LOCUS       XM_214106               6023 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 68 (Cep68),
            transcript variant X1, mRNA.
ACCESSION   XM_214106
VERSION     XM_214106.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 18, 2024 this sequence was replaced by
            NM_001427307.1.
            
            On Jan 21, 2021 this sequence version replaced XM_214106.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6023
                     /gene="Cep68"
                     /note="centrosomal protein 68; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 52
                     ESTs, 6 long SRA reads, 3 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 208 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:289822"
                     /db_xref="RGD:1309101"
     CDS             179..2383
                     /gene="Cep68"
                     /codon_start=1
                     /product="centrosomal protein of 68 kDa isoform X1"
                     /protein_id="XP_214106.4"
                     /db_xref="GeneID:289822"
                     /db_xref="RGD:1309101"
                     /translation="MSLGEDEAETKVSVNTEVPSCGRWDSGNLLSPGQEPEHLEVQGG
                     PQWRAEADPGCISGVFLSQTYTASKEPVAGRSEPPLSGPLPSASVGTGELLHPMGSQM
                     EENKPPASRDLLPAIKVLGTITVCSGREADSEDFQPAVAPSQVLGLGQQPHISGLPLL
                     SQWKPTVSPGAPQLSSRSISVSSVGSSLQDHLDKAEPQSGSFAHISSQELTVPQAAHS
                     VVGAGSPFQWSTQPVASGGDATGLGKRHLSFQAEYWACVLPNSLPPSPNRHSPLWNPN
                     KEYEDLLDYTYPLRPGPQLPKQLESHVLADPVMQDSGVDLDSFSVSPASTLKSPTNVS
                     HNCSSAEVPTLPLSGAREPCLERWPLGVSQKQGGASLASWNQLASTPRTPGTEGASWE
                     NREAALRGTTEDYLPRGKNASAGSPQLKTKEKGPPFPRGEREKTGRQSAGCPACVKPE
                     WPSEEEIGSDEEYLALPSRLTQVSSLVSYSGARPTYVNPPTGAAEGHRSLQVSDSDEP
                     ASPTLDSSQRQHPSGTTFQGPVGQSPCFGHSVQPQDSRGKSRLMSSQTLGVSAKQLKT
                     HPSSKAVSDKWLLSEPVAGEKLPRRIEEQEKASLLQCVQTFCCQLEELICWLYNVTDV
                     ADLSAPPRASLTGLKSSLQLYRQFKKDIDEHQSLTESVLEKGEILLQCLLDNTPVLKD
                     VLVRIAEQSGELESRADHLYDSILASLDKLAGCTLIPDNKPRAAAEHLHEGP"
ORIGIN      
        1 cacgggcgga gggcgtggcg ggcgctgggc cctcccagcc ccaggagtgc gggcgcccgc
       61 aggaggcccg tcgtcgctgc ttgggacccc ggcccagcta tcccagccgc ttgggacgtg
      121 cggcggcgcg gagtgaggtt cctgaaggct tcaaaggaaa cctgacaggg gaggctccat
      181 gtccctgggt gaagatgagg ctgagacaaa agtgtctgtc aacacagagg tcccatcctg
      241 tggcaggtgg gactctggga atctgctgtc cccagggcaa gaaccagagc atctggaagt
      301 ccagggaggg ccacagtgga gggccgaggc tgaccctggc tgcatctctg gagttttctt
      361 gtcacagacc tacactgcca gcaaagaacc agtagcaggc aggtctgagc ctcccctcag
      421 tggcccactt ccttctgcca gtgtgggaac tggagagctt ttacacccta tgggaagcca
      481 aatggaggaa aacaagcctc ctgcctcccg ggacctactt ccagctatta aagtccttgg
      541 aactataacc gtttgctcag gacgtgaggc tgacagtgaa gacttccagc ctgcagttgc
      601 tccatctcag gtgttgggcc ttggccagca gccacacatc tcaggtctcc ctctcctgtc
      661 ccagtggaag cccacggtga gcccaggcgc tcctcagctc tctagcagaa gcatctctgt
      721 ctcctcagtg ggcagcagtc tccaggacca cctagacaag gcagaacctc agagtggctc
      781 ctttgcccac atctcctctc aggagttgac tgtaccccag gcagcccact ctgtggtggg
      841 ggcagggtct ccattccagt ggtcaacaca gcctgtggcc tctggcggtg atgctacagg
      901 cctgggtaag agacacctct cctttcaggc agaatactgg gcctgtgtgc ttccaaattc
      961 tctgcctcct tcccctaacc gtcactctcc actctggaac ccaaataaag agtacgaaga
     1021 tctgcttgac tacacttacc ctctgaggcc tgggcctcag ctccccaagc aacttgaaag
     1081 tcatgtgctg gctgaccctg tcatgcagga ctcaggtgta gatctggaca gtttctctgt
     1141 ctccccagca agcactctca agtcacccac taatgtctcc cacaattgct catcagcgga
     1201 agtgcctact ctgccattgt ctggagccag agagccatgt cttgagcgct ggcccttggg
     1261 agtgtcccag aaacagggtg gcgcaagctt ggcatcctgg aaccagttgg catcgacccc
     1321 tagaacccca ggcacggaag gtgcttcttg ggagaacaga gaggcagccc tgaggggcac
     1381 aacagaggac tatctcccta gaggcaagaa cgccagtgcg ggctctcccc agctgaagac
     1441 gaaggagaaa ggaccaccct ttcccagagg agagagggag aagacaggca gacagagtgc
     1501 tggttgtcca gcctgtgtaa agcctgagtg gccatcagaa gaggagattg gaagtgatga
     1561 ggagtacctt gctctgccct ccaggctgac gcaggtctct agtttagtgt cctactcagg
     1621 tgccaggccc acctacgtga acccacccac tggggctgct gagggacaca ggtcactgca
     1681 agtgtcagac agtgatgagc cagcttcccc cacgctggac tccagccaaa ggcagcatcc
     1741 ttctggcact acctttcaag ggcctgtggg ccagagcccc tgcttcgggc attctgtcca
     1801 gccccaggac tctagaggta aaagtaggct gatgagcagc cagacccttg gggtctctgc
     1861 aaaacagctg aaaactcacc cctcctcaaa agctgtgtct gacaagtggc tgttgtcaga
     1921 gccagtggct ggagagaagc ttcccaggag aatagaagag caggagaaag cgtctctact
     1981 gcagtgtgtg cagacatttt gctgtcagct agaagagctg atctgctggt tgtataatgt
     2041 cacagatgtt gctgacctca gcgctccacc cagggccagc cttacaggtc tcaagtcttc
     2101 tctgcagctt taccggcaat ttaagaaaga tatagacgaa catcagtccc tgacagagag
     2161 cgtcttggag aagggagaga ttcttcttca gtgcctgctg gataacaccc cagttttaaa
     2221 ggatgtcctt gtgaggatcg cagagcagtc tggagagctg gagagccgtg cagatcacct
     2281 ctatgactct atcttagcgt ctttggacaa gctggctggc tgcaccctca tccctgacaa
     2341 caagccaaga gcagcagcag aacacctgca cgaagggcct tgactcagca gaggtggcgt
     2401 catcagctaa ttggccgttg ggaagaaaac tcaagaactc cttgcaaggg ccatttaata
     2461 gttaaggaag gggagagatt caactttacc gtactttaag atgcctttct cacctctgaa
     2521 gggttgagtt attactgttt tcatttacta tgaatcctcc aaactaagac cttatctttt
     2581 ggtgcctctc taccaaaaat atgtggcttt ataactattt ggtaaaacac ttcgacttgt
     2641 gggtctcctg caccccaccc ctctgtttaa aaaccagcag acaaatgtgt tgaagccatc
     2701 tacagaaagc ggtcgcagac aaaatgtgtt gaagccatct acagaaagaa ggtcccaaat
     2761 acttggggat tctcaggcat acaggggggt gggatctaag agagggaaaa atgttagccc
     2821 ttagtccaca gaagtcagga gatcctctac agcgtccttt ggcagcggcc taccgggtgc
     2881 cacctgtagt ggttagtctc ccaccctgtg gagaagatgc ctcaggagtt ggcctgccat
     2941 catgcttctg aactacaagc tttgcttacc tctggggcac tcaaaccgct actcctctct
     3001 cctttagaag actagtcaaa ggaagggaat gggtagaaac agccacgtgg tctgatctgt
     3061 acataaatta aaacagccat tggtgatggg ggcgtgggga gggagacgac tctgtgattt
     3121 gggagtcaac aggtagtgcc ttgtcagtaa gaaaaaattt ttgtggacct atcacaatcc
     3181 ctatctatca agctgttcaa agcattaatt acagcttttg aagcaaagtg tttgtatgct
     3241 gggtaccaca aattccacaa agtatcagag gtgggctttt cagctttaaa aaagaaaata
     3301 gctgcttaga taagcatgta cgtgacttta gtcctagcgc ttgggtttga ggacagccta
     3361 gtttatgtta attagagtcc aggctggcca ggcctttata aagaaaagat tagctattca
     3421 ttaagtttat ataaaacaca gtattttcac atgcctgctg ctacacagta tgacttaccg
     3481 tgtttacggg catgatccaa attaaagatt tttgttgtta ctggtttgtt tttggttttt
     3541 tgagacaagg tttctctgta acagaaccct ggctgactgg gactccctct gtagaccagg
     3601 ctggcctcaa actcacagag ctccatctgc ctctgcctcc caaacgttgg gattaaagtc
     3661 atgcaccacc accgcccaac tcaaattagt tttattctgc catctctaag ttaagcttat
     3721 ttcttatact gtacatgctg catgacatgg tgcatggtgc tttcaaaagg ttaaaacaaa
     3781 acttttctag aaaataatta agttaaatgt aaaacatcct atgaaaccta aattggccag
     3841 aagcacatct tacccttttg atgtggcttt aaactgcctt tcaccaatgt tagaggagcc
     3901 ctcaggtatt aaacccattt gacaagcatg aaagtcaggg gactcagaaa agagcgagct
     3961 gtaccaactg aatgcaaaat ggggcaaccc tcttctttca ctgtgtaatt acaacccatt
     4021 cacctgacat ggtgcgcagc agagtgcttg cctggacatg gtctggtttg ctcagcctct
     4081 ttgtaacaga aaggcagcct ttactgtaac tttagggtct ggctggcctt ggctgggact
     4141 gctgtttagg aacatcaacc cagctgttag ttacatcttc tggtgtgtgt tatgattcaa
     4201 ctaaaattgt ctcagcctcg gatgtcgccg ccatttccac gtgcaaatgt ggccaggcta
     4261 gactcaaata gcctttttag aatttataaa tggtccctta aattcattga gttcacagta
     4321 aagtagcatc tcgagacagg gttcttacag gtctacaggt aagctctagc acaaagagga
     4381 ttcagacaca agctgttttg aaacttagat ggaacccaaa ggaaacagta ggacaaggtt
     4441 tggccaaata catgcccgag ggaacttcta tccaagtgag cacaggaagt tagggtgagc
     4501 cacggacaca gagaatgctc ctcatgcaac ttactccacg gcagtcattt ttaaaatata
     4561 ttgaggaata atcttctatt atgtgaacaa gttggagtct tgaaatgttt atacttgaaa
     4621 aatgggggct agagagatgg ctcaggttga gagtgctgac tgctcttcca gaggtcctga
     4681 gttcaaatcc cagcaaccac atggtggctc acaaccatct gtaatggggt ctgatgccct
     4741 cttctggtgt gtaagaaaaa tgggttattt ctcctctaaa acagcaattg tcagcacata
     4801 cataaaagca aacagtgaag gatgctgaaa tgatctggta gccctaagct tgctgccagt
     4861 ggggaaagag cactagaatt ttacaaagtc tgtaaatatg tttatattaa aaataaagtc
     4921 atataatatt ttctgctaac agaataagct gacagtttgg acaacttttg ctgtgtaaaa
     4981 ttaaagagct tggcatcatt tgtcttatac tggttttgta tcatttagtt attgacagaa
     5041 aatggcttat gaactctttc tccctttgta ttgacaagga aaaaaaccaa cagctacaaa
     5101 agaaaaagta aaagagatac ccaattactg gtgacctgag gaatttccag ttaaccttct
     5161 ttatatataa ggatgaatag acccaacaag cgcatctata atacaaagta aactatgatt
     5221 ttattgtgaa attctcatag atggaaaatt aaattgaata tttattctgt ccatttttca
     5281 ttttacaata atcttaccac ttatttttgt accatgtatt tcaattgtct gtttagtgaa
     5341 aaataaacct gtaatttttg gcttattttt agattaatat tttatcatta aagaccccat
     5401 aataaaatgt gttgtcaaca gccacaccct aagcccccaa ttgaagaatg cttggctgcc
     5461 gcttaaacca aaggaaacaa cctttgactt ttgtcacctt aaaatgctag tgtctacaag
     5521 agactctgtt tcccacagta agacaaaagc agtctaggat ctcgaaggtc ctagttaaca
     5581 aaactttcac acatgcaaaa tttcaccgaa ataaatatat tatttctccc atcattccca
     5641 tctagcgttc atgttttcag ttaatttggg gaatagaatg tctacagtta gggcaatcaa
     5701 catttcctgc tttctaatct aatgcttaac ctctcctcca acatgagtta tacagttgag
     5761 aagaataaag gtgacacctg gaagtggagg caggaggatc aggagttcaa ggccatcctt
     5821 ggttacaagt gaatttgagg cctcttgagc tatgtgagac actgtctcaa aaaaatgggt
     5881 gcagtctggg acatgccttt aatcccagca cttctgagga aaaggcaggt gggggagggg
     5941 tggtcagcct gttttacata cttaagttcc aggctagcca gggctacata gtgagacact
     6001 gtatcaaaaa aggaggaaaa aaa
//
