LOCUS       XM_039081200            5136 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 63 (Cep63),
            transcript variant X11, mRNA.
ACCESSION   XM_039081200
VERSION     XM_039081200.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5136
                     /gene="Cep63"
                     /note="centrosomal protein 63; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 1 long SRA read, 1 Protein, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     46 samples with support for all annotated introns"
                     /db_xref="GeneID:300963"
                     /db_xref="RGD:1561183"
     CDS             236..1885
                     /gene="Cep63"
                     /codon_start=1
                     /product="centrosomal protein of 63 kDa isoform X7"
                     /protein_id="XP_038937128.1"
                     /db_xref="GeneID:300963"
                     /db_xref="RGD:1561183"
                     /translation="MNWWPSNLQRWKNRSSTTQSCCQNKGDLAMEALLEGIQTRGHSG
                     GFLTSCEAELQELMKQIDIMVAHKKSEWEGQTHALETCLDMRDRELKALRSQLDMKHK
                     EVGILHQQIEEQEKTKQEMALEYKEELMKLQEELSRLKRSYEKLQKKQLREFRGNTKS
                     LREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLA
                     NRKQKLESVELSSQSEIQHLSSKLERAKDTICANELEIERLNIRVKDLMGTNVTILQE
                     QRQKEEKLRESEKLLEALQEEQKELKASLQAQESFILDAKMQEKLQTKLKAVDTKHSV
                     ERSLEDCQVERKYSSSGQGVLDNVLSQLDISHSSEELLQAEVTRLEGSLESVSTTCKQ
                     LSQELMEKYEELKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEGMKTEISQLTREL
                     HQRDITIASAKCSSSDMERQLKAEMQKAEEKAVEHKEILSQLESLRLENRRLSETVMK
                     LELGLHEVKCLKIEFFFSELPGSILPPKGYTITKGSLSAPK"
ORIGIN      
        1 tccgtaaccg accgcatgcc cctaagacgg gcgagctgcg gcttgttgtg cgtttgcggc
       61 cctggccacc gtggtgccgc taaccttctg gccgcatggc ccggggccgc agttcgttgc
      121 ggcccaccta ccgcgggggc ctccactgca cgcccactgc tgtccggccg ctgcgtccct
      181 gggttcctcc gtctcctccc tatggggctc tgagctgacc ggccagacta cagcaatgaa
      241 ttggtggcct agcaacctcc aaagatggaa aaaccgaagt tcgacgacac aaagctgttg
      301 ccaaaacaaa ggggatttgg cgatggaggc cttgttggaa ggaatacaaa ctcgggggca
      361 tagtggggga tttttgacat cctgtgaagc agaattgcaa gagctcatga aacagatcga
      421 tataatggtg gctcataaga aatctgagtg ggaggggcag acacatgctc tggagacttg
      481 tttggacatg cgcgatcggg agctgaaggc tctgaggagt cagctggaca tgaagcacaa
      541 agaggttgga atattgcatc agcagataga agaacaagaa aaaaccaagc aagaaatggc
      601 cctggagtac aaggaggagt taatgaagct gcaggaggaa ttaagcagac tgaagagaag
      661 ctatgaaaaa ctgcagaaaa agcaactaag agaatttaga ggaaatacca aaagtctgcg
      721 agaggatcgg tctgagattg agaggctgac tggaaaaata gaggaattcc gacagaagtc
      781 tttggactgg gagaagcagc gtctgattta tcagcaacag gtatcttctc tggaagcaca
      841 gaggaaggct ctagctgagc agtcagagat aatccaggct cagcttgcca accggaaaca
      901 gaaattagag tctgtggaac tgtctagcca gtcagaaatt cagcacctga gcagtaagct
      961 tgagcgggct aaggacacca tctgtgccaa tgagctggaa atagagcgcc ttaatataag
     1021 ggtcaaggac ctgatgggaa ccaacgtgac tatcctgcag gagcagcggc aaaaggagga
     1081 gaaactgagg gagtctgaaa agttactaga ggctctgcag gaagaacaga aagagttgaa
     1141 ggcaagtctt caagctcaag aaagcttcat tcttgatgca aaaatgcagg agaaactgca
     1201 aacgaaacta aaggcagttg acactaagca ctcagtagaa aggtctctgg aggactgtca
     1261 ggtggagagg aagtacagct cttcagggca gggagtcttg gataatgtgc tctcccagtt
     1321 ggacataagc cacagcagtg aagaactcct acaggcagag gtgactcgtc ttgaaggcag
     1381 tttggaatct gtgagtacaa catgtaaaca gctgagccaa gaactgatgg agaagtacga
     1441 agagctgaag aggatggaag ggcataacaa tgagtaccgg acagagataa agaagctgaa
     1501 ggaacagatt ctgcaggctg atcagactta cagctctgcc ctggaaggaa tgaagacgga
     1561 aatctcccag ctaacccggg agttgcacca gcgagatatc actattgctt ctgccaagtg
     1621 ttcctcctca gacatggaaa ggcagctgaa ggcagagatg cagaaggcgg aagaaaaggc
     1681 cgtagagcat aaggagattc tgagtcagct ggaatctctc agattagaaa atcgccgtct
     1741 ctctgaaaca gtgatgaagc tggaactggg cttgcacgag gtcaaatgtc tgaagattga
     1801 attctttttt tctgaacttc cagggagtat tctgcctcca aaaggataca caatcacaaa
     1861 aggctcccta tctgctccca agtaattcca attttacagt catggaggcc tagagcgaag
     1921 aaagtacaaa aggctaggag aacactttat ttcaactagg aaaatggggg ctattttcat
     1981 aatctttcag atgggcaaga ttctctaagc atcatgaagc cataaaggat tgtataacat
     2041 aaaatgtaaa atttctggat ggtgagggct ctgttaaaaa actgacagta gaagccaagt
     2101 gtggcggccc atgcttataa ttgcagcctc ttgagaggcg gaggcaggag gaccaagagt
     2161 tcaaggtcac actggaccag accctgcctc agaataaaca taacaacaga ggggctggga
     2221 gtgaagctta gagggagagc ctggattgac agctctagcc ctgggaaaga aacagcagtt
     2281 gaggatcagt aggccatatg tagactggct accaaagtga caagtgagaa tgtcctacag
     2341 ggcgatagga aagaggcccg gtaggaaaag gacaaagaac taagtagata tttcatagaa
     2401 atgtaaattc aagtgagcga gtaaccaaca tttttaaaaa taaaattttc ttgctaatag
     2461 gcttgatagt gatttagaaa gttaatattt ggcctctcgg caagtatttt aagagcaggc
     2521 tctcccatgc acatagaggt ggtcttcagt ccagttgagc catggacgtg aagcttgtaa
     2581 atacatgcag ccccaggtcc acctcagtgt ttccacctgt ggtattaata gccacgttct
     2641 tcagtgtcct cagcagtttg tatccccaga gaacccctta caggagtaaa agttcagaaa
     2701 tgggcacagc aggtgttgtg aaataaactg ttcacttaaa tggttgattt gtgattgtac
     2761 tctgaaatat gctgtcattt aagatagaaa tattcattta tgtttctacc actccacatc
     2821 ccttgattct ataatgaaaa caaattcttt aaagcaaaaa cccacatgga tgggaaaaaa
     2881 tagaggaaac agtaaccaaa catttaacat atttaatata attttatttt tgtgtgtacg
     2941 gtgtgtgatt gtgtctgctt gtgcatgtgt gtgtatgtgt gtgttgtgtg tgtacatgca
     3001 cgtatatgtg tgagtgtatg gaagctaggg gttgatattg ggtgtcttcc tctatcattc
     3061 tctaccattt gtattgagga agaggctctc acttggactc tgagcttgcc aattgggctg
     3121 gtctgactag ccagcttgct ccagagatcc tgtctccttt taccaagtac taggattacc
     3181 agcagtctac catgtccgct cggccagcat ttacatgagt attatagatc tgagctctgg
     3241 tcctcttgca tggcaagtac tttaccaact gaaccatttt ctcaatccca tagctaaata
     3301 ttttataaag tcttatctag gagatggaag atggatggag gcaggggtgg ggcaggtggc
     3361 taaccagctg gctggcttaa tgactagatg gatggataat aaatggatga attagtaagc
     3421 gagtgggtaa gtggataagc cagtaggtga gtgagtgaga gtgtagccaa caaatgactt
     3481 tgtatgccct gataaagcca gtactgagtg cgtagtaatt tgtggactaa tatggtttac
     3541 attatagtgt tctttaaaaa atgtgtcatt tgtcagtatt agagtggctc ccggttcaca
     3601 ttaaagaact gaaagatccc aggaatgtta aaggcagact gcacagggtt ctgtggtgct
     3661 gaacctgtcc tgaaccctta atgggagact gaccctcttt ccctactgag taactgagta
     3721 catgccttac gccccagttg tcctgccacc tttcccagtc atgtgcctgg actaattgtt
     3781 agtgaggtaa tagcccttag agatttcaga aagatgcaca gagaagttta tcttcttttt
     3841 aggtatgggc agtggttctc aaccttccta cagctctgac ccttcaatac agtttctcat
     3901 gttgtagtga ccccaacagt acaattattt ttgttgctat tcataaccat aattttgtta
     3961 tgatatgaat tttaatgtaa atatttttgg agaagacgtt tgctaaaggg gttatgacct
     4021 atatgttaag aaatgctggt ttaatgattt cagatatcaa aatggtgaaa atcatgtcac
     4081 ctttagtttc tctgctttca gagttcttca tacgttacaa atatctgtac agattatcaa
     4141 aacagaatta ctaggaaatg cctttttgca tgttaccacc taggaaggtg aatttaattt
     4201 tccaaattac tctaactatc ttaacgaagg cagcagctgt ggtgactaat attggccact
     4261 ttaaagttga gtagtggttc ataatgcagc cctgcactct acagatacag cgctgggtgg
     4321 gcagttggca gtgcagccgt gtcctgggaa tacacttctc tgaggtctcg taaagcatgg
     4381 acagctacta agaggtcttg tcattcctag tctacagcta tattacacac tagtgagttg
     4441 acaggtaaat tacatttacc agagctctat tgactagctt actttcacaa gttttctttg
     4501 cagaaaatga aatatgttaa actgtaaaga tcattcatta taattttgta gaatgttaat
     4561 taatgaaaaa aaattagaaa gtagatgtat attttcaaga aatatgatgt atgatcatag
     4621 aactaagacc agttcgtggt agaattcctg ccatataatc gagtcttggc ttttatgttg
     4681 ctaacttcat gtaaaagtac atgccaagaa gtgttttaaa tgaaagggtg tttactttaa
     4741 agctacccct ttggccacaa ttctctttag accctcgtgt ttaaattact ttctttgaat
     4801 tagttcctta atttcctccc acaggtgtgt gtgagggtgg gaagaagact cctcattctt
     4861 cttgatttcc tgtcttctga ctcttgaagc tttcctctgc cctgtttcca tcccttggat
     4921 gctcgtgtac agagggaagc caccttgcct ttaaccttgt tccttccttc actctaggca
     4981 gactggtgct tttcctgtgc tcatcttaag agggctaaag acaaatcttt actttctcta
     5041 agtaaagcca tagttaaaac taaaacagaa aatattttag ccagcactgt tgtagattga
     5101 tcataattac ccttaaacat actagtgatt ctagtg
//
