LOCUS       XM_017588916            2632 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 89 (Cep89),
            transcript variant X1, mRNA.
ACCESSION   XM_017588916
VERSION     XM_017588916.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017588916.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2632
                     /gene="Cep89"
                     /gene_synonym="Ccdc123; RGD1311730"
                     /note="centrosomal protein 89; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     93 samples with support for all annotated introns"
                     /db_xref="GeneID:292811"
                     /db_xref="RGD:1311730"
     CDS             117..2495
                     /gene="Cep89"
                     /gene_synonym="Ccdc123; RGD1311730"
                     /codon_start=1
                     /product="centrosomal protein of 89 kDa isoform X1"
                     /protein_id="XP_017444405.1"
                     /db_xref="GeneID:292811"
                     /db_xref="RGD:1311730"
                     /translation="MLLSFRRNRRSQFNHIIHGFLPAASIAPKPAVPRTPPPRSPNPS
                     PERPRSALAAAILATTLTGQTVAIPQPRQRSRSESDASQVEKDSFIEPYATTSELRLR
                     QSWQNEPKRTSLPSFETLGYREDEDAETQVSSSCRESESTTWKDVGDGRGAAYAVPLR
                     RQRKVSSSQKLVRKGDASEQDWLSDSSSSSSTPQDTQQKDVKPSVPNLEDEKVPLCKK
                     TPPSPDVAGRIHQRYTKITKEKFDELKEETVHLYTANQALSLELSTLRQAMKDLQLKL
                     KIVEKDNRKLKETEKASSQEVVTPELLCLRKQSQDLVDENEGLKMIIHRLNVELSRYQ
                     TKFRPLSEEESSYIEGLPSKGPTPPWLVDIKYLSPLLLAYEDRMKEKDKLSTALEEEM
                     KTFRLRVQEVVRENEGLHQELTKRSPVTIEEWRQLQTQAELVLDENKLLIEQLEIQQT
                     KAKDTQQAHLRDVSKLTKQLVLLEAKTQSQEKQLMESKEQLESLEARCRELKTQLDSK
                     IAPDVHTSIVNELKSQLQKEEEKDSAEMEELMGKLTALQVQKKSLLLEKSSWATSNRA
                     LEAELELTRKANRRYQKKIGVLRKQVEKAMGKEMSAHQYLANLVGLAENVTKERDSLK
                     YLAQCLEIEKHGVLNKILKGNIRLGRLEERVKGYKKQAALKLGDIHHRLMEQQDDFAG
                     KAAQYQKEVKHLHHMLQRKQEVLDEALQQKRNMEGELEMVLESTAKENRRMRGLLQAA
                     LQRKGIQCATAPQDTCLSRLSQGDLLIGHDFSYGDVQLPATRVCQSLGESVA"
ORIGIN      
        1 gtttgtttta aagtcagggg tccgcgggag ctagactgtg gggagctgtg caggctgcgg
       61 ggctgtcttc cagccagtcc agcaccaggc gcctcagccc gcagccctca gccaggatgc
      121 tcctcagctt ccgcaggaac cgccggagcc agttcaacca catcatccat ggcttcctcc
      181 ctgcagccag cattgctccg aagccagctg tgccacgcac accccctccc cgaagcccca
      241 acccctctcc agagaggccc agatctgctc tggctgcagc catcctggca accaccttga
      301 ctggacagac agttgccatt cctcagcctc gccagagatc ccggtctgag agtgatgcct
      361 cccaagttga aaaggacagc ttcatcgagc catatgccac cacctcagag ctgaggcttc
      421 ggcaaagctg gcagaatgag ccgaaaagga cttccttgcc gtcctttgag acgttgggct
      481 accgggagga tgaagatgct gaaacacagg tgtccagcag ctgcagggag tcggagtcca
      541 ccacctggaa ggatgtggga gacggcagag gtgcagcgta cgctgtgcct ctcaggcgtc
      601 agcgaaaggt atcgtcgtca caaaagctgg tgagaaaagg tgatgcttct gagcaagact
      661 ggctttcaga ctcctcctcc tcctcctcca caccgcagga cactcaacag aaagatgtta
      721 agccctctgt tccgaatcta gaggatgaga aagtaccact gtgtaaaaag acccctccct
      781 ctccagatgt agctggtaga atacatcaaa gatatacaaa aataaccaaa gaaaagtttg
      841 acgagttaaa agaagaaaca gtgcatcttt acactgcaaa ccaagccctc agccttgaac
      901 tgagcactct gagacaggca atgaaggact tacagctgaa gctcaagata gtggaaaaag
      961 acaacaggaa gctgaaggaa acagaaaagg cctcctctca ggaagtagtc acacctgaat
     1021 tgctttgctt aaggaagcaa agccaagacc tggtggatga gaacgagggc ctgaagatga
     1081 ttatccatcg cctgaatgta gaactcagtc gctaccagac aaaattccgg cctttgtctg
     1141 aggaagagag ttcctatatt gaaggcctcc catctaaggg ccccacaccc ccctggttgg
     1201 tggatataaa gtacctctca cccctgttgc tggcttatga agacagaatg aaagaaaagg
     1261 acaaactcag caccgccctg gaggaggaaa tgaaaacctt tagactgcga gtccaagaag
     1321 tggtgaggga aaatgaaggc ttgcaccaag agttaactaa gagaagcccc gtcaccatcg
     1381 aggaatggag gcagcttcag actcaagcag agctggttct agatgagaac aagctcttga
     1441 tagagcagtt ggagatccag caaacgaaag ccaaggacac ccagcaggcg cacctccggg
     1501 acgtttctaa gctgactaaa caacttgtgc tcctggaggc aaagactcag agccaggaaa
     1561 agcagctcat ggaaagcaag gagcagctgg agagcttgga ggccagatgc cgagagctca
     1621 agacacagct ggatagcaag atcgcaccag acgtccacac atcaattgtc aatgaactaa
     1681 aaagccagtt gcaaaaggaa gaagagaaag acagtgctga gatggaggag ctgatgggaa
     1741 agctgacagc cctgcaggtg cagaagaaga gcctgcttct ggagaagagc agctgggcca
     1801 ccagcaacag agcactagag gctgagctgg agctcacacg caaggccaac aggcgatacc
     1861 aaaagaagat tggtgtcctc agaaagcagg tagaaaaggc catggggaag gagatgtccg
     1921 ctcaccagta cctggcaaac ctggtgggct tggcagagaa tgtcaccaag gaacgagaca
     1981 gtcttaagta tttggctcag tgtttagaga tcgagaagca cggggtcctc aacaaaatcc
     2041 tgaaaggcaa cattcgcctg ggcaggctgg aggaaagggt aaaggggtac aagaagcagg
     2101 cggcactgaa gctgggggac atccatcacc gcctgatgga gcagcaggac gactttgctg
     2161 gcaaagcagc ccagtaccag aaggaggtga agcacctgca ccacatgctg cagaggaagc
     2221 aggaggtcct ggatgaggca ctgcagcaga aaagaaatat ggaaggtgag cttgaaatgg
     2281 tcctggagtc cactgccaag gagaacagac ggatgcgggg ccttctccag gccgccctgc
     2341 agaggaaagg catacagtgc gccacagctc ctcaagacac ttgcttgagc cgcctctctc
     2401 agggagacct gctaattggc catgatttca gctatggtga cgtgcagctt cctgctacca
     2461 gagtctgcca gagtctgggg gagtctgtgg catagatctc ctgtctgagg tgtctgcctc
     2521 ctgcaggctg gtgggtgact tctctcccca tgcgggccaa tgtgacaagg aggcccatgg
     2581 aagccactga gtgtcacagg caagaatgaa ataaacctgc ccaggcatca ga
//
