ttccgagcat gcctctaccc tccgaatgcc cagtctgaag aaaataacta caaacacttt
      661 ttcattacgt cttgtccaac tctgggaaag tcagaattgc cagtgtgggg agtagctcta
      721 gcgaagtgcc ctataggaaa aagctagagc gagagcggct aacccagcag ggggcaggct
      781 gggccggttg gaggccgctt tctgggcacg tgattaccat cccgcttcct ggctttcctg
      841 ccgggcgcga ctagctgttg ccatagggat ggagcttggt tggcaacggt cactagggag
      901 tatggacagg agccactggc gatctcttgg gattcctcga ggcaggacga cccaaggctt
      961 ttgaggaaag acgtgggagc gaccctgaag gaaccagaac tgtttctgcc cgtttcgacg
     1021 tgttagcaca tcaggaagct ggcataggaa acagaggggc ctgctgaatt tatgtcaaat
     1081 tttctgtaga ggaaactaca gaagaatgtc agataaagaa gaaaaacccc tggcagaatc
     1141 cagagaaagt ggagacatgg acaaagagga ggagggggag gaagaagaag aagaagaaga
     1201 atataatccg agttttgaag aagatcgttt gcagcagagc ctaactgaag gcactctgtc
     1261 ctgggaggag tctcaggagg acggagaggg actggagggg aagtggatag agaaggagga
     1321 acagatagag ggaaaggaag tgagagggga ggaggaggaa atgagaggga aagaagaaag
     1381 agaagagaga tgggaggaag aggagacagg ggaagaggaa aaaagtgagg aaaaagaggg
     1441 aagtaaggaa aagggaggtg aggaagagga gaaggtagag gaggagaaag agaagagtgg
     1501 ggaggagggg aaagatattg tcttagagaa aacggaggaa tcgaaaaagt atgaaacacc
     1561 aatccgcgtg ggtgacattg tcatcagctc cgagtcttcc acatcaatat actcagtggc
     1621 cggaacccca gaaagcagca agtcatcctt gcactcccaa agtcctgaag taagcgagat
     1681 ttaccaagat gtcagtatga aaatggactc cttggaagaa gctgtcgtcg ggtctcagga
     1741 ggaaattggc caggagtcag aaggcatttc agaccaagaa aaggaggaag caagattcgg
     1801 gaaaccattc ttccccatgg aagaaagaca aaaattattc cagtccaaag acctgggtgc
     1861 caaggagtca ctggtgtcca cctccacaga ggacacattg ttccagaagg aggacgactc
     1921 caagatgtac cctttgtcct tgacttggtc ctttggctgg aacagttctc tccctgtgta
     1981 ctacatgcgg gaagacagga gaatccttct ctacgtctgc ggccacactg ccgtcatcta
     2041 caacgtcttc aagaacagcc agtaccatct ccagggccac cctaacatca tctcgtgctt
     2101 ctgcgtcagc gaagacaggc gatggattgc cacagccgac gaaggaccag actgcctcat
     2161 aattatatgg gacgccttca cgggaatccc tgtgcacacc atatttgaca gctgtccaga
     2221 aggtaatggc ataaggtcaa tagccatcac ccgtgactcc aagtttctgg ccaccatctc
     2281 agatgctgaa aaccagaaag tgtgcatctg gaagtggact ttggcagtgg agacgcccac
     2341 atgcatgctc gagcttccca aagagtatgg tttccaggaa cacctcatct tcaacccagt
     2401 caacaacaaa gagctggtga gcaatagcaa gacgcaggcc gtctactatt cctggtttga
     2461 agacaagggt atacttacgc acagtgcccc gcttttaaca gagaaaacgt tcaacaagct
     2521 tgtggggaag tttagccagt ctgttttcca cttgaagtta ccacaaatcc tgtcggctac
     2581 gaaggaaggg aagctggttg tctgggatat ccactatccc tgggcctcct ccacttctgc
     2641 ctcctcctcc gccgccgaag ccgaagccga cgccgactcc gcttccgcag actccgcagt
     2701 ctccgaattc cctttcatga agccgcggaa actggtccat ttacagaagg aggccatcac
     2761 agtgcttacg acaatcgaca gctacatcgt cacgggcgac attaaaggca acattaagtt
     2821 ctacgatcac accttctcca ttgtcaactg gtatagcaac ttcaaactgg gcgccataag
     2881 aactctgtcc ttctcaaaga ccctgccaag tccgccaacc gagaaatcca acctccccac
     2941 ggactgcacc ctaagaggcg accttttcgt tgtcaggaat tttatcatcg ggacatttga
     3001 cgccaccgtg taccacatga cagtggatgg caccaaactt gagaagctct ttgtggaacc
     3061 cagggatgct gtccacgcca tctcctgcca cccgtaccaa cccctcatcg cagtcgggag
     3121 tgtctgtggg ataatcaagg tgtgggactt cgagaagaag gtctatctgt tcagcaggac
     3181 ctttgagaag gggcttggag tccaaagtct gacctacaac cccgaaggag ccctccttgg
     3241 agctggattc actgagggga cagtttatat tcttgatgcg atgtctttag aaaatgaaac
     3301 ttcagagccc ttcaaatatt ccagaagcag cgtgtctcac gtcagcttct cacacgactc
     3361 caattacatg gcgaccgccg acatcagttt caccgtggcc gtgtatatga tggttgtcaa
     3421 aaatggacaa agggtctggg aatatttggc gagactccgc gctcaccaca acagcatccg
     3481 cagcctcctg tttggtattc acctggacag caacgaaccc aggctgctga gccttgggac
     3541 agacagattc ttgatcgagt acaatcttac caagagctac aaagaccacc tggaggtcct
     3601 cgacattcac cggacagacc agggcaacta ccccacctgc atgatctggt acccgccgct
     3661 caccaaggag ctcttcctgc tcatttgcaa cagtggctac aaggtgaagc tcttcaatgc
     3721 caccacaaaa atgtgcagaa agacactcct tggaccggcg tacgggtcgc ctattgagca
     3781 tgcgcaggtg ctcccagtaa aatccacgct agagctgcag aagcgctact tggtgttcat
     3841 taacagggac aaggttggtc tccagatctt accagtggac ggcaacccac acaaaacatg
     3901 tgctatcgtt tgccacccaa atggggtgtc tggcttggcc ctttcctatg atggccactt
     3961 tgccttcaca gcgggaggcc aagatcgctc ggtggtgcag tggaaaatca acttaggtgc
     4021 cctggaggcg gccgtttccc tcgggggtga agacctgacc ccgttctacg gtctggtgtc
     4081 cggtggcagg gaaggaaaat tctacaggga gctggaggac tatttttact actctcagat
     4141 ccgcactcaa ggtatcgata caatggagac caggcaggtg tcggaacaca tttgcctgtc
     4201 ggagcttcct tttgtcatga gagcgattgg tttttaccca tcggaggaga agattgagga
     4261 catgtttaat gagatcaaat tcagtgaata cgtggacacc gggaagctga tcgacaaaat
     4321 caacttaccg gatttcctca aagtttatct caaccatagg ccgcctttcg gcaacacctt
     4381 cgatggcatc cagaaaagct ttgatgtgct tggtttcacc aattctgagg ggaaaaaggc
     4441 tattcagaga gaagatttcc tgaacatgct cctcactaaa ggcgaacaca tgacagaaga
     4501 ggagatgttt gactgttttg cgactctgtt tggcctgagt cctgaggggt ggaaatcgga
     4561 gcctgcagcc tcctgcacca aaggcccaga aatctgcctc gaaaaagaac ttccagagga
     4621 aatcacggca gaaatattca caactgaaat tctcggccta accctttcca accattcaga
     4681 acagtctgac cagtgacgtc attgacgacg ttggcagcac aaaggcgttc acgtgtgtgt
     4741 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgaattttc caagaggcgt tcctttttct
     4801 gtacatgccc gcccccacct taatctttgg agcattttag acattaaaaa caaatttttc
     4861 tgaggcagta gaattcacgg agttggccat tgcactgtct gtgaaagaga agagtgggca
     4921 gggcctggcg gctggatccc caggcctgaa ggagcctcag ccaaaggcat gtatgctcgg
     4981 tggacgtcac agtcacccgt tcatgcccca aaactgggag gaggtgttca gggcccctgg
     5041 gagtgccaga ctattttccc tctcagaaaa acacccaagc agttgtgcgt gaccatgaca
     5101 gcaagcatca ccggtcatgc ttaaccccgg cgacaactgc cccccccaaa aaaaaacaaa
     5161 acaaaatgca gaagcgacct gggtcccaca gactgcacgt gggccagaag ccacagggtc
     5221 cctgctcctg aatgatacaa atgacaaatg ctgttcaccc tcttacctcc tgccaggctg
     5281 cattgctcac agtgggcaaa agcgggggac attaggagac atctctaagt ttacagcgat
     5341 gtcttgttcc tgcactgtgg tgtaacgagt gaaagctaca gtctgcgttt ataattctct
     5401 cagttctgac tctctttcca gcaaccaccc tcagtggaac ctctccatct cactcagtcc
     5461 agtgtacctg cccaccccca ccagggcctt ctcagccact ttaaggaaac atttctttgg
     5521 gggaagggat taaactttct tttctttctt
//
