LOCUS       NM_001100581            1416 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus cilia and flagella associated protein 161
            (Cfap161), mRNA.
ACCESSION   NM_001100581 XM_001063041 XM_218852
VERSION     NM_001100581.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158775.1.
            
            On or before May 31, 2008 this sequence version replaced
            XM_001063041.1, XM_218852.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158775.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..1416
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /note="cilia and flagella associated protein 161"
                     /db_xref="GeneID:308794"
                     /db_xref="RGD:1310371"
     exon            1..74
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     CDS             6..917
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /note="uncharacterized protein C15orf26 homolog"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein 161"
                     /protein_id="NP_001094051.1"
                     /db_xref="GeneID:308794"
                     /db_xref="RGD:1310371"
                     /translation="MARNVYGPGVRMGNWNEDVYQEEERLRHFLEKREKGELLIQRNR
                     RLKKHILRPLQLSVSEDGYVHYGDKVILVNPDHVLTEEAGVFMRGDLSLCMSPDEIKA
                     QLNDDLEIPCGVTAVPTIAPIGRNTFTILSNNANSCNVGQVVVYGQDFCLGIPAGLEG
                     KMLYLTSDHRTLLKSSVKSWLQEVTLTDTVTHLNWWQAAFLNPQLRLEYEGFPVRANE
                     KIVIYHRHTNRALAVHRNLSLRTYFGKEAEVAAHTHFDPHRVEKPKNHWMLVTGNPRN
                     KSNTMLDISKPIAVDTRAVEQAMGINT"
     exon            75..164
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     exon            165..400
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     exon            401..491
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     exon            492..650
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     exon            651..724
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
     exon            725..1392
                     /gene="Cfap161"
                     /gene_synonym="RGD1310371"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcaatggc gcggaatgtg tatggtcctg gagtgcggat gggcaactgg aacgaagatg
       61 tctaccagga ggaggagcgc ttgcgacact tcttagagaa gagggaaaag ggagagcttc
      121 ttattcagag aaacagaaga ctgaagaagc acattttgag accgttgcag ctttcggtat
      181 ctgaagatgg ctatgtccac tatggtgaca aagtgatcct tgtgaatcct gaccatgtcc
      241 tgacggagga agctggcgtg tttatgagag gagacctgag cctgtgtatg agcccagatg
      301 aaattaaagc acaacttaac gatgacttag agataccatg tggtgtgact gctgtgccga
      361 ccatcgcccc gataggcagg aacaccttca ccattttgag taacaatgct aacagctgca
      421 atgtgggcca agtggttgta tacgggcagg acttctgtct ggggatacca gcaggactgg
      481 aaggcaagat gctgtattta acaagtgacc acaggaccct tctgaagtct tctgtgaagt
      541 cctggctcca ggaggtgact ctgacagata cggtcaccca tctgaactgg tggcaggctg
      601 ccttcctcaa cccccagctg cgcttggaat atgaaggctt cccagtcagg gcaaatgaaa
      661 agattgtcat ctatcatcgt cacacaaatc gagccctggc agtccaccgg aatctctcct
      721 taaggaccta ctttgggaag gaagctgagg ttgccgctca cacacatttt gatccacaca
      781 gagttgaaaa acccaagaac cactggatgc tggttactgg aaatcccaga aataagtcca
      841 acaccatgct agacatctct aaacctattg cagtggatac ccgggccgtg gagcaggcca
      901 tgggcatcaa tacatagtga cgtaccaggc attcgtgtgg ctcttgtcag ctgcaggtct
      961 taaaagaaag gaacaatctt cttggttgta ccccaagcag ttttacagta ggtgaagaat
     1021 tccatgaata catcattaaa agacatacca cattaaaatt actaaattga tgttgggagc
     1081 ctggctctgg ggagcaaata gtgtttgaaa atgaattgta tttgagatta agtcagcttt
     1141 tgttgatatc ccaattgtga agaacttagt gccccccttc agagcccctt gcctacagga
     1201 ccaacgaggc ctgtgctcct ttccaaaact gggtttatgc aataaagagg tcagaagttt
     1261 gcggatgttt tgacactgct gtttgtcccc taattttctt ctgtgtagaa caatgtgtag
     1321 ctatgagatg aagctttgcc ttggaattaa aatcccccta ccactgaatt cttggtgctg
     1381 ggataaaatg caaaaaaaaa aaaaaaaaaa aaaaaa
//
