LOCUS       NM_001246319            1636 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus centromere protein W (Cenpw), mRNA.
ACCESSION   NM_001246319 XM_001070657 XM_002725457
VERSION     NM_001246319.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Prendergast,L., van Vuuren,C., Kaczmarczyk,A., Doering,V.,
            Hellwig,D., Quinn,N., Hoischen,C., Diekmann,S. and Sullivan,K.F.
  TITLE     Premitotic assembly of human CENPs -T and -W switches centromeric
            chromatin to a mitotic state
  JOURNAL   PLoS Biol 9 (6), e1001082 (2011)
   PUBMED   21695110
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Kim,H., Lee,M., Lee,S., Park,B., Koh,W., Lee,D.J., Lim,D.S. and
            Lee,S.
  TITLE     Cancer-upregulated gene 2 (CUG2), a new component of centromere
            complex, is required for kinetochore function
  JOURNAL   Mol Cells 27 (6), 697-701 (2009)
   PUBMED   19533040
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC129114.1.
            
            On or before Oct 11, 2011 this sequence version replaced
            XM_001070657.2, XM_002725457.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC129114.1, EV767419.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..1636
                     /gene="Cenpw"
                     /gene_synonym="CENP-W"
                     /note="centromere protein W"
                     /db_xref="GeneID:689399"
                     /db_xref="RGD:1593465"
     exon            1..234
                     /gene="Cenpw"
                     /gene_synonym="CENP-W"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..375
                     /gene="Cenpw"
                     /gene_synonym="CENP-W"
                     /note="cancer-up-regulated gene 2 protein"
                     /codon_start=1
                     /product="centromere protein W"
                     /protein_id="NP_001233248.1"
                     /db_xref="GeneID:689399"
                     /db_xref="RGD:1593465"
                     /translation="MVLSTTVCRRIRRKAPCAFLKRTLKQKKPRLSLEKRCDLLIHLN
                     CLLFVQKLAEESRTNACESKSGVIKKDHVQAAAKVILKKSRG"
     exon            235..348
                     /gene="Cenpw"
                     /gene_synonym="CENP-W"
                     /inference="alignment:Splign:2.1.0"
     exon            349..1601
                     /gene="Cenpw"
                     /gene_synonym="CENP-W"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagattcaaa tcaaccgctc tggagtcccg ggaggtaagc agtgagtgag tctgaggaga
       61 gcggccccgt gatcgcggaa gccggggctg tggaaagtgc gacgggccgc taagatggtg
      121 ctctccacca cagtctgtag gcggataagg cgcaaggcgc cctgcgcctt cctcaagcgc
      181 accttaaagc agaagaagcc gcggctcagt ctggagaagc gctgcgatct cctgatccat
      241 ttgaattgcc tactctttgt tcagaaattg gcagaagagt ctaggacaaa tgcttgtgaa
      301 agtaaatctg gagttatcaa aaaggatcat gtacaggcgg cagcaaaggt aattctgaag
      361 aagagcagag gataggtgtt aacatgtgct taagaattat atgatgtgtt aatttaagtc
      421 ataacagatc ataaaaacac ttcgtatgta tcagtttata ttgtggatta ttaaaacttt
      481 gtatgtacat tttattgctt ttaaggaatt atgctttatt cattaatggc ttctgagttt
      541 tgtgttgctg tgttgttgct tagtgtgtca aaaataaaat catgctacat tgaatagctt
      601 gaagagatgt gtgctccttc gattgaagct ttgaatttag caaaaattat gcagtgaatt
      661 taatttctga gaaagcaaca tacagtaaaa tctgggtaca ttttaagtat gttaattttg
      721 gatgcattca gaaagcacta gttttgtgtt atactaatag taatagtaaa atttctaaac
      781 gagaagatag taagcatcag ctaaagtttt tacaaacttg tttttgtcta taaaccacaa
      841 acaagaagat gtgaatcaag cgaatcaaac tgacatactt tcttcaggat ttagtagata
      901 aagcattttc catggcagtc ttttggaagt ttattgcata ttatccaaat tttttttttc
      961 tttttttcgg agttggggac cgaacccagg gccttgcgct tgctaggcaa gcgctctact
     1021 actgagctaa atccccaacc cttattatcc aatttttact tttatatttt tgttctgaga
     1081 taattccggt aatgtatgaa gttgcagaac taatatgaac atacattgca caccaaacac
     1141 tcagtttcct cactgcttat atagaacata tggtgtaaca tatcaaaagc aaggacttgt
     1201 taattggaac agtatgtatg tggcttcgtg ctattttatc atgtgtgccg attcatgcaa
     1261 ttatgtatga ccaatgtata gaacgagctc agtactccag agggcccgtt gattctgtct
     1321 tatagtcacc cagctgcctc actaccacct aactcttcat acctcgctac cataccaact
     1381 ctcctccagc tctgcagcgc tgagatggaa gcgtgttgac agaagcattg gagatgctct
     1441 cactcagtgt aataccttgt gctctgttcc agaaattgca tgacttccct gctgagtggt
     1501 gcggacgcac catgttttta tggttgtttg cttattgaag agcattttgc tttgtccaat
     1561 aaaatttcta tgaatggttg taaacattgt tttaaaatgt gaaaaaaaaa aaaaaaaaaa
     1621 aaaaaaaaaa aaaaaa
//
