LOCUS       NM_001014215            1390 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus centromere protein Q (Cenpq), transcript variant
            2, mRNA.
ACCESSION   NM_001014215 XM_343538
VERSION     NM_001014215.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Bancroft,J., Auckland,P., Samora,C.P. and McAinsh,A.D.
  TITLE     Chromosome congression is promoted by CENP-Q- and CENP-E-dependent
            pathways
  JOURNAL   J Cell Sci 128 (1), 171-184 (2015)
   PUBMED   25395579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Apr 4, 2023 this sequence version replaced NM_001014215.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082113.1, SRR26360186.2240401.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-93                JAXUCZ010000009.1  27454339-27454431
            94-237              JAXUCZ010000009.1  27456744-27456887
            238-292             JAXUCZ010000009.1  27457099-27457153
            293-413             JAXUCZ010000009.1  27458155-27458275
            414-482             JAXUCZ010000009.1  27459179-27459247
            483-612             JAXUCZ010000009.1  27463610-27463739
            613-732             JAXUCZ010000009.1  27467372-27467491
            733-810             JAXUCZ010000009.1  27467628-27467705
            811-1390            JAXUCZ010000009.1  27468792-27469371
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q13"
     gene            1..1390
                     /gene="Cenpq"
                     /note="centromere protein Q"
                     /db_xref="GeneID:363198"
                     /db_xref="RGD:1359451"
     exon            1..93
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            94..237
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..942
                     /gene="Cenpq"
                     /note="isoform 2 is encoded by transcript variant 2;
                     CENP-Q"
                     /codon_start=1
                     /product="centromere protein Q isoform 2"
                     /protein_id="NP_001014237.1"
                     /db_xref="GeneID:363198"
                     /db_xref="RGD:1359451"
                     /translation="MSGKANTSKKKSQRVKRNVKQRADKEDEELDSPENKVGNRAKRN
                     RSHAGHLSSKEQTKCVHLKRVKISSNKRTAWQPLPKNTEEYLQSMMDSAILGILNKNI
                     KRKEQIQYHLDQLKKRFLQQCATLKVPPGKLNYLRDMSKLLKVEREQERANEESLASL
                     QEEIDKIVETTESMTENIESLKTKIEILTNEVEKEEEEMKEVFHIDSNKVLALPELSQ
                     KSLKAPILQKEILTLIPNQNALLKDLDVLQNSAPGKNMAAFIQEAYMKLNGS"
     exon            238..292
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            293..413
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            414..482
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            483..612
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            613..732
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            733..810
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
     exon            811..1390
                     /gene="Cenpq"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctttgagt cgatgaagaa acagagaaga gtcgaagtgc ttaagcggct gacagatcca
       61 gagcggatta attttgagct tcacgactta gtgactatgt gtcattgtga ctgtactgtt
      121 tagatcaaaa tgtctggtaa agcaaatact tctaagaaaa aatctcaacg ggtgaaaaga
      181 aatgtaaaac aaagagccga taaagaagat gaggaattgg attcaccaga gaataaggtt
      241 ggaaacagag cgaaaagaaa cagaagtcat gcaggacatc tgtcctctaa agaacaaaca
      301 aaatgtgttc atctaaaacg ggtgaaaata tcatccaaca agagaacagc ctggcaacct
      361 cttccaaaga atactgaaga gtatttgcaa agtatgatgg actcagcaat tcttggaatt
      421 ttaaacaaaa acattaaaag aaaagaacaa attcagtatc atctcgacca gttgaagaaa
      481 agatttctgc aacagtgtgc aacactgaaa gtccccccag gaaagctcaa ctatttaaga
      541 gatatgtcaa agctgctgaa ggtggaaagg gaacaggaaa gggcgaatga ggagagcctg
      601 gcttcactgc aggaagaaat agacaaaata gtagagacca cagagtcaat gactgagaat
      661 attgaaagcc taaagaccaa aattgaaatc ctaacaaatg aagtagagaa agaagaagag
      721 gagatgaaag aggtatttca catagatagc aataaagtat tggctcttcc agaactttct
      781 cagaaaagtc ttaaagcacc tatacttcag aaagaaattt taacactaat tccaaaccag
      841 aatgctcttc tgaaggactt ggatgttctt cagaattcag ccccagggaa gaacatggca
      901 gccttcattc aagaagcgta tatgaaactt aatggctcct aaagagttgg tttttatttt
      961 ggtatttaag ccttgttcca tgttaactta ttgttcatga attgtaaaac ttttatcttt
     1021 ttatgacagt ctctcactct gtttgtagcc taggctggct caacacttac tcttatctcc
     1081 cactttggcc ttgaactcac tgcagtcctg ccccagcatg gtgagtgcta ggattacagg
     1141 tgtgagtttc acatctggcc caaaggtgtg caacttacct gtattaatac ttcaaagctg
     1201 atgtctctgc agaacaatta ccctctgtta tctactttaa actagccttt gtgggcttat
     1261 cattagtatc taatgtcctg aaaacatagc agtcaccaaa tctagtaaat ccatagaaag
     1321 agagagatat ttcctaaaac catgcactga gaattatttt caaaaataaa aaaaatgtca
     1381 tgatgtaata
//
