LOCUS       XM_056985584            4895 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 128 (Cep128),
            transcript variant X1, mRNA.
ACCESSION   XM_056985584
VERSION     XM_056985584.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985584.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4895
                     /gene="Cep128"
                     /note="centrosomal protein 128; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 22 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     65 samples with support for all annotated introns"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
     CDS             505..3933
                     /gene="Cep128"
                     /codon_start=1
                     /product="centrosomal protein of 128 kDa isoform X1"
                     /protein_id="XP_056841564.1"
                     /db_xref="GeneID:500700"
                     /db_xref="RGD:1595693"
                     /translation="MAESSSDSDHFRYRDRLSRWAARSVQRGIGSRSTVDVTAKVNTI
                     TSTLQDTTRNLRQMDQMLGRYREYSLGQAGAVGQLKEDLEQSINQLRSQRLRRSSGGR
                     SVSVTSLSASDFDGGAVAESLRFTPTSPLKDYDPQGIKRNRFRTGVRFVSETDDMVQL
                     HTFHQSLRDLSSEQVRLGDDFNKELFRRSRSDAETKRVLEELTEKLNEAQKQDVVSDR
                     VERRLQEIEREMRFERELVERRHDQLGLVSLKLQEALKKQEAKGDENEDIIKNKLRQT
                     ETEKSQLEQELEISRRLLSQSEGSRETLLHQVEELRTQLIKAEGDQRGLQHQVSCISK
                     QPSSHQDDQGDDRRFRRGVEREKQNLEKQMADLRVQLNFNAMASELEEVKRCMDRKDL
                     EKANLAAKIENLTRDLENREKQQLQMLDQLTEIQNHFETCEATRKQTDLQISELSQHA
                     EEATKQAEHYLSEFQRSEALREEAEKRREDLKAKAQDAIRQWKLKHKKLERSMEKQGE
                     TLVQLTEKNNQVLKERDELKGQLCAALQQIENLRKELNDVLSKRALQDEELHCKEKKL
                     NDIESHRAELELEVKNSLDTIHRLENELKRQSMIQNQIKAEKFHLEEEITELKESQSQ
                     DKVKLLEMQESIKDLSAVRADLANRLAEEERAKKAAFRDLSELTAQVKSKEEETVTAV
                     TQLKLERDVHQRELEDLTSSLESVKVKHEQNIQELMRHFKNEKSEAESHIRTLEAESL
                     EDKKVAKAHLGQLEKLKSKCEKLAEELTQNENENKKLKLKYQSLKEELEAKEKHISNE
                     EEHLRRMEESRLQLKDQLLCLETEQESILGVIGKEIDEACKTFSRDSAEKLKVFTSGP
                     QIHYDPHRWLAESKTKLQWLCEELKERESREKTLRRQLAASRQELRELTQHKESELLC
                     LFEHIERQEQLLEEFHQEKRGLLEETQRKDEEVETLQPNLLFKLPPWEEASQSAVNSQ
                     NASHLEDKADRVNALQMSTRVALDHLESVPEKLSLLEDFKDFRGSSSLSVKSDGRYSK
                     YSLHGDSAQQRRDDTKYRIKTFRNSMCPLSQDDRPFSAGSHAHGLDHSSSWQDHSRFL
                     STPQFSHFNCLPAFTKRTIASDPASIKGDAPGLPANGTSLQSKREEYESKKSKM"
ORIGIN      
        1 caaagagcca agcggcggcg gcgcgtcctg tgctctagcc gcgcctgggc ggctagttca
       61 agttgccata gctgcgagtc ccgggtgagc ggagtcggtt gcgaggcagc gttgggtcag
      121 ttgcaccttc ggggtcgctg gtagccgcgg gagccgggta gggcctcggc gatgatccgg
      181 cgttaagaac ttggagtcac cttgggtcta aggtgttttt gggggaagcg tagagacaac
      241 cagaaaggtc atctactcga ctcgacctct tgccctgaac ctcatgaaga aatgatagga
      301 ggcaagcacc ctgagctcca aggacggcaa cgcagagttc tgggagtaca ctttgggttc
      361 caccagatgc tggagtctga gcagctccca ttgctcagag tgactgaaat tcctaacaga
      421 agtcttagag cgcacctgtg agactcatgc cgaaaagtat ctcactgaaa gtatgtaatc
      481 ctagctgggg atttgtatac atcaatggca gaatcatcca gtgattccga ccacttccgc
      541 tatcgtgaca gattgagtcg atgggcagcc aggtcagttc aaaggggaat tggaagtcgt
      601 tctacagtag atgtcaccgc aaaggtcaac accataacca gtactttaca ggacaccact
      661 cggaatctgc gacaaatgga tcagatgctt gggcgatatc gagaatacag ccttggacag
      721 gcgggcgctg ttgggcagtt aaaggaagat ttggagcagt caataaacca gctgaggagt
      781 cagcgcttac ggagaagctc aggagggaga agtgtttctg tcaccagcct gagtgcaagt
      841 gacttcgatg gtggcgctgt ggcagagagt ctccgcttta cacctacctc acctctgaag
      901 gactatgatc cacagggtat taaacggaac aggttcagaa ctggcgttcg gtttgtttcg
      961 gaaacagacg acatggtcca gctccatacc tttcatcagt ccctccgtga cctcagtagt
     1021 gaacaagttc ggcttggaga tgatttcaac aaggagcttt tcagaagaag ccggtccgat
     1081 gctgaaacaa aaagggtgtt agaagaattg accgaaaagc ttaacgaggc ccagaaacaa
     1141 gatgtggttt cagatcgagt ggagcggcgg cttcaggaaa tagaaagaga gatgcgcttt
     1201 gaaagagagc tggtggagag acgccatgat cagctgggac tcgtgtcctt gaagcttcag
     1261 gaggcactga agaaacaaga ggctaaaggc gatgagaacg aggacataat aaagaacaag
     1321 ctgcgacaga ctgaaactga gaagagccaa ctggagcagg aattggagat ctcgcgcagg
     1381 ctgctgagcc aatctgaagg gagtagagaa acgcttttgc atcaggtgga agaactgcgt
     1441 acacaactta ttaaagcaga aggtgaccaa aggggtttgc agcatcaagt atcttgcatt
     1501 tccaagcaac cgtcaagcca ccaggatgat caaggggatg accggaggtt tagaagagga
     1561 gtagagcggg agaaacagaa tctggagaag cagatggcag atctgcgagt gcagctcaac
     1621 ttcaacgcca tggcttctga gttggaggaa gtgaagcggt gcatggaccg gaaagacctg
     1681 gagaaagcaa acttggcagc caaaatagag aatctaacac gtgacttgga gaacagggaa
     1741 aaacaacagc tgcagatgtt ggatcaactt acggagatcc agaatcactt tgagacctgt
     1801 gaggccactc gtaagcagac cgacctccag atctcagagc tgagtcagca cgcagaggaa
     1861 gcgaccaagc aggctgagca ctaccttagt gagttccaga ggtcggaagc cctgcgagag
     1921 gaggctgaga agaggagaga ggacctgaaa gcgaaggccc aggacgccat ccggcagtgg
     1981 aagctgaagc acaagaaatt ggaacggtca atggagaaac aaggtgaaac ccttgtccag
     2041 ctgacagaga agaacaacca ggttctgaaa gagagggatg aattgaaagg ccagctttgt
     2101 gcagcgttac agcagataga gaatctcagg aaggaactta atgatgtctt aagcaagcgt
     2161 gccctgcagg acgaggagct tcactgtaag gagaagaaac tgaatgacat tgagtcccac
     2221 cgagctgaac ttgaactgga ggtcaagaat tccctggaca ccatccacag actagaaaat
     2281 gagttgaaaa gacagagtat gattcaaaac cagatcaaag cagaaaaatt tcacctggag
     2341 gaagaaatta cagagctaaa ggagagccag tcccaagaca aagtcaaact tcttgagatg
     2401 caggagtcca tcaaggacct gagtgccgtc cgagcagatc tcgctaatag attggctgag
     2461 gaagagagag ccaagaaagc tgcattcagg gacctttctg agctgacggc ccaggtaaaa
     2521 tcgaaggaag aagagactgt gactgctgtc acacagttaa agttagagcg agacgttcac
     2581 cagagggagc tggaggacct cacctcatcg ttggagagtg tgaaggtgaa gcacgagcag
     2641 aatatccagg agctgatgag gcactttaag aacgagaaga gtgaagcgga gagccatatc
     2701 aggacgctgg aggcagaaag cttggaagat aagaaagtgg ctaaagccca tctcggtcag
     2761 ctagagaagt tgaaatccaa gtgcgagaaa ctggcggagg aattaaccca gaatgaaaat
     2821 gagaacaaga aactgaagct aaaataccag agtctgaagg aggaactaga agcaaaggag
     2881 aaacatataa gtaatgaaga ggagcactta aggaggatgg aagaatccag gctgcagctc
     2941 aaggatcagc ttctttgtct ggagacagaa caggaatcca ttcttggtgt aataggaaaa
     3001 gaaattgatg aagcttgtaa aactttctcc agagactcag cagagaaact gaaagtgttt
     3061 acctctggtc ctcaaataca ttatgaccca catcgatggt tagctgaaag caagaccaag
     3121 ttgcagtggc tgtgtgagga actgaaggag agagagagca gagagaagac cttgcggcgg
     3181 cagctggcgg ccagtagaca ggagctcagg gagctgacgc agcacaagga gtctgagctc
     3241 ctgtgtctgt ttgagcacat tgagaggcag gaacagcttc tggaggagtt ccaccaggag
     3301 aagagaggtc tgctagaaga gactcaaagg aaagatgaag aagtggaaac tctccagccg
     3361 aatctgctat ttaagcttcc accttgggaa gaagctagtc agtctgcagt gaattctcag
     3421 aatgcatctc atttggaaga taaagcagac cgagtaaatg cattacagat gagtacccga
     3481 gtggccctgg accatctgga gtctgtgcct gagaaactga gcctgctaga ggatttcaaa
     3541 gacttcagag gttcctccag tttatctgtg aaaagtgatg gcagatactc taaatacagt
     3601 ctccacggag attctgctca acagcgccga gatgacacca agtacagaat caagaccttt
     3661 aggaactcaa tgtgtcctct ttctcaggac gacagaccct tttctgccgg ttcccacgct
     3721 catggcctag atcactcctc ctcttggcag gaccacagtc gcttcctgtc tactccacag
     3781 ttttcacact ttaactgctt gccagcattt accaaaagaa ccattgcctc agatccagct
     3841 tcaatcaagg gagatgcccc aggtttacca gcgaatggaa caagtctaca gtccaagagg
     3901 gaggagtatg agagcaaaaa atccaaaatg tgattcacaa cctcacttga gtatttccca
     3961 agtaacagcc catagtcctt gttgccactg ggctcagatt atctaaagac atcatgtggg
     4021 ttcagctcct tggaatcacc aagcgttgac tagcatgacg ttatagccag tctttgtgag
     4081 ggagaataaa tttaacttgt agaggtaata tcaacttatg aacgatatat aactcactta
     4141 aaggcaactg gtaccagcag agaaagtgat catttctacc ttatattttc ctatttctca
     4201 gtgtcacaat tttccaaccc aacctggaat ttataatcta tgcctttcca agatgactgg
     4261 ctacaaggag aaggggttcc ctccaggcaa atgttcccag cagtttagag tcaggcacat
     4321 ttgtacacgg gggatgtgta aatgctttct ccctcatcgt catgtgtttt aacctgttgt
     4381 ggagatgctt tggaatatca gactgccttt tcaatgcttg tcgtcatcac ctgtcaaatc
     4441 agcagtctgt tactacatga agtatcttca aaccattgca attgtcattt taattgcaaa
     4501 agaatttata aaagatagct gaatcataga gcatcataaa gaattcataa catcatttat
     4561 atatttgtca tgttacggcc acttgtccca ctgcgatcat cctggtcata cgctggatgg
     4621 tctttggttt gctgtgacct caatcccagc acccctgtcc tgggtcagtc agtgggatcc
     4681 actctgtagg aatccttata tcctttggta ctactgcttt ccacatccca gtctttcaac
     4741 atcaatgtgc ttttaaaacc ttaccgctcc gctgtgccca tcaaccagtg aatattaaat
     4801 aatggccatc atcctgaaac tgagtccaac tgggccatgg tggaaaaacc tgcacagggc
     4861 aggaacaata aagcaattcc tttgtaagaa caatg
//
