LOCUS       XM_056985588            4782 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 128 (Cep128),
            transcript variant X5, mRNA.
ACCESSION   XM_056985588
VERSION     XM_056985588.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985588.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4782
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4782
                     /gene="Cep128"
                     /note="centrosomal protein 128; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     139 samples with support for all annotated introns"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
     CDS             506..3820
                     /gene="Cep128"
                     /codon_start=1
                     /product="centrosomal protein of 128 kDa isoform X4"
                     /protein_id="XP_056841568.1"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
                     /translation="MAESSSDSDHFRYRDRLSRWAARSVQRGIGSRSTVDVTAKVNTI
                     TSTLQDTTRNLRQMDQMLGRYREYSLGQAGAVGQLKEDLEQSINQLRSQRLRRSSGGR
                     SVSVTSLSASDFDGGAVAESLRFTPTSPLKDYDPQGIKRNRFRTGVRFVSETDDMVQL
                     HTFHQSLRDLSSEQVRLGDDFNKELFRRSRSDAETKRVLEELTEKLNEAQKQDVVSDR
                     VERRLQEIEREMRFERELVERRHDQLGLVSLKLQEALKKQEAKGDENEDIIKNKLRQT
                     ETEKSQLEQELEISRRLLSQSEGSRETLLHQVEELRTQLIKAEGDQRGLQHQVSCISK
                     QPSSHQDDQGDDRRFRRGVEREKQNLEKQMADLRVQLNFNAMASELEEVKRCMDRKDL
                     EKANLAAKIENLTRDLENREKQQLQMLDQLTEIQNHFETCEATRKQTDLQISELSQHA
                     EEATKQAEHYLSEFQRSEALREEAEKRREDLKAKAQDAIRQWKLKHKKLERSMEKQGE
                     TLVQLTEKNNQVLKERDELKGQLCAALQQIENLRKELNDVLSKRALQDEELHCKEKKL
                     NDIESHRAELELEVKNSLDTIHRLENELKRQSMIQNQIKAEKFHLEEEITELKESQSQ
                     DKVKLLEMQESIKDLSAVRADLANRLAEEERAKKAAFRDLSELTAQVKSKEEETVTAV
                     TQLKLERDVHQRELEDLTSSLESVKVKHEQNIQELMRHFKNEKSEAESHIRTLEAESL
                     EDKKVAKAHLGQLEKLKSKCEKLAEELTQNENENKKLKLKYQSLKEELEAKEKHISNE
                     EEHLRRMEESRLQLKDQLLCLETEQESILGVIGKEIDEACKTFSRDSAEKLKVFTSGP
                     QIHYDPHRWLAESKTKLQWLCEELKERESREKTLRRQLAASRQELRELTQHKESELLC
                     LFEHIERQEQLLEEFHQEKRGLLEETQRKDEEVETLQDRVNALQMSTRVALDHLESVP
                     EKLSLLEDFKDFRGSSSLSVKSDGRYSKYSLHGDSAQQRRDDTKYRIKTFRDDRPFSA
                     GSHAHGLDHSSSWQDHSRFLSTPQFSHFNCLPAFTKRTIASDPASIKGDAPGLPANGT
                     SLQSKREEYESKKSKM"
ORIGIN      
        1 ccaaagagcc aagcggcggc ggcgcgtcct gtgctctagc cgcgcctggg cggctagttc
       61 aagttgccat agctgcgagt cccgggtgag cggagtcggt tgcgaggcag cgttgggtca
      121 gttgcacctt cggggtcgct ggtagccgcg ggagccgggt agggcctcgg cgatgatccg
      181 gcgttaagaa cttggagtca ccttgggtct aaggtgtttt tgggggaagc gtagagacaa
      241 ccagaaaggt catctactcg actcgacctc ttgccctgaa cctcatgaag aaatgatagg
      301 aggcaagcac cctgagctcc aaggacggca acgcagagtt ctgggagtac actttgggtt
      361 ccaccagatg ctggagtctg agcagctccc attgctcaga gtgactgaaa ttcctaacag
      421 aagtcttaga gcgcacctgt gagactcatg ccgaaaagta tctcactgaa agtatgtaat
      481 cctagctggg gatttgtata catcaatggc agaatcatcc agtgattccg accacttccg
      541 ctatcgtgac agattgagtc gatgggcagc caggtcagtt caaaggggaa ttggaagtcg
      601 ttctacagta gatgtcaccg caaaggtcaa caccataacc agtactttac aggacaccac
      661 tcggaatctg cgacaaatgg atcagatgct tgggcgatat cgagaataca gccttggaca
      721 ggcgggcgct gttgggcagt taaaggaaga tttggagcag tcaataaacc agctgaggag
      781 tcagcgctta cggagaagct caggagggag aagtgtttct gtcaccagcc tgagtgcaag
      841 tgacttcgat ggtggcgctg tggcagagag tctccgcttt acacctacct cacctctgaa
      901 ggactatgat ccacagggta ttaaacggaa caggttcaga actggcgttc ggtttgtttc
      961 ggaaacagac gacatggtcc agctccatac ctttcatcag tccctccgtg acctcagtag
     1021 tgaacaagtt cggcttggag atgatttcaa caaggagctt ttcagaagaa gccggtccga
     1081 tgctgaaaca aaaagggtgt tagaagaatt gaccgaaaag cttaacgagg cccagaaaca
     1141 agatgtggtt tcagatcgag tggagcggcg gcttcaggaa atagaaagag agatgcgctt
     1201 tgaaagagag ctggtggaga gacgccatga tcagctggga ctcgtgtcct tgaagcttca
     1261 ggaggcactg aagaaacaag aggctaaagg cgatgagaac gaggacataa taaagaacaa
     1321 gctgcgacag actgaaactg agaagagcca actggagcag gaattggaga tctcgcgcag
     1381 gctgctgagc caatctgaag ggagtagaga aacgcttttg catcaggtgg aagaactgcg
     1441 tacacaactt attaaagcag aaggtgacca aaggggtttg cagcatcaag tatcttgcat
     1501 ttccaagcaa ccgtcaagcc accaggatga tcaaggggat gaccggaggt ttagaagagg
     1561 agtagagcgg gagaaacaga atctggagaa gcagatggca gatctgcgag tgcagctcaa
     1621 cttcaacgcc atggcttctg agttggagga agtgaagcgg tgcatggacc ggaaagacct
     1681 ggagaaagca aacttggcag ccaaaataga gaatctaaca cgtgacttgg agaacaggga
     1741 aaaacaacag ctgcagatgt tggatcaact tacggagatc cagaatcact ttgagacctg
     1801 tgaggccact cgtaagcaga ccgacctcca gatctcagag ctgagtcagc acgcagagga
     1861 agcgaccaag caggctgagc actaccttag tgagttccag aggtcggaag ccctgcgaga
     1921 ggaggctgag aagaggagag aggacctgaa agcgaaggcc caggacgcca tccggcagtg
     1981 gaagctgaag cacaagaaat tggaacggtc aatggagaaa caaggtgaaa cccttgtcca
     2041 gctgacagag aagaacaacc aggttctgaa agagagggat gaattgaaag gccagctttg
     2101 tgcagcgtta cagcagatag agaatctcag gaaggaactt aatgatgtct taagcaagcg
     2161 tgccctgcag gacgaggagc ttcactgtaa ggagaagaaa ctgaatgaca ttgagtccca
     2221 ccgagctgaa cttgaactgg aggtcaagaa ttccctggac accatccaca gactagaaaa
     2281 tgagttgaaa agacagagta tgattcaaaa ccagatcaaa gcagaaaaat ttcacctgga
     2341 ggaagaaatt acagagctaa aggagagcca gtcccaagac aaagtcaaac ttcttgagat
     2401 gcaggagtcc atcaaggacc tgagtgccgt ccgagcagat ctcgctaata gattggctga
     2461 ggaagagaga gccaagaaag ctgcattcag ggacctttct gagctgacgg cccaggtaaa
     2521 atcgaaggaa gaagagactg tgactgctgt cacacagtta aagttagagc gagacgttca
     2581 ccagagggag ctggaggacc tcacctcatc gttggagagt gtgaaggtga agcacgagca
     2641 gaatatccag gagctgatga ggcactttaa gaacgagaag agtgaagcgg agagccatat
     2701 caggacgctg gaggcagaaa gcttggaaga taagaaagtg gctaaagccc atctcggtca
     2761 gctagagaag ttgaaatcca agtgcgagaa actggcggag gaattaaccc agaatgaaaa
     2821 tgagaacaag aaactgaagc taaaatacca gagtctgaag gaggaactag aagcaaagga
     2881 gaaacatata agtaatgaag aggagcactt aaggaggatg gaagaatcca ggctgcagct
     2941 caaggatcag cttctttgtc tggagacaga acaggaatcc attcttggtg taataggaaa
     3001 agaaattgat gaagcttgta aaactttctc cagagactca gcagagaaac tgaaagtgtt
     3061 tacctctggt cctcaaatac attatgaccc acatcgatgg ttagctgaaa gcaagaccaa
     3121 gttgcagtgg ctgtgtgagg aactgaagga gagagagagc agagagaaga ccttgcggcg
     3181 gcagctggcg gccagtagac aggagctcag ggagctgacg cagcacaagg agtctgagct
     3241 cctgtgtctg tttgagcaca ttgagaggca ggaacagctt ctggaggagt tccaccagga
     3301 gaagagaggt ctgctagaag agactcaaag gaaagatgaa gaagtggaaa ctctccagga
     3361 ccgagtaaat gcattacaga tgagtacccg agtggccctg gaccatctgg agtctgtgcc
     3421 tgagaaactg agcctgctag aggatttcaa agacttcaga ggttcctcca gtttatctgt
     3481 gaaaagtgat ggcagatact ctaaatacag tctccacgga gattctgctc aacagcgccg
     3541 agatgacacc aagtacagaa tcaagacctt tagggacgac agaccctttt ctgccggttc
     3601 ccacgctcat ggcctagatc actcctcctc ttggcaggac cacagtcgct tcctgtctac
     3661 tccacagttt tcacacttta actgcttgcc agcatttacc aaaagaacca ttgcctcaga
     3721 tccagcttca atcaagggag atgccccagg tttaccagcg aatggaacaa gtctacagtc
     3781 caagagggag gagtatgaga gcaaaaaatc caaaatgtga ttcacaacct cacttgagta
     3841 tttcccaagt aacagcccat agtccttgtt gccactgggc tcagattatc taaagacatc
     3901 atgtgggttc agctccttgg aatcaccaag cgttgactag catgacgtta tagccagtct
     3961 ttgtgaggga gaataaattt aacttgtaga ggtaatatca acttatgaac gatatataac
     4021 tcacttaaag gcaactggta ccagcagaga aagtgatcat ttctacctta tattttccta
     4081 tttctcagtg tcacaatttt ccaacccaac ctggaattta taatctatgc ctttccaaga
     4141 tgactggcta caaggagaag gggttccctc caggcaaatg ttcccagcag tttagagtca
     4201 ggcacatttg tacacggggg atgtgtaaat gctttctccc tcatcgtcat gtgttttaac
     4261 ctgttgtgga gatgctttgg aatatcagac tgccttttca atgcttgtcg tcatcacctg
     4321 tcaaatcagc agtctgttac tacatgaagt atcttcaaac cattgcaatt gtcattttaa
     4381 ttgcaaaaga atttataaaa gatagctgaa tcatagagca tcataaagaa ttcataacat
     4441 catttatata tttgtcatgt tacggccact tgtcccactg cgatcatcct ggtcatacgc
     4501 tggatggtct ttggtttgct gtgacctcaa tcccagcacc cctgtcctgg gtcagtcagt
     4561 gggatccact ctgtaggaat ccttatatcc tttggtacta ctgctttcca catcccagtc
     4621 tttcaacatc aatgtgcttt taaaacctta ccgctccgct gtgcccatca accagtgaat
     4681 attaaataat ggccatcatc ctgaaactga gtccaactgg gccatggtgg aaaaacctgc
     4741 acagggcagg aacaataaag caattccttt gtaagaacaa tg
//
