LOCUS       XM_056985587            4804 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 128 (Cep128),
            transcript variant X4, mRNA.
ACCESSION   XM_056985587
VERSION     XM_056985587.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985587.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4804
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4804
                     /gene="Cep128"
                     /note="centrosomal protein 128; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 23 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     161 samples with support for all annotated introns"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
     CDS             504..3842
                     /gene="Cep128"
                     /codon_start=1
                     /product="centrosomal protein of 128 kDa isoform X3"
                     /protein_id="XP_056841567.1"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
                     /translation="MAESSSDSDHFRYRDRLSRWAARSVQRGIGSRSTVDVTAKVNTI
                     TSTLQDTTRNLRQMDQMLGRYREYSLGQAGAVGQLKEDLEQSINQLRSQRLRRSSGGR
                     SVSVTSLSASDFDGGAVAESLRFTPTSPLKDYDPQGIKRNRFRTGVRFVSETDDMVQL
                     HTFHQSLRDLSSEQVRLGDDFNKELFRRSRSDAETKRVLEELTEKLNEAQKQDVVSDR
                     VERRLQEIEREMRFERELVERRHDQLGLVSLKLQEALKKQEAKGDENEDIIKNKLRQT
                     ETEKSQLEQELEISRRLLSQSEGSRETLLHQVEELRTQLIKAEGDQRGLQHQVSCISK
                     QPSSHQDDQGDDRRFRRGVEREKQNLEKQMADLRVQLNFNAMASELEEVKRCMDRKDL
                     EKANLAAKIENLTRDLENREKQQLQMLDQLTEIQNHFETCEATRKQTDLQISELSQHA
                     EEATKQAEHYLSEFQRSEALREEAEKRREDLKAKAQDAIRQWKLKHKKLERSMEKQGE
                     TLVQLTEKNNQVLKERDELKGQLCAALQQIENLRKELNDVLSKRALQDEELHCKEKKL
                     NDIESHRAELELEVKNSLDTIHRLENELKRQSMIQNQIKAEKFHLEEEITELKESQSQ
                     DKVKLLEMQESIKDLSAVRADLANRLAEEERAKKAAFRDLSELTAQVKSKEEETVTAV
                     TQLKLERDVHQRELEDLTSSLESVKVKHEQNIQELMRHFKNEKSEAESHIRTLEAESL
                     EDKKVAKAHLGQLEKLKSKCEKLAEELTQNENENKKLKLKYQSLKEELEAKEKHISNE
                     EEHLRRMEESRLQLKDQLLCLETEQESILGVIGKEIDEACKTFSRDSAEKLKVFTSGP
                     QIHYDPHRWLAESKTKLQWLCEELKERESREKTLRRQLAASRQELRELTQHKESELLC
                     LFEHIERQEQLLEEFHQEKRGLLEETQRKDEEVETLQDRVNALQMSTRVALDHLESVP
                     EKLSLLEDFKDFRGSSSLSVKSDGRYSKYSLHGDSAQQRRDDTKYRIKTFRNSMCPLS
                     QDDRPFSAGSHAHGLDHSSSWQDHSRFLSTPQFSHFNCLPAFTKRTIASDPASIKGDA
                     PGLPANGTSLQSKREEYESKKSKM"
ORIGIN      
        1 aaagagccaa gcggcggcgg cgcgtcctgt gctctagccg cgcctgggcg gctagttcaa
       61 gttgccatag ctgcgagtcc cgggtgagcg gagtcggttg cgaggcagcg ttgggtcagt
      121 tgcaccttcg gggtcgctgg tagccgcggg agccgggtag ggcctcggcg atgatccggc
      181 gttaagaact tggagtcacc ttgggtctaa ggtgtttttg ggggaagcgt agagacaacc
      241 agaaaggtca tctactcgac tcgacctctt gccctgaacc tcatgaagaa atgataggag
      301 gcaagcaccc tgagctccaa ggacggcaac gcagagttct gggagtacac tttgggttcc
      361 accagatgct ggagtctgag cagctcccat tgctcagagt gactgaaatt cctaacagaa
      421 gtcttagagc gcacctgtga gactcatgcc gaaaagtatc tcactgaaag tatgtaatcc
      481 tagctgggga tttgtataca tcaatggcag aatcatccag tgattccgac cacttccgct
      541 atcgtgacag attgagtcga tgggcagcca ggtcagttca aaggggaatt ggaagtcgtt
      601 ctacagtaga tgtcaccgca aaggtcaaca ccataaccag tactttacag gacaccactc
      661 ggaatctgcg acaaatggat cagatgcttg ggcgatatcg agaatacagc cttggacagg
      721 cgggcgctgt tgggcagtta aaggaagatt tggagcagtc aataaaccag ctgaggagtc
      781 agcgcttacg gagaagctca ggagggagaa gtgtttctgt caccagcctg agtgcaagtg
      841 acttcgatgg tggcgctgtg gcagagagtc tccgctttac acctacctca cctctgaagg
      901 actatgatcc acagggtatt aaacggaaca ggttcagaac tggcgttcgg tttgtttcgg
      961 aaacagacga catggtccag ctccatacct ttcatcagtc cctccgtgac ctcagtagtg
     1021 aacaagttcg gcttggagat gatttcaaca aggagctttt cagaagaagc cggtccgatg
     1081 ctgaaacaaa aagggtgtta gaagaattga ccgaaaagct taacgaggcc cagaaacaag
     1141 atgtggtttc agatcgagtg gagcggcggc ttcaggaaat agaaagagag atgcgctttg
     1201 aaagagagct ggtggagaga cgccatgatc agctgggact cgtgtccttg aagcttcagg
     1261 aggcactgaa gaaacaagag gctaaaggcg atgagaacga ggacataata aagaacaagc
     1321 tgcgacagac tgaaactgag aagagccaac tggagcagga attggagatc tcgcgcaggc
     1381 tgctgagcca atctgaaggg agtagagaaa cgcttttgca tcaggtggaa gaactgcgta
     1441 cacaacttat taaagcagaa ggtgaccaaa ggggtttgca gcatcaagta tcttgcattt
     1501 ccaagcaacc gtcaagccac caggatgatc aaggggatga ccggaggttt agaagaggag
     1561 tagagcggga gaaacagaat ctggagaagc agatggcaga tctgcgagtg cagctcaact
     1621 tcaacgccat ggcttctgag ttggaggaag tgaagcggtg catggaccgg aaagacctgg
     1681 agaaagcaaa cttggcagcc aaaatagaga atctaacacg tgacttggag aacagggaaa
     1741 aacaacagct gcagatgttg gatcaactta cggagatcca gaatcacttt gagacctgtg
     1801 aggccactcg taagcagacc gacctccaga tctcagagct gagtcagcac gcagaggaag
     1861 cgaccaagca ggctgagcac taccttagtg agttccagag gtcggaagcc ctgcgagagg
     1921 aggctgagaa gaggagagag gacctgaaag cgaaggccca ggacgccatc cggcagtgga
     1981 agctgaagca caagaaattg gaacggtcaa tggagaaaca aggtgaaacc cttgtccagc
     2041 tgacagagaa gaacaaccag gttctgaaag agagggatga attgaaaggc cagctttgtg
     2101 cagcgttaca gcagatagag aatctcagga aggaacttaa tgatgtctta agcaagcgtg
     2161 ccctgcagga cgaggagctt cactgtaagg agaagaaact gaatgacatt gagtcccacc
     2221 gagctgaact tgaactggag gtcaagaatt ccctggacac catccacaga ctagaaaatg
     2281 agttgaaaag acagagtatg attcaaaacc agatcaaagc agaaaaattt cacctggagg
     2341 aagaaattac agagctaaag gagagccagt cccaagacaa agtcaaactt cttgagatgc
     2401 aggagtccat caaggacctg agtgccgtcc gagcagatct cgctaataga ttggctgagg
     2461 aagagagagc caagaaagct gcattcaggg acctttctga gctgacggcc caggtaaaat
     2521 cgaaggaaga agagactgtg actgctgtca cacagttaaa gttagagcga gacgttcacc
     2581 agagggagct ggaggacctc acctcatcgt tggagagtgt gaaggtgaag cacgagcaga
     2641 atatccagga gctgatgagg cactttaaga acgagaagag tgaagcggag agccatatca
     2701 ggacgctgga ggcagaaagc ttggaagata agaaagtggc taaagcccat ctcggtcagc
     2761 tagagaagtt gaaatccaag tgcgagaaac tggcggagga attaacccag aatgaaaatg
     2821 agaacaagaa actgaagcta aaataccaga gtctgaagga ggaactagaa gcaaaggaga
     2881 aacatataag taatgaagag gagcacttaa ggaggatgga agaatccagg ctgcagctca
     2941 aggatcagct tctttgtctg gagacagaac aggaatccat tcttggtgta ataggaaaag
     3001 aaattgatga agcttgtaaa actttctcca gagactcagc agagaaactg aaagtgttta
     3061 cctctggtcc tcaaatacat tatgacccac atcgatggtt agctgaaagc aagaccaagt
     3121 tgcagtggct gtgtgaggaa ctgaaggaga gagagagcag agagaagacc ttgcggcggc
     3181 agctggcggc cagtagacag gagctcaggg agctgacgca gcacaaggag tctgagctcc
     3241 tgtgtctgtt tgagcacatt gagaggcagg aacagcttct ggaggagttc caccaggaga
     3301 agagaggtct gctagaagag actcaaagga aagatgaaga agtggaaact ctccaggacc
     3361 gagtaaatgc attacagatg agtacccgag tggccctgga ccatctggag tctgtgcctg
     3421 agaaactgag cctgctagag gatttcaaag acttcagagg ttcctccagt ttatctgtga
     3481 aaagtgatgg cagatactct aaatacagtc tccacggaga ttctgctcaa cagcgccgag
     3541 atgacaccaa gtacagaatc aagaccttta ggaactcaat gtgtcctctt tctcaggacg
     3601 acagaccctt ttctgccggt tcccacgctc atggcctaga tcactcctcc tcttggcagg
     3661 accacagtcg cttcctgtct actccacagt tttcacactt taactgcttg ccagcattta
     3721 ccaaaagaac cattgcctca gatccagctt caatcaaggg agatgcccca ggtttaccag
     3781 cgaatggaac aagtctacag tccaagaggg aggagtatga gagcaaaaaa tccaaaatgt
     3841 gattcacaac ctcacttgag tatttcccaa gtaacagccc atagtccttg ttgccactgg
     3901 gctcagatta tctaaagaca tcatgtgggt tcagctcctt ggaatcacca agcgttgact
     3961 agcatgacgt tatagccagt ctttgtgagg gagaataaat ttaacttgta gaggtaatat
     4021 caacttatga acgatatata actcacttaa aggcaactgg taccagcaga gaaagtgatc
     4081 atttctacct tatattttcc tatttctcag tgtcacaatt ttccaaccca acctggaatt
     4141 tataatctat gcctttccaa gatgactggc tacaaggaga aggggttccc tccaggcaaa
     4201 tgttcccagc agtttagagt caggcacatt tgtacacggg ggatgtgtaa atgctttctc
     4261 cctcatcgtc atgtgtttta acctgttgtg gagatgcttt ggaatatcag actgcctttt
     4321 caatgcttgt cgtcatcacc tgtcaaatca gcagtctgtt actacatgaa gtatcttcaa
     4381 accattgcaa ttgtcatttt aattgcaaaa gaatttataa aagatagctg aatcatagag
     4441 catcataaag aattcataac atcatttata tatttgtcat gttacggcca cttgtcccac
     4501 tgcgatcatc ctggtcatac gctggatggt ctttggtttg ctgtgacctc aatcccagca
     4561 cccctgtcct gggtcagtca gtgggatcca ctctgtagga atccttatat cctttggtac
     4621 tactgctttc cacatcccag tctttcaaca tcaatgtgct tttaaaacct taccgctccg
     4681 ctgtgcccat caaccagtga atattaaata atggccatca tcctgaaact gagtccaact
     4741 gggccatggt ggaaaaacct gcacagggca ggaacaataa agcaattcct ttgtaagaac
     4801 aatg
//
