LOCUS       NM_001101008            1483 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus centrosomal protein 43 (Cep43), mRNA.
ACCESSION   NM_001101008 XM_001064064 XM_001064124
VERSION     NM_001101008.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Lee,J.Y. and Stearns,T.
  TITLE     FOP is a centriolar satellite protein involved in ciliogenesis
  JOURNAL   PLoS One 8 (3), e58589 (2013)
   PUBMED   23554904
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   3  (bases 1 to 1483)
  AUTHORS   Mano,Y., Takahashi,K., Ishikawa,N., Takano,A., Yasui,W., Inai,K.,
            Nishimura,H., Tsuchiya,E., Nakamura,Y. and Daigo,Y.
  TITLE     Fibroblast growth factor receptor 1 oncogene partner as a novel
            prognostic biomarker and therapeutic target for lung cancer
  JOURNAL   Cancer Sci 98 (12), 1902-1913 (2007)
   PUBMED   17888034
REFERENCE   4  (bases 1 to 1483)
  AUTHORS   Mikolajka,A., Yan,X., Popowicz,G.M., Smialowski,P., Nigg,E.A. and
            Holak,T.A.
  TITLE     Structure of the N-terminal domain of the FOP (FGFR1OP) protein and
            implications for its dimerization and centrosomal localization
  JOURNAL   J Mol Biol 359 (4), 863-875 (2006)
   PUBMED   16690081
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098026.1.
            
            On or before Aug 13, 2007 this sequence version replaced
            XM_001064124.1, XM_001064064.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098026.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..1483
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /note="centrosomal protein 43"
                     /db_xref="GeneID:683722"
                     /db_xref="RGD:1583370"
     exon            1..186
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..1284
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /note="Fgfr1 oncogene partner"
                     /codon_start=1
                     /product="centrosomal protein 43"
                     /protein_id="NP_001094478.1"
                     /db_xref="GeneID:683722"
                     /db_xref="RGD:1583370"
                     /translation="MAATTAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLA
                     LEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFHPETSTIQ
                     GLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTSVEGALDLSDGHPPSKS
                     PEGKTSVNSTPSKIPRYKGQGKKKTSGQKSGDKKTSSETSQSEPSVSLSESKSKSSLH
                     SLVHETRIASFLSNSTVDAKDKSALCPDEDDVEGDSFFDDPIPKPEKTYGWRSEPRKQ
                     VGGLASLSDKPHLRSGLSSLAGAPSLTDAESKRGSTVLKDLKLVGEKIGSLGLGSGED
                     EDYVDDFNSASHRSEKSELSIGEEIEEDLSMGVEDVNTSDKLDDLTQDLTVSQLSDVA
                     DYLEDVA"
     exon            187..240
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            241..295
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            296..384
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            385..522
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            523..603
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            604..663
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            664..890
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            891..1003
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1072
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1112
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            1113..1209
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1456
                     /gene="Cep43"
                     /gene_synonym="Fgfr1op"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgactgcgcg ctcgcgcgcc gggcggcttc cgcagcggct gttggccgtt agcgcagctt
       61 gggtggttgt cttggagaag caagatggcg gctactaccg ccgcggtggt ggctgaggag
      121 gacacggagc tgcgcgacct gctggtgcag acgctggaga acagcggcgt gctgaatcgt
      181 atcaaggctg aactcagagc ggctgtgttt ttagcactag aagaacaaga aaaagtagag
      241 aacaaaactc cgttggttaa tgagagcttg aaaaagtttt taaatacaaa agatggtcgt
      301 ttagtggcta gtctcgtagc agaatttctt cagtttttta atcttgactt caccttggct
      361 gttttccatc ctgaaacgag cacaattcaa ggtcttgaag gtcgagagaa cttagcccgg
      421 gatttaggca tcattgaagc agaaggtact gtgggtggac ccttattatt agaagtgatt
      481 agacgctgtc aacagaagga aaaaggacct accagtgtgg aaggtgcact ggatctatct
      541 gatggacatc ctccatcaaa gtcaccagaa ggaaaaacaa gtgtaaactc caccccaagt
      601 aagataccaa ggtataaagg acaaggtaag aagaagacaa gcggtcagaa gtctggtgac
      661 aagaagacca gcagcgagac cagtcagagt gagccaagtg tctccttgtc agagtccaag
      721 agtaaaagca gcctgcactc actggtccat gaaacaagaa ttgcatcttt cttaagcaac
      781 agcactgtag atgccaaaga caaaagtgct ctttgtccag atgaagacga tgtggaagga
      841 gattctttct ttgatgatcc cattcctaaa ccagaaaaaa cctatggttg gagaagtgaa
      901 cctaggaagc aagtgggagg tctggcttca ctgtctgaca agccccactt aaggagtggt
      961 ctcagctccc tggcaggagc cccttcacta acagatgctg agagtaaacg aggaagcacg
     1021 gtcttgaagg atctgaaatt ggttggtgaa aaaattggat cacttgggct aggatctgga
     1081 gaagatgagg actatgttga tgattttaat agtgctagcc atcgctcaga aaaaagtgag
     1141 ctaagtattg gtgaagaaat tgaagaagac ctttccatgg gagtagagga cgtgaacacc
     1201 agtgacaaac tcgatgacct cacacaagac ctgactgttt cccagctcag tgatgttgct
     1261 gactatctgg aagatgttgc atagacagga aaaggaagta ttctgatcaa cagaggacga
     1321 acgactcatt ggctccattt tcctcagtca cttttgctgg aatgtccgct cctgctggtg
     1381 ccttgcattt caaaaagact gcagatattt ttcaaagtta acttttcagt ttggtaaaca
     1441 aatacttcct atatgaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
