LOCUS       NM_001419500            1396 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus centromere protein Q (Cenpq), transcript variant
            1, mRNA.
ACCESSION   NM_001419500 XM_039083825
VERSION     NM_001419500.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Bancroft,J., Auckland,P., Samora,C.P. and McAinsh,A.D.
  TITLE     Chromosome congression is promoted by CENP-Q- and CENP-E-dependent
            pathways
  JOURNAL   J Cell Sci 128 (1), 171-184 (2015)
   PUBMED   25395579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Apr 4, 2023 this sequence version replaced XM_039083825.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.718169.1,
                                           SRR26643293.49446.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-93                JAXUCZ010000009.1  27454339-27454431
            94-237              JAXUCZ010000009.1  27456744-27456887
            238-292             JAXUCZ010000009.1  27457099-27457153
            293-419             JAXUCZ010000009.1  27458149-27458275
            420-488             JAXUCZ010000009.1  27459179-27459247
            489-618             JAXUCZ010000009.1  27463610-27463739
            619-738             JAXUCZ010000009.1  27467372-27467491
            739-816             JAXUCZ010000009.1  27467628-27467705
            817-1396            JAXUCZ010000009.1  27468792-27469371
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q13"
     gene            1..1396
                     /gene="Cenpq"
                     /note="centromere protein Q"
                     /db_xref="GeneID:363198"
                     /db_xref="RGD:1359451"
     exon            1..93
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            94..237
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..948
                     /gene="Cenpq"
                     /note="isoform 1 is encoded by transcript variant 1;
                     CENP-Q"
                     /codon_start=1
                     /product="centromere protein Q isoform 1"
                     /protein_id="NP_001406429.1"
                     /db_xref="GeneID:363198"
                     /db_xref="RGD:1359451"
                     /translation="MSGKANTSKKKSQRVKRNVKQRADKEDEELDSPENKVGNRAKRN
                     RSHAGHLSSKVTEQTKCVHLKRVKISSNKRTAWQPLPKNTEEYLQSMMDSAILGILNK
                     NIKRKEQIQYHLDQLKKRFLQQCATLKVPPGKLNYLRDMSKLLKVEREQERANEESLA
                     SLQEEIDKIVETTESMTENIESLKTKIEILTNEVEKEEEEMKEVFHIDSNKVLALPEL
                     SQKSLKAPILQKEILTLIPNQNALLKDLDVLQNSAPGKNMAAFIQEAYMKLNGS"
     exon            238..292
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            293..419
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            420..488
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            489..618
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            619..738
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            739..816
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            817..1396
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctttgagt cgatgaagaa acagagaaga gtcgaagtgc ttaagcggct gacagatcca
       61 gagcggatta attttgagct tcacgactta gtgactatgt gtcattgtga ctgtactgtt
      121 tagatcaaaa tgtctggtaa agcaaatact tctaagaaaa aatctcaacg ggtgaaaaga
      181 aatgtaaaac aaagagccga taaagaagat gaggaattgg attcaccaga gaataaggtt
      241 ggaaacagag cgaaaagaaa cagaagtcat gcaggacatc tgtcctctaa agtaacagaa
      301 caaacaaaat gtgttcatct aaaacgggtg aaaatatcat ccaacaagag aacagcctgg
      361 caacctcttc caaagaatac tgaagagtat ttgcaaagta tgatggactc agcaattctt
      421 ggaattttaa acaaaaacat taaaagaaaa gaacaaattc agtatcatct cgaccagttg
      481 aagaaaagat ttctgcaaca gtgtgcaaca ctgaaagtcc ccccaggaaa gctcaactat
      541 ttaagagata tgtcaaagct gctgaaggtg gaaagggaac aggaaagggc gaatgaggag
      601 agcctggctt cactgcagga agaaatagac aaaatagtag agaccacaga gtcaatgact
      661 gagaatattg aaagcctaaa gaccaaaatt gaaatcctaa caaatgaagt agagaaagaa
      721 gaagaggaga tgaaagaggt atttcacata gatagcaata aagtattggc tcttccagaa
      781 ctttctcaga aaagtcttaa agcacctata cttcagaaag aaattttaac actaattcca
      841 aaccagaatg ctcttctgaa ggacttggat gttcttcaga attcagcccc agggaagaac
      901 atggcagcct tcattcaaga agcgtatatg aaacttaatg gctcctaaag agttggtttt
      961 tattttggta tttaagcctt gttccatgtt aacttattgt tcatgaattg taaaactttt
     1021 atctttttat gacagtctct cactctgttt gtagcctagg ctggctcaac acttactctt
     1081 atctcccact ttggccttga actcactgca gtcctgcccc agcatggtga gtgctaggat
     1141 tacaggtgtg agtttcacat ctggcccaaa ggtgtgcaac ttacctgtat taatacttca
     1201 aagctgatgt ctctgcagaa caattaccct ctgttatcta ctttaaacta gcctttgtgg
     1261 gcttatcatt agtatctaat gtcctgaaaa catagcagtc accaaatcta gtaaatccat
     1321 agaaagagag agatatttcc taaaaccatg cactgagaat tattttcaaa aataaaaaaa
     1381 atgtcatgat gtaata
//
