LOCUS       XM_039113410            6589 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 170B (Cep170b),
            transcript variant X1, mRNA.
ACCESSION   XM_039113410
VERSION     XM_039113410.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_001427267.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6589
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6589
                     /gene="Cep170b"
                     /note="centrosomal protein 170B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     ESTs, 5 long SRA reads, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 155 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:500726"
                     /db_xref="RGD:1595689"
     CDS             185..4912
                     /gene="Cep170b"
                     /codon_start=1
                     /product="centrosomal protein of 170 kDa protein B isoform
                     X1"
                     /protein_id="XP_038969338.1"
                     /db_xref="GeneID:500726"
                     /db_xref="RGD:1595689"
                     /translation="MSVTSWFLVSSSGTRHRLPRELIFVGRDDCELMLQSRSVDKQHA
                     VINYDQDRDEHWVKDLGSLNGTFVNDVRIPDQKYITLKLNDVIRFGYDSNMYVLERVQ
                     HRVPEEALKHEKYTSQLQVSVKVSAPKRSDTLPDHTPYCESSQPRPEKGDRRHGAEAV
                     AYRTPLYGQPSWWGEDDSGAPSEDRHQQEPYPERPKDLTQQDSELDSCRAPAEPPDYS
                     FRREPSYFEIPTKEAPQPPRLPEVPTQEMPTKDQEACTGGTAPVVQSHASFTIEFDDC
                     SPGKVKIKDHITKFSLRQRRPPSKETTPVEMVSAETKVADWLVQNDPSLLRRDGPGDD
                     RHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKTASVSGAPTEASGEQVRLQRQIRR
                     DPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHTPPADPKADKRRVTGAADRERPGVTV
                     RTTGSSSGPQRASSLKREKTEERLGNTSPVPRASTRPFGSVGRRSRLAQDFMAQCMRD
                     SSPATRPGPEKTPPVLPAPLTPRGASPVTPSSTPPPPTDPQLTKARRQEEDDSLSDAG
                     TYTIETEAQDQEVEEARKMIDQVFGVFESPELSRVSSATFRPVIKGDKDECSDGGMAQ
                     RMALLQEFASRTPGMAAQMEQQSLLVPGSPGGQKWVSRWASLADSYTDAGLAEDGPGR
                     RTGEPEGPLPVRTRRLLPQLPSDRADSPAGLEAARRNGPGPPELSGDPANCLIGQEDL
                     DPDSLSDASGSDGGRGPEPGTERQEDLAWVRGRRSPRAPGELAPTSFFIGDQNGEATF
                     PKKSFVAPGEADGPGRVVQTSPSARDSLYISSNGRMVIQLRSGRSPEPDPAPPKETLT
                     FARQESFTKEPTSGPPAPGKLPHISSHPLLQDLAAARASRMDFHTQDTHLILKETETA
                     LAALEARLRSKSADECEGGSTPRPPEDSLSGDSDVDTASTISLLSGKNGPSPTTPQTP
                     GPQKESLLSPPAVPDPGVMTPGSARERLSERQHRPPPADLGHGDPSRRLAMRRGHGSR
                     GSLDWPEEERGSGLAHLPNSNHETPEATVSGRQGPRRKPVAPPPSPAAREEQSRSSTT
                     AQKVQQVLTRSNSLSTPRPTRASRLRRARLGDASDTEAVDGERGTTANPEPVNRAAPE
                     QAKKLTRLDILAMPRKRAGSFTGPSDSETTPARTGFSGRSAELYSTSRKPTIAEARAA
                     AKKAAATAANPGPRQPFSRARPGSARYSSSTRRRQQGSDYTSTSEEEYGSHHSSPKHT
                     RSHASTATQTPRGSSSVRARSQGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVK
                     DVAILAREIHDVAGDGDSLGSPGPTRSPSLGNVPNTPASTISAREELVQRIPEASLNF
                     QKVPPGSMNSHNNLDQNMNDSPEDALANKTRPRNREEVIFDNLMLNPVSQLSHAIREN
                     TEHLAEKMKILFQNTGRAWEDLEARINAENEVPILKTSNKEISSILKELRRVQKQLEV
                     INAIVDPSMNLDLLMGNRAPAGSVQPGLGKARPAAQSSASPASVDTLLPAMPLRSFPQ
                     RANCGPPGLPEPAFLPDAERFLI"
ORIGIN      
        1 ctgcccgtgg gctcggccgg ggctgccgcc agcgtgcggg ccgcgccggg catgtcctag
       61 gcggcggccc cgcccagcgc tcggccgggc gggcggaggg ccgggctggg ccgggcagcg
      121 tcctggcggg cgagccgcgg gcctggcggg agcacagggc caggccggcc tcctcggtgc
      181 caagatgagc gtcacatctt ggttcctggt gagcagcagt ggcacccgcc accggctccc
      241 gcgtgagctc atcttcgtgg ggcgtgatga ttgtgagctc atgttgcagt cccgtagtgt
      301 ggacaaacag catgctgtca tcaactacga ccaggaccgt gatgaacact gggtgaagga
      361 cctgggcagt ctcaatggga catttgtgaa tgacgtgcgc atcccagacc agaagtacat
      421 cacactgaag ctcaacgatg tcatccgctt tggctatgat tccaacatgt acgtgctaga
      481 gcgtgtgcag caccgtgttc ctgaggaggc gctcaagcac gagaagtaca ccagccagct
      541 gcaggtgagc gtcaaggtct ctgcacccaa aaggagtgac acgctgccag accacacacc
      601 ctactgcgag tcctcacagc ccaggccgga gaaaggggac cgcagacatg gagcagaggc
      661 ggtagcttac cgcacacccc tctatgggca accctcctgg tggggtgagg atgacagtgg
      721 ggcaccatct gaagaccggc accagcagga gccctaccca gagcgtccca aggacctgac
      781 acagcaagac agtgagctag acagctgccg tgctcctgcc gaaccaccag actactcgtt
      841 cagacgtgag cccagctact tcgagatccc cacaaaggaa gccccgcagc ctccacggct
      901 ccctgaagtg ccaacgcagg aaatgcccac aaaagaccag gaggcctgca ctggtgggac
      961 ggccccagtg gtgcagagcc atgcctcctt caccattgag tttgacgact gcagcccagg
     1021 caaggtgaag atcaaagacc acatcaccaa gttctccctg cgtcagcggc ggccccccag
     1081 caaggagacc acacccgtgg agatggtctc ggctgaaacc aaggtggctg actggctggt
     1141 gcagaatgac ccaagcctgc tgcgccggga tggcccaggg gatgaccgcc acagcaccaa
     1201 aagcgacctt cctgtccaca ctcgaactct gaagggccac aagcatgagg atgggacaca
     1261 gagcgactcg gaggacccct tggccaagac tgcttcggtg tctggagccc cgacagaggc
     1321 cagtggggag caggtgcggc tgcagaggca gatcaggagg gaccctcagg agcttctgca
     1381 caaccagcaa gccttcgtca ttgagttctt cgatgaggac acaccccgta agaaacgctc
     1441 acagtccttt acacatactc cacctgcaga ccccaaggct gacaagcgca gggtcacggg
     1501 ggctgcggac agagagcgtc ccggtgtcac ggtgcgcacc acaggcagca gctcaggacc
     1561 acagagggcc agctcgctca agcgagagaa gactgaggag cgactgggca acacctctcc
     1621 tgtcccccgt gcctccaccc gcccctttgg cagtgtgggg cgccgctccc gcctggccca
     1681 ggacttcatg gcccaatgta tgcgggacag ttccccagcc accaggcctg ggcctgagaa
     1741 gacgcctcca gtgctgcccg cccctttgac gccccgaggg gccagccccg tgaccccctc
     1801 aagcaccccg ccgcctccca ctgaccccca gctgaccaag gcacgtagac aggaggagga
     1861 tgacagtctt agtgacgcgg gcacctacac catcgagaca gaggctcaag accaagaagt
     1921 ggaggaggct cggaagatga tcgaccaggt ctttggggtg ttcgaatccc ctgaactctc
     1981 cagggtgtcc tcagctacct tccgccctgt catcaaaggt gacaaagatg aatgcagtga
     2041 tggcggcatg gcccagcgga tggctttgct gcaagagttt gcttcccgca ccccaggcat
     2101 ggccgcacag atggagcaac agagcctcct ggtcccaggt tcccctgggg gtcagaagtg
     2161 ggtttcgcgt tgggctagcc tggctgacag ctatactgat gctggcttgg cagaggacgg
     2221 tcctggccgc agaactggag agcccgaggg gcccctgcct gtgcgaaccc ggcgtctgct
     2281 ccctcagctg cccagcgata gggctgacag ccccgcaggc cttgaagcgg ccaggcggaa
     2341 tggcccaggg ccaccagagc tgagtggtga tccagcaaac tgccttatag gccaggaaga
     2401 cctggacccc gatagtctca gtgatgccag cgggtcagat ggtggccgag gcccggaacc
     2461 aggcacagag cggcaggagg atctagcatg ggtcaggggt cggcgctcac caagggcccc
     2521 tggggagcta gcccccacct ctttcttcat tggtgatcag aatggggagg ccaccttccc
     2581 caagaaatca tttgtggctc ctggggaagc ggatggcccg ggacgggttg tccagaccag
     2641 cccttcagca agggacagcc tttacatcag ttccaacggg agaatggtga tccagttgcg
     2701 cagtggtcgg tccccagagc ctgacccggc cccacccaag gagactctga cctttgcccg
     2761 gcaagagagt ttcactaagg agccgaccag cggcccccca gcccctggca agctccccca
     2821 catttctagc cacccgctcc tacaagactt ggctgcagcc cgcgcctcac gcatggactt
     2881 ccacactcag gacacccacc tgatcttgaa ggagaccgag acagccctgg cagccctgga
     2941 ggcccgactc cgctccaagt ctgcagatga gtgtgagggg ggcagcaccc ctaggccccc
     3001 agaggactcc ctgtctgggg attcggatgt ggacacagct agcactatta gcttgctcag
     3061 tggcaaaaat ggacctagcc caacaacccc ccagactcca gggccacaga aggagagcct
     3121 gctgtctcct ccagcagtac cagacccggg ggttatgacc ccaggcagcg cccgagagcg
     3181 actatctgag cgacagcatc gcccaccacc tgcagacttg ggccatggag acccatcaag
     3241 gcgcctggct atgcggcgag gccatgggtc tcgagggtcc ctggactggc cagaagaaga
     3301 gcgaggctct ggccttgccc acctgcccaa ttctaaccat gagacccccg aggctaccgt
     3361 gtcaggtcgc caagggcctc gccggaagcc ggtggctccc ccaccgtccc cagctgcccg
     3421 ggaggagcaa agccgcagtt ccaccacggc tcagaaggtg cagcaggtac tgacccgctc
     3481 caacagcctg tccaccccaa ggcccaccag ggcctcccga ctcaggcggg cccgtctggg
     3541 ggatgcctca gacactgagg ccgtggatgg tgaacgaggg accacggcca accctgaacc
     3601 agtaaatcgt gccgcccctg agcaggccaa gaaactgaca cgcttggaca tcctggccat
     3661 gccccggaag cgggcgggct cctttacagg gcccagtgat tctgagacca cccctgcccg
     3721 tactggcttc tctggtcgca gtgctgagct ctacagcacc agccgtaagc ccacgatagc
     3781 tgaggcccgc gctgctgcca agaaagctgc tgctactgct gccaacccag gcccccgcca
     3841 gcccttcagc cgggctcgcc cgggcagtgc cagatattct tccagcactc ggcggcggca
     3901 gcagggttcg gattacacgt ccacctccga ggaggagtat gggtcccacc acagctcccc
     3961 taaacacaca cgctcccatg cctcaacagc cacacagacc ccaaggggca gcagctctgt
     4021 ccgggctcgc tcccagggcc cccgagacac agacgatgat gaggaagagc ctgaccccta
     4081 cggcttcatc gtgcagacag cagagatcgc ggaaattgct aggctaagcc agacactagt
     4141 aaaggatgtg gccatcctgg ccagggagat ccatgatgtg gctggagatg gggactcgct
     4201 gggctcccca ggacccactc gcagcccatc tctcgggaat gtgcccaaca cccctgcctc
     4261 aaccatctca gcccgggaag agctggtaca gcgcattcca gaggccagcc tcaacttcca
     4321 aaaagtgcca cctggctcca tgaactccca caacaacttg gaccagaaca tgaatgacag
     4381 ccccgaggat gccctggcca acaagacaag gcctcggaac cgcgaggagg tgatctttga
     4441 taatctgatg ctaaacccag tgtcccaact gtcacacgcc atccgtgaga acacggagca
     4501 tcttgccgag aagatgaaga tcctcttcca gaacacaggc cgggcatggg aggacttaga
     4561 ggccagaatc aacgctgaga atgaagtacc catcctgaag acatccaaca aggagatcag
     4621 ctccatccta aaagaacttc gacgtgtaca gaagcagtta gaagtcatca atgctattgt
     4681 ggaccccagc atgaacctcg acctactgat gggaaacagg gctcctgcag ggtccgttca
     4741 gccaggactt gggaaagccc ggccagcagc tcagagctca gcttctcctg cctcggtgga
     4801 caccttgctg ccagccatgc ctctcaggag cttcccacaa cgggcaaact gcgggccccc
     4861 cggcctcccg gagcctgcct tccttcctga tgctgagagg tttctgatct aagctgtgag
     4921 gcgggcaagg ccagccttct tgtgcgcgtg tgtcctgtgc atcacccatc ccatggccca
     4981 cctgcctggc tcaggcagtt ctgtgaaaac cccacatgtg ccataaccca tggacgggtg
     5041 cctcccattc ccaggcctct cctcagccag cacccgaacc acttcatcca gctcatggct
     5101 accccatccc cacagacctc ctagcccagc ccctggggtg tccactgccg agggccagcc
     5161 tgcgaggtcc catattcacc tcctgtcact cacgttgttt ttgttagtag ctttaaagga
     5221 aagagtaatt tgctcccctg caggaactcc taggcccagc ttaggtgcag ctccagctgg
     5281 gaggccctgt ctcatccctg tgtgctggct gaggccagac agagaatgga gctggaccct
     5341 gggacccatc agtgccaaac acagaagctg gatgagtttg gcatgtcccc aaactgtcca
     5401 ggaaagaggc cacttgcttt gtggctccta ctgagtccac ggccagagct gctgcagagt
     5461 ccatcaacct gggcagatga gtgtttcacg gagatatttg ggggaggaac cccacagctc
     5521 tacgcccttg gtgccaacac aactgccaaa cccactgagt ttgggtgcca tcccagcaag
     5581 ctctcctgag tggttcatcc caactaggga tcctgggctt ccttacggtg ggactgggta
     5641 tagctggtga accagcagtc ccgttggtta tggtgaatgc tttaccagag aggcaggaaa
     5701 agatttggaa ggtttgtgat gtaaaccatg cacctgctcc tgctgtccca gatggtgtgg
     5761 gcaggaagtg gtaactacag caggctcctg tggcctgctc catcctggag gcctggcagg
     5821 gacaggccca ctactggcta tgctttctca ggattagttc ggctggggcc tgccgggtga
     5881 gcagagagcg gctgccctgc cgctacccct tgctgatgtt tctggcggca ctaagccaaa
     5941 gagaccgttg gctggaatgg gatggggaga gtcccttatt gttcaggctg gcatgggtgt
     6001 gctctgtaac ctgcctgatg tttgtgtggg tgttgctcct gaacaggacc tatctgctgg
     6061 ggagaggtag ctgcggcggg ggacccagag ccctcagggg tagcatgggt ctccctgttt
     6121 acacttagct gatagtcatg cacgggtcct gtgtgcctct gcccagccca cctgatgttt
     6181 acgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtagcctg ctatctgtct
     6241 ggaggaggtg ccagcccagc ccgttggctg ctgccttgca tgtcccacac attgcccaca
     6301 gcctgctctc cataagtaaa cggctgtcct gcagagtcca tgcctcccac ccctggtcat
     6361 cactgtgtaa tttttttttt aaatgcacaa aatggtgtcc tctacacact tagttcctct
     6421 gtcactttag ccttcaccct ggcattggta ctgtgcctgc ctggctcctg aaggcctctg
     6481 tacattgttc tcaggcggtc ttgtggatgt cttttcgaaa acggttattt tatatgattt
     6541 gtcatgggat ttgttctaat aaatcattcc tccacgtggc agcacacca
//
