LOCUS       NM_001191842             936 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus centrin 3 (Cetn3), mRNA.
ACCESSION   NM_001191842 XM_342168
VERSION     NM_001191842.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Van de Mark,D., Kong,D., Loncarek,J. and Stearns,T.
  TITLE     MDM1 is a microtubule-binding protein that negatively regulates
            centriole duplication
  JOURNAL   Mol Biol Cell 26 (21), 3788-3802 (2015)
   PUBMED   26337392
REFERENCE   2  (bases 1 to 936)
  AUTHORS   Karlstetter,M., Sorusch,N., Caramoy,A., Dannhausen,K.,
            Aslanidis,A., Fauser,S., Boesl,M.R., Nagel-Wolfrum,K., Tamm,E.R.,
            Jagle,H., Stoehr,H., Wolfrum,U. and Langmann,T.
  TITLE     Disruption of the retinitis pigmentosa 28 gene Fam161a in mice
            affects photoreceptor ciliary structure and leads to progressive
            retinal degeneration
  JOURNAL   Hum Mol Genet 23 (19), 5197-5210 (2014)
   PUBMED   24833722
REFERENCE   3  (bases 1 to 936)
  AUTHORS   Umlauf,D., Bonnet,J., Waharte,F., Fournier,M., Stierle,M.,
            Fischer,B., Brino,L., Devys,D. and Tora,L.
  TITLE     The human TREX-2 complex is stably associated with the nuclear pore
            basket
  JOURNAL   J Cell Sci 126 (Pt 12), 2656-2667 (2013)
   PUBMED   23591820
REFERENCE   4  (bases 1 to 936)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   5  (bases 1 to 936)
  AUTHORS   Muhlhans,J., Brandstatter,J.H. and Giessl,A.
  TITLE     The centrosomal protein pericentrin identified at the basal body
            complex of the connecting cilium in mouse photoreceptors
  JOURNAL   PLoS One 6 (10), e26496 (2011)
   PUBMED   22031837
REFERENCE   6  (bases 1 to 936)
  AUTHORS   Trojan,P., Rausch,S., Giessl,A., Klemm,C., Krause,E.,
            Pulvermuller,A. and Wolfrum,U.
  TITLE     Light-dependent CK2-mediated phosphorylation of centrins regulates
            complex formation with visual G-protein
  JOURNAL   Biochim Biophys Acta 1783 (6), 1248-1260 (2008)
   PUBMED   18269917
REFERENCE   7  (bases 1 to 936)
  AUTHORS   Giessl,A., Pulvermuller,A., Trojan,P., Park,J.H., Choe,H.W.,
            Ernst,O.P., Hofmann,K.P. and Wolfrum,U.
  TITLE     Differential expression and interaction with the visual G-protein
            transducin of centrin isoforms in mammalian photoreceptor cells
  JOURNAL   J Biol Chem 279 (49), 51472-51481 (2004)
   PUBMED   15347651
REFERENCE   8  (bases 1 to 936)
  AUTHORS   Gavet,O., Alvarez,C., Gaspar,P. and Bornens,M.
  TITLE     Centrin4p, a novel mammalian centrin specifically expressed in
            ciliated cells
  JOURNAL   Mol Biol Cell 14 (5), 1818-1834 (2003)
   PUBMED   12802058
REFERENCE   9  (bases 1 to 936)
  AUTHORS   Sun,X., Ge,Y., Ma,J., Yu,Z., Li,S., Wang,Y., Xue,S. and Han,D.
  TITLE     The cloning and expression characterization of the centrosome
            protein genes family (centrin genes) in rat testis
  JOURNAL   Sci China C Life Sci 45 (6), 655-662 (2002)
   PUBMED   18762898
REFERENCE   10 (bases 1 to 936)
  AUTHORS   Middendorp,S., Kuntziger,T., Abraham,Y., Holmes,S., Bordes,N.,
            Paintrand,M., Paoletti,A. and Bornens,M.
  TITLE     A role for centrin 3 in centrosome reproduction
  JOURNAL   J Cell Biol 148 (3), 405-416 (2000)
   PUBMED   10662768
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_342168.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM090102.1, BG666074.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               JAXUCZ010000002.1  13825091-13825195
            106-241             JAXUCZ010000002.1  13826726-13826861
            242-356             JAXUCZ010000002.1  13829019-13829133
            357-548             JAXUCZ010000002.1  13834318-13834509
            549-936             JAXUCZ010000002.1  13837115-13837502
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q11"
     gene            1..936
                     /gene="Cetn3"
                     /note="centrin 3"
                     /db_xref="GeneID:170895"
                     /db_xref="RGD:620249"
     exon            1..105
                     /gene="Cetn3"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..592
                     /gene="Cetn3"
                     /note="centrin, EF-hand protein, 3 (CDC31 homolog, yeast);
                     centrin-3-like"
                     /codon_start=1
                     /product="centrin-3"
                     /protein_id="NP_001178771.1"
                     /db_xref="GeneID:170895"
                     /db_xref="RGD:620249"
                     /translation="MSLALRGELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDQA
                     IDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEE
                     ILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFI
                     AIMTGDI"
     exon            106..241
                     /gene="Cetn3"
                     /inference="alignment:Splign:2.1.0"
     exon            242..356
                     /gene="Cetn3"
                     /inference="alignment:Splign:2.1.0"
     exon            357..548
                     /gene="Cetn3"
                     /inference="alignment:Splign:2.1.0"
     exon            549..936
                     /gene="Cetn3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtggtcccc gaggccgtgg aggttggtgg ctgttgagcg gttctcgtgg taaagtcctt
       61 gagcggaaca cctctgtcgg aagagaaaat gagtttagct ctgagaggtg agcttgtagt
      121 agacaaaaca aaaaggaaaa aacgaagaga actctctgaa gaacagaagc aagaaattaa
      181 agatgctttt gaactgtttg ataccgacaa agaccaagcc atagattatc atgaattaaa
      241 ggtggcaatg agagccttgg gttttgatgt gaaaaaggcg gatgtattga agattcttaa
      301 agattatgac agagaagcca caggcaagat cacatttgaa gattttaatg aagttgtgac
      361 agactggata ctagaaagag atccacacga ggagatcctg aaagcattta aactatttga
      421 tgatgatgat tcaggaaaga taagcttgag gaacttgcgc cgtgttgccc gagagctggg
      481 tgagaatatg agcgatgagg agctccgggc catgatcgag gagtttgata aggacggcga
      541 tggggagata aatcaagagg aattcattgc tattatgact ggtgacatat aaagaattac
      601 aagactgaac accaaaatgt tgtggttacc atctctcttc tctttgtgtg cctggagccc
      661 tgtttaagaa aacaaaacaa aacaatccaa cctagttctt tttctgaaag gaacaaacca
      721 agcatccttt gtatgtatat ttcaatactg ttaagtttat gtcatcaatg tagtagttga
      781 cttcacattt ataatacatg tttatataaa gctttaaaac atcaaatcat gtggtgtata
      841 ttatttggag gcttctaaat ttatcattag ttaattgctt ttattttcat gcacagtttt
      901 tagatattta ttaataaaat acttatttta ttagta
//
