LOCUS       NM_001399806            2227 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus centromere protein O (Cenpo), mRNA.
ACCESSION   NM_001399806 XM_003750123
VERSION     NM_001399806.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Jan 14, 2022 this sequence version replaced XM_003750123.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.26628.1,
                                           SRR22582424.879604.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-219               JAXUCZ010000006.1  32937635-32937853   c
            220-342             JAXUCZ010000006.1  32937417-32937539   c
            343-509             JAXUCZ010000006.1  32934895-32935061   c
            510-624             JAXUCZ010000006.1  32927183-32927297   c
            625-884             JAXUCZ010000006.1  32926300-32926559   c
            885-1059            JAXUCZ010000006.1  32924967-32925141   c
            1060-2227           JAXUCZ010000006.1  32923129-32924296   c
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..2227
                     /gene="Cenpo"
                     /note="centromere protein O"
                     /db_xref="GeneID:684439"
                     /db_xref="RGD:1590328"
     exon            1..219
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     exon            220..342
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     CDS             297..1196
                     /gene="Cenpo"
                     /codon_start=1
                     /product="centromere protein O"
                     /protein_id="NP_001386735.1"
                     /db_xref="GeneID:684439"
                     /db_xref="RGD:1590328"
                     /translation="MESANSLCPGTECKGGVLAHLERLEAQMNRSNRKSEEPTVREKE
                     SSLRTKIRELQQQRDRLRVEVKQWRARVKESSAKEDSSKTTLSEQEVLEKQWRNLKAI
                     LQAYRFTGLSGKLTNRRVCVYISTAFEGNLLDSYFVDLAIEKPLRIHHHSIPAFIPLE
                     KIATAYLQTDVQRLLFSLSEYLNAYVGRKYQADQLESDFCAFLTGPLQRSALCNLLSF
                     TYKVEHGTQAFSFSARLLYEDLTAALPTGVTVTRPAGVEASSPHWEEHRASHEMLFRT
                     KTLHQAFASFSKETEMLHLNLVS"
     exon            343..509
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     exon            510..624
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     exon            625..884
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1059
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
     exon            1060..2227
                     /gene="Cenpo"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acgctgggat cagcaagttg cgtttttgaa gttgcgctcg gcgggaattc ttagaactgg
       61 atcttggatc ttgagcgggg aagcgttgat gagaaatcaa gacccagtgg tagaccgatt
      121 agcattaatg tacagcttct ttgggtattt gaggaagccc ggctggaccg tagtggccac
      181 ggcggtgaag taggcgtgga caaggctgac cagtaccagt taagatcgtt cgggtccatg
      241 ttaaacctgc cctgtccgtc cacttgagaa aaagcacttg agaaccctaa gagaagatgg
      301 aatctgcaaa ttctttgtgt ccaggcacag agtgtaaagg aggtgtttta gctcacctgg
      361 aaagactaga ggctcaaatg aacagatcga atagaaagtc tgaagaacca acagttcgtg
      421 aaaaggaaag ttctcttaga accaagattc gagaactgca gcaacagcga gataggctga
      481 gggtggaagt gaagcagtgg cgagccagag ttaaagaatc ttctgccaaa gaagactcaa
      541 gcaaaaccac gcttagtgaa caggaagttc tggaaaagca gtggagaaac ctgaaagcca
      601 ttctgcaggc atatcgattt acagggctca gcgggaagtt gaccaaccgt agagtctgtg
      661 tgtacatcag caccgccttt gaggggaacc tactagattc ctactttgtg gacctcgcca
      721 tagagaaacc actccggatt catcaccatt ccatcccagc cttcatccct ctggaaaaga
      781 tagccacagc atacctacag actgacgttc agcgcctcct gtttagtctc tcggagtacc
      841 taaatgccta cgtgggaagg aagtatcagg cagaccaact tgagagtgac ttctgcgctt
      901 tcctcacggg acctttgcag agaagcgccc tgtgcaactt gctgtcattc acctataaag
      961 tggaacacgg gacccaggcc ttctccttta gtgccaggtt gctgtatgag gacctcacag
     1021 cagctcttcc cacaggagtc actgtgacaa ggccagcagg tgtggaagca tcgtcccctc
     1081 attgggaaga gcacagagca tcccatgaaa tgctcttccg taccaagacc ctgcaccagg
     1141 cgtttgcttc attttccaaa gagacagaaa tgctgcattt gaacctggtc tcctgaaaag
     1201 ctttctctgt ttgggaccat ctaaagtgag cacacttgtg ctgcctgcaa tcaggacctg
     1261 tcagcaaaag ctgttgggag agcttgcgtg ggtaccactg taagaacaga tacccacgtc
     1321 ctgggaatca ccaggagcct gtgtgtagac atagacaagt ccatgtctgt aggcactggg
     1381 tgattcagac agtcctccat gattgcctgt tcactcggta cagtgctcca gagttgtctc
     1441 ttcctcctat aagtaccagt gttgatttga ccgtatgtat atatattctt gctgaaaatc
     1501 agctaaaatg ggggtaactg aagacatttc ataagcatct ctagctttgg tgggagccat
     1561 caatctctgg tagggcttat agttaagaag gggaagaact ttttagtcta gggtttggag
     1621 cagcatgttc taggccactc tttggtgaga ggcagtattt ttatacttgg ggtttctgta
     1681 tacttagtat tatttcctat aacaattggg cagagaacgg aatgcatgaa gtcactttca
     1741 ggacgcactg ttggaaatat gcacatcgat gaggggagcc tccccgtcat gtctccctcc
     1801 tgcatgctcc aggcatggct gtgatcttcc cacttcctag acactttaat acgccttttc
     1861 tcttcaacca tggggctgtg gtgtgcaaca tgtactgttc ctcagcttag ggcttcttga
     1921 catcgttagg cctgtctgct agtcacgttc tgccgttaca attccttccc ttcctctgct
     1981 agtcccaaat aggatcgcta ttccacaggc ccagcttttg ggcttcactc taaattagct
     2041 gctccctaga aatctccatg tgagggagct ccggcaaact ccctgaagaa tgcatggatg
     2101 gtaagccagc atgggtcccc ctgacagagg tttggggtgg gaagtctgtg tcacagtaac
     2161 agaattgcca caacagtccc atcaagttga gtaaagcttt taataaaaca gtcctgttct
     2221 ttatcaa
//
