LOCUS       NM_001107096            2817 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus centrosomal protein 97 (Cep97), mRNA.
ACCESSION   NM_001107096 XM_001062300 XM_221540
VERSION     NM_001107096.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Kobayashi T, Kim S, Lin YC, Inoue T and Dynlacht BD.
  TITLE     The CP110-interacting proteins Talpid3 and Cep290 play overlapping
            and distinct roles in cilia assembly
  JOURNAL   J Cell Biol 204 (2), 215-229 (2014)
   PUBMED   24421332
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Jakobsen L, Vanselow K, Skogs M, Toyoda Y, Lundberg E, Poser I,
            Falkenby LG, Bennetzen M, Westendorf J, Nigg EA, Uhlen M, Hyman AA
            and Andersen JS.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   3  (bases 1 to 2817)
  AUTHORS   Spektor A, Tsang WY, Khoo D and Dynlacht BD.
  TITLE     Cep97 and CP110 suppress a cilia assembly program
  JOURNAL   Cell 130 (4), 678-690 (2007)
   PUBMED   17719545
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473967.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_221540.3, XM_001062300.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132264 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..2817
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /note="centrosomal protein 97"
                     /db_xref="GeneID:304007"
                     /db_xref="RGD:1307400"
     exon            1..104
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..2599
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /note="leucine-rich repeats and IQ motif containing 2;
                     centrosomal protein 97kDa"
                     /codon_start=1
                     /product="centrosomal protein of 97 kDa"
                     /protein_id="NP_001100566.1"
                     /db_xref="GeneID:304007"
                     /db_xref="RGD:1307400"
                     /translation="MAVARVDGALAPGEGSVVNWSGQGLQKLGANLPCDADVHTLILD
                     KNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTQLRVLNLPHNSIGCMEGLKDLV
                     HLEWLNLAGNNLKTMEQINSCSALQHLDLSDNNIPQIGDVSKLTALKTLLLHGNIITS
                     LRMAPAYLPRNLSILSLAENEIRDLNEISFLASLSELEQLSIMNNPCVMATPSIPGFD
                     YRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQGKGRSYRPGQHVQLVQYLATVCPL
                     ISALGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPIAAVETRVPRTPECSSPVQ
                     DFQESEPVLQINSWVGSSSNDDQLYAVKNNFLATTHATRYSRNDLHLEDIQTDEDKLN
                     CSLLSSESTFMPVASGLSPVSPTVELRLQGINLGLEDDDGTDEFTKGLEHQDLDKDRE
                     KSLWDSDVQMLKRKISTEGNEEAGLLPCPKSSIITALLKEDNHSLTSGGHSVSHTEPN
                     REEVMSPTTSEKFPCRIFTQRPVALGQDKVTLQKLNAAATKLQACWRGFYTRNYNPQA
                     KGVRYEIRLRRMQEHIVCLTDEVRRLRKERDEERVKNFVQEEAVRVLWNEVRALQAWQ
                     QTVEQRLVSWHSDVPPISSTLVSPKPPLLPQHQDPSSDQNSDWLIIEDDAPQEKSVPD
                     FPDSGFHSSLTEQVHCLQDSLDFEKSSVESSENSALGNSADTVKYVKDPDSEATAEEH
                     SDCSKESSTSEQDNTLLQQYLASVQQLDDADDRAGPDDMAGDNKRLLACSPERLGASD
                     SEAHRASPTLQEEISQTPENCKLNEEVQGQPPECDTAFQVLQVGVTV"
     exon            105..247
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            248..406
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            407..508
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            509..622
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            623..789
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            790..954
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1079
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1833
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            1834..1909
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
     exon            1910..2817
                     /gene="Cep97"
                     /gene_synonym="Lrriq2; RGD1307400"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactacatgc tctacagaac ggctgaggac ggttgccggg tgtcattagc aagcggcaag
       61 tatggcggtg gcgcgagtcg acggggcttt ggctccggga gaaggatcag tggtaaactg
      121 gtcagggcag ggactgcaga aattaggggc caacttgccc tgtgatgctg atgttcacac
      181 attgattctg gataaaaatc agattataaa actggaaaat ctggagaaat gcaaacagtt
      241 aatacagttg tcagtggcta ataatcgctt ggttcggatg atgggtgtgg ccaagctgac
      301 tcaactccga gtgttaaatt tacctcataa tagtattggc tgcatggaag ggctgaagga
      361 cctcgtccat ttggagtggc tgaatttagc gggcaataat ctgaagacca tggagcaaat
      421 caatagctgt tcagctctgc agcaccttga tttatcagac aacaacatac cccagatagg
      481 tgatgtatcg aaactgacag ctctgaagac cttgctttta catggaaata tcatcacttc
      541 tctcagaatg gcacctgctt atctacccag gaatctttcg atactgtctt tggcagaaaa
      601 tgaaatccga gacttaaatg agatctcatt tttggcctct ttaagtgaac tggaacagtt
      661 atcaatcatg aacaaccctt gtgtgatggc taccccgtcc attccagggt ttgactatcg
      721 accgtacatt gtcagctggt gtctgaatct cagagtgctg gacggatatg tgatttctca
      781 gaaggagagt ctgaaggctg aatggctcta tagtcaaggc aaggggagat cgtatcgacc
      841 tggccagcat gtccagcttg tccagtacct ggctacagtt tgtcctctta tttctgccct
      901 gggtcttcag actgcagagg atgccaaact ggagaagatt ctgagcaaac agaggtttca
      961 ccagaggcag ctgatgaacc agagccagaa tgaagagttg tctcctattg ctgctgttga
     1021 aacaagggtg ccccgtacac ctgagtgttc aagccctgtg caagatttcc aggaaagcga
     1081 acctgttctc caaatcaatt cttgggttgg gagcagcagt aatgatgatc agttatatgc
     1141 tgttaagaat aacttcctag ccactacaca tgctacaaga tactctcgga atgaccttca
     1201 ccttgaagac atacagacag acgaggacaa gctaaactgt agtctgctct cttcagagtc
     1261 cacttttatg ccagttgcat cggggctttc tccagtgtct cccactgtgg agctgaggct
     1321 acagggcatt aacttgggcc ttgaggatga tgatggtaca gatgaattca cgaaaggact
     1381 ggaacaccag gacttggata aggacaggga gaagtcttta tgggattcag atgttcaaat
     1441 gctgaaacgt aagatcagca cagaaggaaa tgaggaagct gggctgctac cttgtcccaa
     1501 gtcatcgatc atcactgctc tcttgaagga ggataaccac agtcttacat caggtggaca
     1561 cagtgtgtcc cacacagaac caaacagaga agaagtcatg tctcccacca cttcagagaa
     1621 atttccctgc aggattttta cccagagacc tgttgctttg ggacaagata aagtcaccct
     1681 tcagaaactg aatgcagctg ccactaagct tcaggcctgt tggcgaggct tttataccag
     1741 gaactacaac ccacaagcca aaggggtacg ctatgaaatc cggctacgca gaatgcagga
     1801 gcacattgtc tgcctgacag atgaagtgcg gaggttaaga aaagaaagag atgaagaacg
     1861 tgtgaagaat tttgtgcaag aggaggctgt cagggtcctt tggaacgagg taagggctct
     1921 acaggcttgg cagcagacag tggaacagcg tctagtttcc tggcattctg atgtgcctcc
     1981 tatatcaagt actctggtgt cacccaagcc tccgttactt ccacaacatc aggacccctc
     2041 ttccgatcag aattcggatt ggctcattat tgaggatgac gctcctcaag agaaatcagt
     2101 gccggacttt cccgactctg gttttcactc ctccctgaca gaacaagttc actgtttgca
     2161 ggattctttg gattttgaaa aaagttcggt agaaagcagc gaaaactccg cgttggggaa
     2221 ttccgctgac acagtgaaat acgtcaaaga cccagactca gaggccacag ctgaggagca
     2281 cagtgactgc agtaaggaaa gctccaccag tgagcaggat aacaccctgc tgcagcagta
     2341 tttagcttca gtccagcagc tggatgacgc ggatgacagg gcaggtcccg acgatatggc
     2401 gggagacaat aagcgtctcc tagcttgttc tccggaaagg ttgggtgcct ctgacagtga
     2461 ggctcataga gcatctccta ctttacagga ggaaattagc cagacaccag agaattgtaa
     2521 gttaaacgag gaagtccaag ggcagcctcc agaatgtgac actgcatttc aggtgctgca
     2581 agtgggtgtc actgtgtagc ctgtctgatt aactgggaag cagaaattcc ctttgatttt
     2641 ctgttttcac tttctttttg caggggagca accctgtacc ccattttgtt attctttagc
     2701 tacaacttgt attcttgtcc cacagttttt agatattagc tgttgaacta cgtattcatt
     2761 tttgttgtac tactgtacta aacaaaatat taaaaggaat atgcacttta tctctca
//
