LOCUS       XM_006242504            5216 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centrosomal protein 126 (Cep126),
            transcript variant X1, mRNA.
ACCESSION   XM_006242504
VERSION     XM_006242504.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242504.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006242504.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5216
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5216
                     /gene="Cep126"
                     /note="centrosomal protein 126; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 19 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:315409"
                     /db_xref="RGD:1563556"
     CDS             615..3971
                     /gene="Cep126"
                     /codon_start=1
                     /product="centrosomal protein of 126 kDa isoform X1"
                     /protein_id="XP_006242566.1"
                     /db_xref="GeneID:315409"
                     /db_xref="RGD:1563556"
                     /translation="MLAGRPGAQSAGAGLGAGPRDALGARDSGGRPRPGAYLDTKIHL
                     EKNLEEERQILLQQQKLCRNRARKYFMESNRRRKAFEEKRQKQEEREYQIREQILQQR
                     KQKFEEVTEKFQRAHVPVSQRRRAVPPLEEALKQIQESNLKPEVNISLSHRPATNWRA
                     IDSALPSALSKNDYKHQKPLVRRINHNKEMKENNIASLATNRNVLQLKLEETQKLLEN
                     QHLSDLQKFCDEVNQIANSETLSSTDSLEAGEREEIYITLSMEPSTSTQQNSVPLKSA
                     NLQSAHLNCFDEDKLSFSKTQHINNWLTNLDAQNTQPVVSFSDILIKSNILPSWECLN
                     SKEQNPPALNRAVGRATRTTSDSVVFVCSPSVVALDKKENTAENNTVRTNDPTNGALQ
                     RERPPRTESPTFQVSRAWTTPESLTQEATLFSIQERPSKLTWESKTTSSPASSAPVLS
                     PDSQSGGPLAENNTQIKEIDPVQCSDKLDELKDIKHERIIHPNCDKEKSLLSDNFQTT
                     CALQISNSNDTKQKESGPSAPLCACPPDCDQHSVKHNIHDQNGVQLLKSILKKESRYE
                     HNYLRALVMNQGFKFRHHKAGSIRDSIELTKQKGKGTEISKTSKKLRWFDESANIENG
                     VNNSHPMKNRAGMAPQCFQHCHPNSVTCNLTSFPECPVHSAGGKKAKADSVSENVTDL
                     GGYEMDSVPLNSSESSGYSFAKQAWSPCRKEESKSPVHASDSKIQKAKPQRGTKFTRR
                     TGSAKVQKSLVHVNRKPTVSQPQSSGKANTLAQTQGKLIIPHPPSKPPTNIKGGKNMQ
                     ASPCQSAIPEYSQNVVTQSTASVLPTEYHLNQGTQESSLSFPDTCSNLPAVSPALPTP
                     CSSECQSSAKVNSNGTAFQKDGAVYCTQRSPVCEESYQSLIHRNTEEESILPWRRRIN
                     GRQNERTTDSTVTRRKQIVENKWKKLLEQKRKTSGSVGIKHTEQITHFGQNVPPSTSE
                     PIQATRGVKSEEVSDSTSEVLVAENLMNSSLPEDEILTGINSKQLQKPNLSQTSTICA
                     LSAEEQKILQSLHHLDERLYSPSLPPPVSLRSIPPPPPFRKDEASKRQPPNTTKEDTI
                     RQGKGPHTNAGQGSPVGGSVPRAGKTVIFF"
ORIGIN      
        1 tgcgtaattc aggtaaacct cagctcgcct cagtttacct tagcctgcct ctgcttaatt
       61 aggtttgatc tcagtttgcc tcagtttacc tcatctcatt tcagtacacc tgtttaattc
      121 cgcttgcctc cgtttatttc aactttcttt cgtttacttc agtttacctc agctttcttt
      181 atctcacctc agtgtgcttc aggctacttc ctcttacctt agcttgcctc aacttgactc
      241 ggtttaaccc cggctcgcct cagtttacct cagcttgcct ccgccgggct ttgaaccagc
      301 cggcacctca ttggccgctt cctcctccca gccccgcccc gcgttccgcc tggtttccgt
      361 cgcgaaggac gcggcgtcgg ttggttgtca agatggctgc ggcggggtcg cggccgctac
      421 ctccgccgtc gccccgcgag gtcgcctccc tcgccgctgc catcgccaca gtcgccgggg
      481 ccgctgcgaa gctaggactg ctgcagccga gcctgcgacg cccgtgacgc ggggccttgg
      541 agacgcgcgg cccggagcgc cgaggagagg accaggaagg ccgagcggcc atgcgggcgg
      601 cacttaggtg aaggatgctg gcgggcaggc ccggagccca gagcgcaggc gcgggcctgg
      661 gcgccggacc ccgggacgcg cttggcgccc gggacagcgg cgggcgaccg cgacccggcg
      721 cctacctaga tacgaaaatc catctcgaga aaaatttaga agaagaacgc cagatactac
      781 tacagcaaca aaaactatgc cggaatcgag cacgtaaata tttcatggag tcaaaccgga
      841 gaagaaaagc ttttgaggag aaacgtcaaa agcaagaaga aagagaatat caaattagag
      901 aacagatcct gcagcagagg aagcaaaagt ttgaagaagt tactgaaaaa ttccagcgtg
      961 cccatgttcc tgtttcccag agaaggagag cagttcctcc attagaagag gccctaaaac
     1021 aaattcaaga atccaactta aaaccagaag taaacatttc tctttcccac aggccagcaa
     1081 caaactggcg agctatagat tctgccttgc cttcagcgtt gtcaaaaaat gattacaagc
     1141 atcaaaaacc tctcgtacgc agaattaacc ataataaaga aatgaaggaa aacaacatag
     1201 caagcctggc tactaacaga aatgtgctcc agcttaaact ggaggagaca cagaagctcc
     1261 tcgagaatca gcatttaagt gatctgcaaa aattttgtga tgaagttaat cagatagcca
     1321 attctgaaac tctctcaagt acagacagtc ttgaggctgg agagcgtgaa gaaatataca
     1381 tcacacttag tatggagcct tccacatcaa cccagcagaa ctctgttccc ctcaagtcag
     1441 caaatctaca gtcagctcat ttaaactgct ttgatgaaga caaactgtca ttctctaaaa
     1501 ctcagcatat aaacaattgg cttacaaact tagatgctca aaatactcag cctgttgtat
     1561 ctttttcaga tattttaatt aaatctaata ttctgccttc atgggaatgt ttgaatagta
     1621 aagaacaaaa tccacctgct ttgaatagag ctgtaggaag agccacaaga actactagtg
     1681 actcagtggt ctttgtgtgc agcccttctg tagttgcact agataaaaaa gaaaacactg
     1741 ctgaaaataa tactgtgagg acaaatgatc ctactaatgg agcactccaa agggagaggc
     1801 cgccacgaac tgagtcccca acatttcaag tcagtcgagc ctggactact ccagaatctc
     1861 taacccagga agcaactttg ttttccatcc aagagagacc ttccaagtta acttgggaaa
     1921 gcaaaactac ttcaagtcct gcttcatctg caccagtttt gtcgcctgat tcacagtcag
     1981 gtgggccgtt agcagagaac aacacacaaa taaaagaaat tgaccctgtg cagtgttctg
     2041 ataagttaga tgaattgaaa gatatcaaac atgaaaggat aattcatcct aactgtgata
     2101 aagaaaagtc tttactttca gacaattttc agaccacctg tgcacttcaa atttctaatt
     2161 caaatgatac aaaacaaaaa gagagtggcc catcagcacc attgtgtgcc tgccctcctg
     2221 attgtgacca gcacagtgtg aaacacaaca tccatgatca aaatggggtg cagctgctta
     2281 agagtatatt aaagaaagaa tccagatatg aacataatta tttgagggca ttagttatga
     2341 atcaaggttt taagtttaga caccacaagg caggaagtat tagagatagt attgaattaa
     2401 caaaacagaa agggaaaggt acagaaatat caaagactag taaaaaactg cggtggtttg
     2461 atgaaagtgc taacatagaa aatggtgtaa ataatagcca cccgatgaag aacagagcag
     2521 gaatggctcc acagtgcttc cagcactgtc accccaacag tgtcacctgc aacctgacca
     2581 gttttcctga atgtcctgta cattctgctg gtggaaagaa agccaaggct gattctgtct
     2641 ctgagaatgt tactgattta ggaggatatg aaatggacag tgtgcctttg aactcttctg
     2701 aatcttcagg ctatagcttt gccaaacaag cctggtcacc ctgcagaaag gaagagagca
     2761 aatcccctgt acatgctagt gactctaaga tccaaaaggc taagcctcag aggggaacaa
     2821 aattcacgag aagaacaggg tctgcaaagg tccagaaaag ccttgtacat gtaaacagaa
     2881 aacccactgt tagccagcca cagtcttcag gcaaagccaa cacactggcc caaactcagg
     2941 gtaaactaat tatacctcat cctccatcta aaccaccaac aaacattaaa ggtggtaaaa
     3001 atatgcaagc gtctccatgc caatcagcca tacctgaata ttctcaaaat gttgtaactc
     3061 agagcacagc atccgtgctt ccaacagagt accatttgaa ccaggggact caagaaagta
     3121 gtctctcatt cccagacact tgttctaacc tccctgctgt gagcccagct ctaccaactc
     3181 cttgctcttc tgagtgccaa tcctcagcaa aagtcaactc aaatggcaca gctttccaga
     3241 aagatggagc agtgtattgt acccaaagaa gtcctgtttg tgaagaaagc taccaatctt
     3301 tgattcatag gaatactgaa gaagaatcaa ttctcccatg gagaagaaga atcaatggac
     3361 gccaaaatga gaggaccact gattctactg ttacaagaag aaagcaaatt gttgaaaata
     3421 aatggaaaaa actgttagag cagaaaagga aaacctctgg atcagtagga ataaagcaca
     3481 ccgagcaaat aactcatttt ggacaaaatg tcccaccaag tacaagtgaa ccaatacaag
     3541 ctacaagagg tgtcaagtct gaagaagttt cagatagtac ttctgaggtt ttggtggcag
     3601 aaaacctcat gaattcttca ctgcctgaag atgaaattct gactggcata aacagcaagc
     3661 agttacagaa accaaatctg tcccaaacgt ccactatctg tgccctctca gctgaggagc
     3721 agaagatcct gcagtctctc catcacctcg atgaaaggct gtactctcct tccctcccac
     3781 ctcctgtctc ccttagatcc attcccccac cgcctccctt cagaaaagat gaggcctcca
     3841 agagacaacc accaaacacg acaaaagaag atacaataag acaaggcaaa ggccctcaca
     3901 ccaatgctgg acaaggcagc ccagtaggag gaagcgtccc aagagcaggc aaaactgtaa
     3961 ttttttttta aatgccaaga aagagtcatt ctggtctctg cagcttcccc ccattgctcc
     4021 ctgggaactt gtcttctata ctggaactct ttggggttcc cattgttctt gccaccttac
     4081 ctgcctcttt cctgactatt cttcaggaca tgactgcaag cttccacatg ggaagcctat
     4141 tgcagcccaa gctttctcca tgttggcccc tctgcagtct gaccaactct ggttctccct
     4201 gtgcatctgt cactctgata ggaccacagc tagaaaaaag aaggtagctc ctgaggcagc
     4261 aggtgaactg cgcaatataa cggagtcacc atgagaccac caaggcctta taattgctta
     4321 ggtgtaaatt atcaaagcaa accccctacc aatcttagaa ttttcatttt agagcatctt
     4381 atttagtttt aaaataaaaa atttaatgaa tttttaagaa gcaagttatt tcttcggcct
     4441 aaaatatatg ttaaacatcc ccagaatctt acctggcttc caagtatttc tgtaaaaacc
     4501 aaacaaggaa ggaaggaagg ttacacttag ccatttacac aatagctagc caaaagtttc
     4561 tctgcattgg atggtggttt ttgagacgga catcatagct agccatgaac acttggtcct
     4621 cctgcgtctc actcccaaga gctgagagta tagcggtgca caccacacct ggcctttgaa
     4681 agctactctt aaggctctgg agaggtggct cagtggcccg gtagtgaagt cctgctgcac
     4741 agcgtaaagg cctgagttca gatcccagca cccacataaa aatgatatgt agtttgtggg
     4801 tcagccctta ggcacagaaa cagtcagcca aaatggtgat cttcaggttc agtgagaaaa
     4861 gaccctgtct caaaacagta ataatagtaa attaagttgg agagagaaaa aagtgcctaa
     4921 aaccaacctc cggcctgcac gtgcacatgg agacaagcac atctgcccac gcacgaccac
     4981 gccacacacg cactcaaagg aaattcctat aaagcacata ttaccaatag taaaatatga
     5041 aaattgtgca ttactttcca tacaatgccc tataaagagt ggtgtgcagc atcattgaaa
     5101 tttgtgtatg tactattttg atttgagttt tagtcttctt aaaagctgtg atctaaaagg
     5161 agaatgacct gtgaacatct gcagacatga cagttaagag aaccctctga cctctc
//
