LOCUS       NM_001108261            1455 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus centrosomal protein 20 (Cep20), mRNA.
ACCESSION   NM_001108261 XM_001053257 XM_340737
VERSION     NM_001108261.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Jakobsen L, Vanselow K, Skogs M, Toyoda Y, Lundberg E, Poser I,
            Falkenby LG, Bennetzen M, Westendorf J, Nigg EA, Uhlen M, Hyman AA
            and Andersen JS.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Sedjai F, Acquaviva C, Chevrier V, Chauvin JP, Coppin E, Aouane A,
            Coulier F, Tolun A, Pierres M, Birnbaum D and Rosnet O.
  TITLE     Control of ciliogenesis by FOR20, a novel centrosome and
            pericentriolar satellite protein
  JOURNAL   J Cell Sci 123 (Pt 14), 2391-2401 (2010)
   PUBMED   20551181
  REMARK    Erratum:[J Cell Sci. 2010 Jul 15;123(Pt 14):2521]
REFERENCE   3  (bases 1 to 1455)
  AUTHORS   Martin J, Han C, Gordon LA, Terry A, Prabhakar S, She X, Xie G,
            Hellsten U, Chan YM, Altherr M, Couronne O, Aerts A, Bajorek E,
            Black S, Blumer H, Branscomb E, Brown NC, Bruno WJ, Buckingham JM,
            Callen DF, Campbell CS, Campbell ML, Campbell EW, Caoile C,
            Challacombe JF, Chasteen LA, Chertkov O, Chi HC, Christensen M,
            Clark LM, Cohn JD, Denys M, Detter JC, Dickson M,
            Dimitrijevic-Bussod M, Escobar J, Fawcett JJ, Flowers D, Fotopulos
            D, Glavina T, Gomez M, Gonzales E, Goodstein D, Goodwin LA, Grady
            DL, Grigoriev I, Groza M, Hammon N, Hawkins T, Haydu L, Hildebrand
            CE, Huang W, Israni S, Jett J, Jewett PB, Kadner K, Kimball H,
            Kobayashi A, Krawczyk MC, Leyba T, Longmire JL, Lopez F, Lou Y,
            Lowry S, Ludeman T, Manohar CF, Mark GA, McMurray KL, Meincke LJ,
            Morgan J, Moyzis RK, Mundt MO, Munk AC, Nandkeshwar RD, Pitluck S,
            Pollard M, Predki P, Parson-Quintana B, Ramirez L, Rash S, Retterer
            J, Ricke DO, Robinson DL, Rodriguez A, Salamov A, Saunders EH,
            Scott D, Shough T, Stallings RL, Stalvey M, Sutherland RD, Tapia R,
            Tesmer JG, Thayer N, Thompson LS, Tice H, Torney DC, Tran-Gyamfi M,
            Tsai M, Ulanovsky LE, Ustaszewska A, Vo N, White PS, Williams AL,
            Wills PL, Wu JR, Wu K, Yang J, Dejong P, Bruce D, Doggett NA,
            Deaven L, Schmutz J, Grimwood J, Richardson P, Rokhsar DS, Eichler
            EE, Gilna P, Lucas SM, Myers RM, Rubin EM and Pennacchio LA.
  TITLE     The sequence and analysis of duplication-rich human chromosome 16
  JOURNAL   Nature 432 (7020), 988-994 (2004)
   PUBMED   15616553
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474126.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_340737.3, XM_001053257.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228774.1, BC158662.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q11"
     gene            1..1455
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /note="centrosomal protein 20"
                     /db_xref="GeneID:360461"
                     /db_xref="RGD:1305823"
     exon            1..77
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..574
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /note="lisH domain-containing protein FOPNL; FGFR1OP
                     N-terminal like"
                     /codon_start=1
                     /product="centrosomal protein 20"
                     /protein_id="NP_001101731.1"
                     /db_xref="GeneID:360461"
                     /db_xref="RGD:1305823"
                     /translation="MATVTELKAVLKDTLEKRGVLRHLKARIRAEVFNALDDDREPRP
                     LLSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIRELNAFEESKDN
                     SIPLLYGILAHFLRGPPDGAQNVLLTESTLHPANKHVSWKPSRRPDDDHLKKDTGPRT
                     MTEELHAAAQAVIR"
     exon            78..275
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /inference="alignment:Splign:2.1.0"
     exon            276..360
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /inference="alignment:Splign:2.1.0"
     exon            361..494
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /inference="alignment:Splign:2.1.0"
     exon            495..1455
                     /gene="Cep20"
                     /gene_synonym="Fopnl; RGD1305823"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcggcacg tacacactgg agaggcgtgg caccagcggc cgttgaaaaa tggcgactgt
       61 tactgagctg aaagctgttt taaaggacac cttggaaaaa aggggagtgt taagacattt
      121 aaaagcaagg atccgtgctg aagttttcaa tgctctggat gatgatcgtg aaccccgacc
      181 attgttgtct catgagaacc ttctaattaa tgaattaatt agggagtatt tggaattcaa
      241 caaatataaa tacacagcct ctgtcctcat agcagaatct ggtcaacctg tagttccatt
      301 ggacagacag tttctcatcc gtgaactaaa tgcctttgaa gaatcaaagg ataactcaat
      361 tcctctgtta tatggaattt tagcccattt cttgcgtggt cctccagacg gagcccagaa
      421 tgtgcttctg acagaatcaa cactgcaccc tgcaaacaag catgtcagct ggaagcccag
      481 cagaagacca gatgatgacc acctgaagaa ggacacaggg ccaagaacca tgactgaaga
      541 gcttcatgct gctgcacagg cagtcattag atgatgtgta caccaggctc ttcacctcgg
      601 ctgtgtgtgg agtaactaac ttattcccag tgccatcaat tagaccacca ctgtctgtaa
      661 atgtttgaat gtctacaaac attcagccac tcgtggttta ctgcatctgt agaatactga
      721 tctgtcatct agtttgctgg atgccactgg gggaaattta ttgttttcag gatgtatttt
      781 taaagttctc atttgtgaaa tctgaaaggt ctttttagta ctttgcatag tttgtttttt
      841 ttaaggccag ctctaagtgc tgttgacgtg ccactggtaa agcactcacc tcccatgtgc
      901 aagggcctgg gttcagtcct agcaccggaa aaagaaaaca caagaacagc tctttgtcca
      961 tatgctctaa tcattaaact ttttctagct agaattatat ggacctatag ggaaagtcat
     1021 tcatgttttg aaaaaatatt taaaggggca ttaaaaccag aacttaattc ctataaagtt
     1081 tgattttttt ttttaaatct gaattactgt ctgccctggc tagttttatg tcaacttgat
     1141 acaagctaga ttcatttggg aagagggact ctaaattgag aaaatcgctc catcagattg
     1201 gcttatgggc aaacctatag tatatttttt tttaaattaa tgatcaatgt ggaagggtcc
     1261 agcccactgt gggtggtgtc acccttgggg aggcaatcct gggttcagta agaaagactg
     1321 agcaagccgt ggggagcaaa tcaatacata gcactcctct gtgaccccag cattagcttc
     1381 tgccctgttt tctctcagtg atgaactgtg atgttgaact gtaagctgaa ataaaccctc
     1441 tccttcccaa gttgc
//
