LOCUS       NM_001398871            1004 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus centromere protein V (Cenpv), mRNA.
ACCESSION   NM_001398871 XM_039087272
VERSION     NM_001398871.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Honda,Z., Suzuki,T. and Honda,H.
  TITLE     Identification of CENP-V as a novel microtubule-associating
            molecule that activates Src family kinases through SH3 domain
            interaction
  JOURNAL   Genes Cells 14 (12), 1383-1394 (2009)
   PUBMED   19930468
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Tadeu,A.M., Ribeiro,S., Johnston,J., Goldberg,I., Gerloff,D. and
            Earnshaw,W.C.
  TITLE     CENP-V is required for centromere organization, chromosome
            alignment and cytokinesis
  JOURNAL   EMBO J 27 (19), 2510-2522 (2008)
   PUBMED   18772885
REFERENCE   3  (bases 1 to 1004)
  AUTHORS   Cronshaw,J.M., Krutchinsky,A.N., Zhang,W., Chait,B.T. and
            Matunis,M.J.
  TITLE     Proteomic analysis of the mammalian nuclear pore complex
  JOURNAL   J Cell Biol 158 (5), 915-927 (2002)
   PUBMED   12196509
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 27, 2021 this sequence version replaced XM_039087272.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ196070.1, SRR22582424.1326510.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-380               JAXUCZ010000010.1  47727300-47727679   c
            381-479             JAXUCZ010000010.1  47724687-47724785   c
            480-549             JAXUCZ010000010.1  47722355-47722424   c
            550-664             JAXUCZ010000010.1  47716064-47716178   c
            665-1004            JAXUCZ010000010.1  47713778-47714117   c
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q23"
     gene            1..1004
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /note="centromere protein V"
                     /db_xref="GeneID:501702"
                     /db_xref="RGD:1565681"
     exon            1..380
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..789
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /note="proline rich 6; proline-rich polypeptide 6"
                     /codon_start=1
                     /product="centromere protein V"
                     /protein_id="NP_001385800.1"
                     /db_xref="GeneID:501702"
                     /db_xref="RGD:1565681"
                     /translation="MRRTRSAVATDPREQRRSGASGGLSGGESRARRYQSRTRAGGGG
                     GAASSQLSSKPRPKPPPRALAAAAEEPPPADTPAASVSAFDLGEQRERWETFQKRQRL
                     SFEGAAKLLLDTFEYQGLVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHF
                     IVPASRFKLLKGAESITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDE
                     GTVRSVVTEEFNGSDWERAIKEHKTIKNMSKE"
     exon            381..479
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /inference="alignment:Splign:2.1.0"
     exon            480..549
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /inference="alignment:Splign:2.1.0"
     exon            550..664
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /inference="alignment:Splign:2.1.0"
     exon            665..1004
                     /gene="Cenpv"
                     /gene_synonym="Prr6; RGD1565681"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagctgaga ggcctgtgag cccagctgag ggagacatgc ggcggactcg cagcgcggtg
       61 gccactgacc cgcgggagca gcggcgctcg ggggcctccg ggggcctgag cggcggcgaa
      121 agccgcgcgc ggcgctacca gagcaggact agggccgggg gcgggggcgg ggcggccagt
      181 tcgcagctgt cctcaaagcc gcggcccaag ccaccgccgc gggccctggc ggcggccgcg
      241 gaggagccgc cgccggcgga cacccccgcc gcctcggtgt cggcgttcga cctgggggag
      301 cagcgggagc gctgggagac gttccagaag cggcaacggc tcagcttcga gggcgccgcc
      361 aagctgctgc tggacacctt tgagtaccag ggcctggtga agcacacagg aggctgccac
      421 tgtggagcag ttcgttttga agtttgggct tcggcagact tacacatctt tgactgcaac
      481 tgtagcattt gcaagaagaa gcagaataga cacttcattg ttccagcttc tcgcttcaaa
      541 ctcctgaagg gtgctgagag cataaccacc tacacattta acacgcacaa agcccagcac
      601 accttctgta agagatgcgg tgtccagagc ttctataccc cacgctccaa ccctgggggc
      661 tttggtatcg caccccactg cctggatgaa ggcactgtgc gcagcgtggt caccgaggaa
      721 ttcaacggca gtgactggga gcgagctata aaggagcaca agaccatcaa gaacatgtct
      781 aaggagtgag cagggcagta gccctgtggg ttgcatgggt gtgtgtcgct gtgcaggcct
      841 gggctgccat ctccactccc catgtccctg cagttcgctc cagccaccat ttctttaggc
      901 agctctgccc ctaacccagg tttcatgtaa acagttaacc ttctcccttc ctaccaactt
      961 ttatgtgatc ttttagaaaa taaacatttc tgacattaat gcta
//
