LOCUS       NM_001014266            3000 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus centrosomal protein 83 (Cep83), mRNA.
ACCESSION   NM_001014266 XM_345815
VERSION     NM_001014266.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ye,X., Zeng,H., Ning,G., Reiter,J.F. and Liu,A.
  TITLE     C2cd3 is critical for centriolar distal appendage assembly and
            ciliary vesicle docking in mammals
  JOURNAL   Proc Natl Acad Sci U S A 111 (6), 2164-2169 (2014)
   PUBMED   24469809
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Joo,K., Kim,C.G., Lee,M.S., Moon,H.Y., Lee,S.H., Kim,M.J.,
            Kweon,H.S., Park,W.Y., Kim,C.H., Gleeson,J.G. and Kim,J.
  TITLE     CCDC41 is required for ciliary vesicle docking to the mother
            centriole
  JOURNAL   Proc Natl Acad Sci U S A 110 (15), 5987-5992 (2013)
   PUBMED   23530209
REFERENCE   3  (bases 1 to 3000)
  AUTHORS   Tanos,B.E., Yang,H.J., Soni,R., Wang,W.J., Macaluso,F.P.,
            Asara,J.M. and Tsou,M.F.
  TITLE     Centriole distal appendages promote membrane docking, leading to
            cilia initiation
  JOURNAL   Genes Dev 27 (2), 163-168 (2013)
   PUBMED   23348840
REFERENCE   4  (bases 1 to 3000)
  AUTHORS   Shultz,M.A., Zhang,L., Gu,Y.Z., Baker,G.L., Fannuchi,M.V.,
            Padua,A.M., Gurske,W.A., Morin,D., Penn,S.G., Jovanovich,S.B.,
            Plopper,C.G. and Buckpitt,A.R.
  TITLE     Gene expression analysis in response to lung toxicants: I.
            Sequencing and microarray development
  JOURNAL   Am J Respir Cell Mol Biol 30 (3), 296-310 (2004)
   PUBMED   12947022
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Aug 27, 2015 this sequence version replaced NM_001014266.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.38714.1,
                                           SRR26643296.19444.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-269               JAXUCZ010000007.1  31167367-31167635
            270-536             JAXUCZ010000007.1  31203244-31203510
            537-687             JAXUCZ010000007.1  31203961-31204111
            688-780             JAXUCZ010000007.1  31209804-31209896
            781-912             JAXUCZ010000007.1  31212408-31212539
            913-1164            JAXUCZ010000007.1  31222517-31222768
            1165-1296           JAXUCZ010000007.1  31224880-31225011
            1297-1411           JAXUCZ010000007.1  31232505-31232619
            1412-1556           JAXUCZ010000007.1  31233805-31233949
            1557-1706           JAXUCZ010000007.1  31234058-31234207
            1707-1782           JAXUCZ010000007.1  31246496-31246571
            1783-1940           JAXUCZ010000007.1  31248910-31249067
            1941-2070           JAXUCZ010000007.1  31250937-31251066
            2071-2174           JAXUCZ010000007.1  31272276-31272379
            2175-2364           JAXUCZ010000007.1  31274921-31275110
            2365-3000           JAXUCZ010000007.1  31275878-31276513
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..3000
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /note="centrosomal protein 83"
                     /db_xref="GeneID:366872"
                     /db_xref="RGD:1359593"
     exon            1..269
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            270..536
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     CDS             391..2469
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /note="coiled-coil domain-containing protein 41;
                     coiled-coil domain containing 41"
                     /codon_start=1
                     /product="centrosomal protein of 83 kDa"
                     /protein_id="NP_001014288.1"
                     /db_xref="GeneID:366872"
                     /db_xref="RGD:1359593"
                     /translation="MDTFPSIFPPGGDSRLNPEPEFQSMLIDERVRCEHHKHNYQALK
                     IEHKRLQEEYVKSQNELKRVLNEKQTNQEKFQLLLEELRGELVEKVKDMEAMKLQILT
                     PQKLELVKAQLQQELEAPMRERFRTLDEEVERYRAEYNKLRYEHTFLKSEFEHQKEEL
                     TRISEEEKMKYKSEVARLEKDKEELHNQLLSVDPTRDSKRVEQLVREKTHLLQKLKSL
                     EAEVAELRAEKENSGAQVENVQRIQVRQLAEMQATLRSLEAEKQSAKLQAERLEKELQ
                     SSNEQNTCLISKLHKADREISTLTSQVKELKHANKLEITDVKLEAARAKSELERERNK
                     IQSELDGLQSDNEILKSTVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEKLEL
                     ENRLSDLEKMKVEHDVWRQSEKDQCEEKLRASQAAEEAARRELQSIRLKLQQQIVNTE
                     KAEKEKLENSELKQQISHLQIQVTSLTQSENDLLNSNQMLKDMVERLKQECRHLRSQA
                     EKVQLEVEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAATAQKKRKSLHE
                     NKLKRLQEKVEVLEAKKEELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLI
                     LVPNMPPAASVNPANFQSSAIVPGVELSFPPHLQEEQHQRELSLLRKRLEELETTQRK
                     QLEELGSPGE"
     exon            537..687
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            688..780
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            781..912
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            913..1164
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1296
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..1411
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1412..1556
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1557..1706
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1707..1782
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1783..1940
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            1941..2070
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            2071..2174
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            2175..2364
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
     exon            2365..3000
                     /gene="Cep83"
                     /gene_synonym="Ccdc41; RGD1359593"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcaaccttc cctaggagtg ggtgccctcg ggtacagccc ggctcgttgg cttgtctcca
       61 cccccgcggc gggagcggcc gcctggaccg ctccagacgt ggcgggctgg gccgacaccc
      121 cagccggtgg gaccgtctgg acccctcggc cccaatgcct gagcgagcag agcggtgtgg
      181 gtggcggtgg tcggagctgt gccggggacc caggggggcg agcgcggctg ctgtgctagg
      241 gcacgctgct aggaccgtgt gtaagtttgg catgatttgg tcccctggga ttctgcctta
      301 gcaggaaaga agttggaaat acttcctgga aggaactaac acaatacaaa cgccacagct
      361 tagtccttac atgtcagcca ccttacaaat atggacacat ttcctagcat atttccaccc
      421 ggaggagaca gtaggctgaa tcctgaacct gagttccaaa gtatgttaat agatgaaagg
      481 gtacgatgtg aacatcataa acataattat caggctctga aaattgaaca caaaaggttg
      541 caggaagaat atgtaaaatc acaaaatgaa cttaagcgtg tgttaaatga aaaacaaaca
      601 aaccaggaaa aattccaact gctccttgaa gaattaaggg gggaattagt agagaaagtt
      661 aaggacatgg aagcaatgaa actgcagata ttaacaccac aaaaattgga attggtaaaa
      721 gcccaactac aacaagaatt agaagctcca atgcgagaac gttttcggac tcttgatgaa
      781 gaagtggaaa ggtacagagc tgaatacaac aagctccgct acgagcacac attcctcaag
      841 tcagagtttg aacaccagaa ggaagagctt actcgtattt cagaagaaga aaaaatgaaa
      901 tacaagtcag aggttgcacg actggagaag gataaagagg aactacataa ccagctgctt
      961 agtgttgatc ccacaagaga tagcaaacga gtggagcaac ttgttcgaga aaaaacccat
     1021 ttgcttcaga aattgaaaag tttagaggct gaagtagcag aattaagggc tgagaaagag
     1081 aattctggtg ctcaggtaga aaatgtccaa agaatacaag tgaggcagtt ggctgagatg
     1141 caggccactc tcagatcctt ggaggctgaa aagcagtcag ctaaactaca ggctgaacgc
     1201 ctagaaaaag agctacaatc aagcaacgaa caaaacacct gtttaattag taaattgcat
     1261 aaggctgacc gagaaataag cacgctgact agtcaggtga aagagcttaa acatgcaaac
     1321 aagctcgaaa taactgacgt caaactggag gctgcaagag cgaagagtga gctagagcga
     1381 gagaggaata agatccaaag tgaactcgat ggactgcagt cagacaatga aattctcaag
     1441 tcgactgttg aacaccacaa agtgctcttg gtggaaaaag atcgtgaatt aatacgtaaa
     1501 gtacaagctg ccaaggaaga aggttaccag aaacttgtgg tcttgcaaga tgaaaagcta
     1561 gaacttgaga acagattatc agacttagag aaaatgaaag tggagcatga tgtctggagg
     1621 cagtcggaaa aggatcagtg tgaagagaag ctgcgggcct cccaggcggc agaggaggca
     1681 gcccggaggg aactgcagag cattaggtta aaacttcaac aacaaattgt gaataccgaa
     1741 aaagcagaga aagaaaaact tgaaaattct gaactgaaac agcaaatcag tcatttacag
     1801 atccaagtga cctcactgac gcagtcagag aatgacttgc tgaattcaaa ccaaatgctg
     1861 aaggacatgg tggagaggtt aaagcaagag tgccgacatt taagaagcca agctgaaaaa
     1921 gtgcaactag aagttgaaaa gacactggag gaaaagcaga tacagtggtt ggaagaaaag
     1981 cataagcttc atgagcgtat cacagacaga gaggaaaagt acaatcaagc aaaagagaaa
     2041 ctgcagcggg cagcaactgc tcagaaaaag agaaaatctc ttcatgagaa taaattgaag
     2101 agactgcagg agaaagtgga agtcttggag gcaaagaaag aagaattaga gacagaaaac
     2161 caggtgttaa atagacaaaa tgttccattt gaagaatata caaggcttca gaaacgacta
     2221 aaggacatac agagaagaca taatgaattt cgaagtctaa tcttggttcc taacatgcct
     2281 cccgcagcat cggtcaatcc tgctaacttc cagtcctcag ctatagttcc tggagtggaa
     2341 ctctcctttc cccctcatct gcaggaagaa cagcatcaaa gagaactctc tctccttcgc
     2401 aaaagactgg aagagctaga aactacacaa agaaaacaac tagaggaact tggatctccc
     2461 ggggagtgat gctggaagaa aggcaaagcc agaaactcaa taaagtatga cgtttaacgt
     2521 gtggcctcca ggtgctttct tactgtttgc caaaattgag ctgcctcaag acaaggtact
     2581 agctatgcgc tgcactgcaa gggctccaag attttaggat aatactaaga aaaatgaagt
     2641 attcatatat ttaggacatg cattgataat cttttgacaa tgcaaaaata aaaggaacta
     2701 gttaattaaa aatcaagttt tcaaatttat taatttttat tttgttgata ttttctgaca
     2761 ttttgcttga aatatatcca tcctgaagtc ccttttcctt atctttgaaa tgtctccttg
     2821 gtaataacaa gatcagtaaa tatctccttt cctatatata aaagttttgg aaaagatggt
     2881 catttaaaag tataaaaaac acttaaaagt ttctaaacat gtatattata gaaatccttt
     2941 cctaaaagct gtgcatttaa tttattgaat aacttaataa atatttttgt atctatgcta
//
