LOCUS       NP_001386110             193 aa            linear   ROD 30-APR-2025
DEFINITION  cilia- and flagella-associated protein 20 isoform 1 [Rattus
            norvegicus].
ACCESSION   NP_001386110 XP_006255145
VERSION     NP_001386110.1
DBSOURCE    REFSEQ: accession NM_001399181.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Mendes Maia,T., Gogendeau,D., Pennetier,C., Janke,C. and Basto,R.
  TITLE     Bug22 influences cilium morphology and the post-translational
            modification of ciliary microtubules
  JOURNAL   Biol Open 3 (2), 138-151 (2014)
   PUBMED   24414207
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Ishikawa,H., Thompson,J., Yates,J.R. 3rd and Marshall,W.F.
  TITLE     Proteomic analysis of mammalian primary cilia
  JOURNAL   Curr Biol 22 (5), 414-419 (2012)
   PUBMED   22326026
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Laligne,C., Klotz,C., de Loubresse,N.G., Lemullois,M., Hori,M.,
            Laurent,F.X., Papon,J.F., Louis,B., Cohen,J. and Koll,F.
  TITLE     Bug22p, a conserved centrosomal/ciliary protein also present in
            higher plants, is required for an effective ciliary stroke in
            Paramecium
  JOURNAL   Eukaryot Cell 9 (4), 645-655 (2010)
   PUBMED   20118210
REFERENCE   5  (residues 1 to 193)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Jan 4, 2022 this sequence version replaced XP_006255145.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.316708.1,
                                           SRR26360194.973554.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19p13"
     Protein         1..193
                     /product="cilia- and flagella-associated protein 20
                     isoform 1"
                     /note="gene trap locus 3 protein homolog; UPF0468 protein
                     C16orf80 homolog"
                     /calculated_mol_wt=22617
     Region          1..185
                     /region_name="CFA20_dom"
                     /note="CFA20 domain; pfam05018"
                     /db_xref="CDD:461521"
     CDS             1..193
                     /gene="Cfap20"
                     /gene_synonym="Gtl3"
                     /coded_by="NM_001399181.1:227..808"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:307642"
                     /db_xref="RGD:1308493"
ORIGIN      
        1 mfkntfqsgf lsilysigsk plqiwdkkvr nghikritdn diqslvleie gtnvsttyit
       61 cpadpkktlg iklpflvmii knlkkyftfe vqvlddknvr rrfrasnyqs ttrvkpfict
      121 mpmrlddgwn qiqfnlsdft rraygtnyie tlrvqihanc rirrvyfsdr lysedelpae
      181 fklylpvqnk akq
//
