LOCUS       NM_001127486            1761 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cilia and flagella associated protein 210
            (Cfap210), mRNA.
ACCESSION   NM_001127486 XM_001058919 XM_230004
VERSION     NM_001127486.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On or before May 22, 2008 this sequence version replaced
            XM_001058919.1, XM_230004.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.16978.1,
                                           SRR26643429.11798.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-169               JAXUCZ010000003.1  74962329-74962497   c
            170-396             JAXUCZ010000003.1  74959507-74959733   c
            397-570             JAXUCZ010000003.1  74956133-74956306   c
            571-764             JAXUCZ010000003.1  74955824-74956017   c
            765-921             JAXUCZ010000003.1  74949472-74949628   c
            922-1061            JAXUCZ010000003.1  74947496-74947635   c
            1062-1254           JAXUCZ010000003.1  74943889-74944081   c
            1255-1419           JAXUCZ010000003.1  74935258-74935422   c
            1420-1761           JAXUCZ010000003.1  74928368-74928709   c
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q21"
     gene            1..1761
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /note="cilia and flagella associated protein 210"
                     /db_xref="GeneID:311113"
                     /db_xref="RGD:1308818"
     exon            1..169
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1761
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /note="coiled-coil domain-containing protein 173;
                     coiled-coil domain containing 173"
                     /codon_start=1
                     /product="cilia- and flagella- associated protein 210"
                     /protein_id="NP_001120958.1"
                     /db_xref="GeneID:311113"
                     /db_xref="RGD:1308818"
                     /translation="MQVRYGRRSGKAKERAGMESYEKEEIPYPPLLPSTVDLQQVTII
                     PHAEWERIRDSLNKLTREAAVLRAERTAKKNMHMKSQELVKHWTNTYAGMKEQKLRAK
                     QKRDEELEAERQILDLEEEIYKQGERKKAIENAKQYQFYQTERVKRFHSGLLLSRVMK
                     ERDVQIQYKKNAVKSDEKWEEQVKLNDAKALKEDQEKLEKQRRERVALAKDHLKQIKE
                     HEEEEETRKKSEEKDAEEIKRQNLLYEIEMKKKLSRKQEEIDASRKRFFDNMRDKNII
                     RAVEQQQQEEEEEKTRKFIKAKKRLIQMRKDKEAETHRLMEERRERINNFLSKLIKEK
                     LDTEDLIMSRDIADIDTELDKREKEKHEKMQADLKAIAEHRASVMKNKEEEEKQRKIE
                     SKEELQAVLKADKMFQELEKEKKLKANKEKLEVQDAHIHQIALNKFNSKQLKEEDLNY
                     WRLTEALAVEKEKEFEKYAREVINFESESTKKYTYPMVKAVQEGVGGGRGPPFVGRGG
                     IRPSYQANDVTGVQLPFYNSQGSKYDFQKSKRRLGFTW"
     exon            170..396
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            397..570
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            571..764
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            765..921
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1061
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1254
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            1255..1419
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
     exon            1420..1761
                     /gene="Cfap210"
                     /gene_synonym="Ccdc173; RGD1308818"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actacgtcac ttccgacgtg gttgctaaac aaccaaatgg tttatctacc attcagtcgc
       61 tgacttcagc ttgaaaatag tctcacaggc tctggactca cagggctcag cttgttagag
      121 atgcaggtgc gctatggaag gcgctccggg aaggcgaagg aaagggcagg aatggagagc
      181 tatgaaaaag aagagattcc ctatccacct ctcctaccta gcacagtaga tctccagcag
      241 gtcaccatca ttccacatgc tgagtgggaa aggattcggg atagcctcaa caagttgaca
      301 agagaagcag cggtccttcg tgcagaaaga acagcaaaga aaaatatgca tatgaaatcc
      361 caagaattgg taaaacactg gactaacaca tacgcaggaa tgaaagaaca gaaacttaga
      421 gccaagcaga agcgtgatga agagcttgag gctgaaagac aaattcttga tctggaggaa
      481 gaaatataca aacaaggaga aaggaagaag gccatcgaaa atgcaaagca gtatcagttt
      541 taccagacag agagagtgaa acgctttcat tcaggacttc ttctcagtag agttatgaaa
      601 gagcgtgatg tccagattca gtacaaaaag aacgcagtaa aatcagatga aaaatgggag
      661 gagcaagtga aactcaacga tgcgaaagct cttaaagaag accaagagaa actagaaaag
      721 cagcgcagag aaagagtagc tcttgccaaa gatcacctga aacaaataaa ggaacatgaa
      781 gaggaagaag aaacaaggaa gaaaagtgaa gaaaaagatg ccgaggagat aaagcggcag
      841 aatttgctgt atgaaatcga gatgaaaaaa aaactaagca ggaagcagga agagatagat
      901 gcaagcagga agcggttttt tgataatatg cgtgataaaa acatcatccg agctgtagaa
      961 cagcagcagc aagaggaaga agaggaaaag actagaaagt ttatcaaagc caaaaaacgt
     1021 cttatacaaa tgaggaaaga caaagaagct gaaacacaca ggctaatgga agaacggaga
     1081 gaaagaataa ataatttcct aagtaaacta ataaaagaga aacttgatac tgaagatttg
     1141 attatgtcta gagatattgc tgacattgac actgagctgg acaaaagaga aaaagaaaaa
     1201 catgaaaaaa tgcaagcaga cttgaaagca attgcagaac atagagcctc tgtgatgaaa
     1261 aataaagagg aagaagaaaa acaaaggaaa atagagtcta aggaagaatt gcaggctgtc
     1321 ttgaaggcag ataagatgtt ccaggagctt gaaaaggaga aaaaactcaa agctaacaaa
     1381 gagaaactgg aagttcaaga cgctcacatt caccaaattg ccctaaataa gtttaattca
     1441 aaacaattga aggaagaaga cttaaattat tggagactta ctgaagccct tgcagttgag
     1501 aaggagaaag aatttgagaa gtatgccaga gaagtaatta attttgaatc tgaatcaaca
     1561 aagaaataca cctaccctat ggtaaaagct gtgcaggaag gagtgggagg tggacgtgga
     1621 ccaccctttg taggcagagg tgggataaga ccaagctatc aggcaaatga tgtcactggc
     1681 gtccagctcc ctttttataa cagtcaagga tcaaagtatg attttcagaa gtcaaagaga
     1741 aggctaggtt ttacttggta a
//
