LOCUS       XM_039101934             747 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus centromere protein K (Cenpk),
            transcript variant X3, mRNA.
ACCESSION   XM_039101934
VERSION     XM_039101934.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..747
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /note="centromere protein K; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 3 long SRA reads"
                     /db_xref="GeneID:294712"
                     /db_xref="RGD:1310461"
     CDS             160..654
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /codon_start=1
                     /product="centromere protein K isoform X3"
                     /protein_id="XP_038957862.1"
                     /db_xref="GeneID:294712"
                     /db_xref="RGD:1310461"
                     /translation="MVRSIVQSENEKLKEDLAREQQWLDEQQQILETLNVLHSDLKNR
                     VVTFTESRIFNELKAKILSIKEFKEKLLLALGDFLEDHFPLPDGNTQKKRKNIQELNT
                     QLITLNEMLEMLINRMFDVPHDPYVKINESFWPPYIELLLRYGIALRHPEDPSRIRLE
                     AFHQ"
     polyA_site      747
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtgtcagaa taaattatca cttattggac ccgagacact cactaactca aatgctcagc
       61 tctcattact tattatgcaa gtgaaatgtt tgactgctga acttggtcaa tggaacaaaa
      121 gaaaacccga aattccaaaa gttgagatat gatcttgaaa tggtacggtc tatcgttcaa
      181 tcagagaatg aaaagttaaa agaagactta gcaagggagc aacagtggtt ggatgaacag
      241 cagcaaatac tggaaactct taatgtatta cacagtgact tgaaaaatcg ggttgtaaca
      301 tttactgaat caagaatttt taatgaactg aaagccaaga tccttagtat aaaagaattt
      361 aaagagaagc tcctacttgc cttgggtgat tttttagaag atcattttcc actgcctgat
      421 ggaaatactc aaaagaaaag gaaaaatatt caagaattga atacacagct gataacactg
      481 aatgaaatgt tagagatgct tataaataga atgttcgatg ttccacatga tccatatgtt
      541 aaaattaatg aatccttttg gccaccatat attgaactgc ttctgcgtta tggaattgct
      601 ttgagacatc cagaagatcc atcccgaata agattagaag ccttccatca gtaaaatgat
      661 ggtctgtctt cacacagtat ggaatcttta cactctcgga taaacaaatc acaagacttt
      721 aaataaagaa tattatttgc aaatcaa
//
