LOCUS       NM_001400076            2488 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus centrosomal protein 72 (Cep72), mRNA.
ACCESSION   NM_001400076 XM_217737
VERSION     NM_001400076.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Kodani,A., Yu,T.W., Johnson,J.R., Jayaraman,D., Johnson,T.L.,
            Al-Gazali,L., Sztriha,L., Partlow,J.N., Kim,H., Krup,A.L.,
            Dammermann,A., Krogan,N.J., Walsh,C.A. and Reiter,J.F.
  TITLE     Centriolar satellites assemble centrosomal microcephaly proteins to
            recruit CDK2 and promote centriole duplication
  JOURNAL   Elife 4, e07519 (2015)
   PUBMED   26297806
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Hall,E.A., Keighren,M., Ford,M.J., Davey,T., Jarman,A.P.,
            Smith,L.B., Jackson,I.J. and Mill,P.
  TITLE     Acute versus chronic loss of mammalian Azi1/Cep131 results in
            distinct ciliary phenotypes
  JOURNAL   PLoS Genet 9 (12), e1003928 (2013)
   PUBMED   24415959
REFERENCE   3  (bases 1 to 2488)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   4  (bases 1 to 2488)
  AUTHORS   Oshimori,N., Li,X., Ohsugi,M. and Yamamoto,T.
  TITLE     Cep72 regulates the localization of key centrosomal proteins and
            proper bipolar spindle formation
  JOURNAL   EMBO J 28 (14), 2066-2076 (2009)
   PUBMED   19536135
REFERENCE   5  (bases 1 to 2488)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 20, 2022 this sequence version replaced XM_217737.9.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.126070.1,
                                           SRR26360181.2398256.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-118               JAXUCZ010000001.1  31053914-31054031
            119-246             JAXUCZ010000001.1  31056656-31056783
            247-439             JAXUCZ010000001.1  31057733-31057925
            440-548             JAXUCZ010000001.1  31061172-31061280
            549-727             JAXUCZ010000001.1  31070899-31071077
            728-934             JAXUCZ010000001.1  31072332-31072538
            935-1239            JAXUCZ010000001.1  31073589-31073893
            1240-1378           JAXUCZ010000001.1  31074893-31075031
            1379-1575           JAXUCZ010000001.1  31076521-31076717
            1576-1702           JAXUCZ010000001.1  31078090-31078216
            1703-1814           JAXUCZ010000001.1  31081495-31081606
            1815-2488           JAXUCZ010000001.1  31083190-31083863
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..2488
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /note="centrosomal protein 72"
                     /db_xref="GeneID:308064"
                     /db_xref="RGD:1566336"
     exon            1..118
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..1980
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /note="centrosomal protein 72kDa"
                     /codon_start=1
                     /product="centrosomal protein of 72 kDa"
                     /protein_id="NP_001387005.1"
                     /db_xref="GeneID:308064"
                     /db_xref="RGD:1566336"
                     /translation="MAPGQRLVLCEETVRERSGLGPHRDLAELRSLSIPGTYQEKITH
                     LGNSLMHLTALKSLDLSRNSLVSLEGIQYLVSLESLNLYYNCISSLAEVFRLHTLMEL
                     QDVDFRLNPVVKNESDYRLFVVHMLPKLRQLDDRPVRESERKASQLHFAPEDSLDSKE
                     NFSATLTVGRPHHLRNRCTETSAKKCLVMDADDEAVLNLIAECEWDLSNPPGNMSSSQ
                     KEHDADLHYAQESRHLLSPLSIQHQCGDSARRGHEKKKVTSRGCPGHSPQDQLCGELP
                     PQHGLPEACHLHVQHARIASQPDSVDVEDCASSSQKSTLPSQKIVNPLPVPEKYRKRR
                     MPGGRFQVPSDRECLSFLERADVPSSLEDSLSRQDGLEGQSQVALSHSEALEAEERTS
                     HGTSDPRVLSPKLCSAAAPERRSTLEMALLEALLDLIDRCSSGSGSLHGNEAFLAQAR
                     QVLSSLQEFTAARDGSALEKEGVGYLSLENKALQSRLTEQHQQYAAAVTKVTTELNNT
                     KRELDTLRQHLDNSLEENDNLKSLLYNVKQEVKHADTSGALSLQITGLQTSMKQLSGE
                     VMELKQHVAHYDKIQELTQMLQESHSSLVSTNEHLLQELSRARAQHRAEVEQMHWSFQ
                     ELKKTTALAPHRSSRLGGRQSC"
     exon            119..246
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            247..439
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            440..548
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            549..727
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            728..934
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1239
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            1240..1378
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            1379..1575
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            1576..1702
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            1703..1814
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
     exon            1815..2488
                     /gene="Cep72"
                     /gene_synonym="RGD1566336"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgcgcagg cgccacgcgc cggcgtcgag tttgaaaata tggcgccagg tcagcggttg
       61 gttttgtgcg aagagactgt ccgggagcgc agcggcctgg gtccccaccg cgacctggct
      121 gagcttcgat ctttatcgat tcccggaaca taccaagaga agattacaca cctggggaac
      181 tctctgatgc atttgacagc tctaaaatcc ttagacctct cacgtaactc cttggttagt
      241 cttgagggca tacagtatct cgtctctttg gagagtctca acctctacta caactgtatt
      301 tcttcactag cagaagtgtt taggctccac accctcatgg agctccagga tgtggacttt
      361 cggcttaacc ctgttgtgaa gaatgagtct gactaccgcc tgtttgtcgt gcacatgctc
      421 ccgaagctcc ggcagctaga tgaccgtcct gtgagagaga gtgagcggaa ggcttcccag
      481 cttcattttg ccccagagga ttcactggac tcaaaggaga acttctcagc cactttgaca
      541 gttggaagac cacaccacct cagaaacaga tgtactgaga cctcagccaa aaagtgcttg
      601 gtcatggatg ctgacgatga ggctgtcctg aaccttattg ccgagtgtga atgggaccta
      661 agcaatcctc ctgggaacat gagctccagc cagaaggaac atgacgctga cctccattat
      721 gcccaggagt ccagacatct gttgagtcct ttgtccatcc agcaccaatg tggggactca
      781 gcgaggcgag gccatgagaa gaagaaagtc acctccagag ggtgtccagg tcattcccca
      841 caggaccagc tctgtgggga gctcccccca cagcatggcc tgccagaggc ctgccatctg
      901 catgtgcagc atgcccgcat cgcttcacag ccagactctg tggatgttga agactgtgct
      961 tcatcttctc agaagtcaac tttgccatca caaaagatag taaatccttt gcctgtccct
     1021 gaaaagtaca ggaagcgaag gatgcctggg gggagattcc aggtgccttc agaccgggag
     1081 tgtttgagct tcctagagag ggctgacgtg ccctccagcc ttgaggacag tctaagcaga
     1141 caggatggct tggagggcca gagtcaggtg gccttgtctc actctgaggc tttggaggct
     1201 gaagagcgga catctcatgg cacaagtgac cccagagtgc tgtctcctaa actctgctcg
     1261 gcagcggcgc ctgagcgaag gtccactctg gaaatggcac ttctggaggc gctcctcgac
     1321 ctgatagaca ggtgctcgag tggcagtgga tccctgcatg gcaatgaggc tttcctcgct
     1381 caggccaggc aagttttgtc atctcttcaa gagttcaccg cagcgcggga cggttcagca
     1441 cttgagaagg aaggagttgg gtacctgtct ctggagaaca aggctctgca aagccgcctt
     1501 acggagcagc atcagcagta tgctgctgcg gtgaccaagg tgacgacaga gctcaacaac
     1561 acaaagaggg agctggacac attgagacaa catttggaca actcattgga agagaatgac
     1621 aacttgaaat ctcttctgta caatgtgaaa caggaagtga agcacgcaga cacgtcaggt
     1681 gcactgagtc tgcagatcac cggacttcag acaagtatga agcagctctc tggggaagtt
     1741 atggagctga agcaacacgt ggcgcactat gacaagatcc aggagctcac acagatgctt
     1801 caagagagcc acagctctct ggtcagcacc aatgagcatc tcctgcagga gctgagccgt
     1861 gcacgggcac agcacagagc tgaggtcgag cagatgcact ggagcttcca ggagctcaag
     1921 aagactacgg ccctggcccc acaccgtagc tcccgccttg gtggccggca gtcctgctag
     1981 ctgctagtga gctgtactcc agggttgtac ctgggcatgt atctgtctga ataccctcct
     2041 gagactgtaa ttaccttagg aacctcaaaa tgtattcgta agctcagctt gcttatgtgt
     2101 cctaaattga cgtaaccgcc ctggggcttc ttcacgtttg ggaagttttc attacacatc
     2161 ctgcgtaagg tacctgtagt tttttttttc ttcccaatgt gggaaaattc gtataattaa
     2221 aatgttttca tgtgacaaac attccttact taaagaaata atatattgct atgtttaaaa
     2281 gttaacccgt agatggctct ttataaatta taactgactt ccttattgaa ttcttctata
     2341 aaacaagttg tacaaagtga gaaggaagaa ataagttcca agttgaaata aaaagtaaac
     2401 ttagagatgt gacaaacatt ttaaaaactt gtatgatgtt aacgtgtcat agtaaaacaa
     2461 ataaaaaacc tccccacttg tgcctcaa
//
