LOCUS       NM_001399198             968 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus centromere protein K (Cenpk), transcript variant
            1, mRNA.
ACCESSION   NM_001399198 XM_006231888
VERSION     NM_001399198.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Yamashita,A., Ito,M., Takamatsu,N. and Shiba,T.
  TITLE     Characterization of Solt, a novel SoxLZ/Sox6 binding protein
            expressed in adult mouse testis
  JOURNAL   FEBS Lett 481 (2), 147-151 (2000)
   PUBMED   10996314
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 4, 2022 this sequence version replaced XM_006231888.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.717165.1,
                                           SRR26360194.424207.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                JAXUCZ010000002.1  37094267-37094303
            38-176              JAXUCZ010000002.1  37096311-37096449
            177-233             JAXUCZ010000002.1  37098244-37098300
            234-306             JAXUCZ010000002.1  37100803-37100875
            307-353             JAXUCZ010000002.1  37106514-37106560
            354-436             JAXUCZ010000002.1  37111771-37111853
            437-535             JAXUCZ010000002.1  37111939-37112037
            536-662             JAXUCZ010000002.1  37112330-37112456
            663-716             JAXUCZ010000002.1  37115076-37115129
            717-968             JAXUCZ010000002.1  37119237-37119488
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q13"
     gene            1..968
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /note="centromere protein K"
                     /db_xref="GeneID:294712"
                     /db_xref="RGD:1310461"
     exon            1..37
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            38..176
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..875
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /note="isoform 1 is encoded by transcript variant 1;
                     SoxLZ/Sox6 leucine zipper binding protein in testis"
                     /codon_start=1
                     /product="centromere protein K isoform 1"
                     /protein_id="NP_001386127.1"
                     /db_xref="GeneID:294712"
                     /db_xref="RGD:1310461"
                     /translation="MSENQQHIDPDVIAAKDTEEELIKQCEEMWKDVEECQNKLSLIG
                     PETLTNSNAQLSLLIMQVKCLTAELGQWNKRKPETVPLTEGVLLTLGKEEFQKLRYDL
                     EMVRSIVQSENEKLKEDLAREQQWLDEQQQILETLNVLHSDLKNRVVTFTESRIFNEL
                     KAKILSIKEFKEKLLLALGDFLEDHFPLPDGNTQKKRKNIQELNTQLITLNEMLEMLI
                     NRMFDVPHDPYVKINESFWPPYIELLLRYGIALRHPEDPSRIRLEAFHQ"
     exon            177..233
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            234..306
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            307..353
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            354..436
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            437..535
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            536..662
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            663..716
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
     exon            717..968
                     /gene="Cenpk"
                     /gene_synonym="Solt"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgttgacag gaacgctgag gggactgggg gaccgagttg ttgcagtaag gtgaagaaaa
       61 ctatacagaa aatgtcagag aatcaacaac acatagatcc agatgtgatc gctgctaaag
      121 atacagagga agaacttatc aaacaatgcg aagaaatgtg gaaagacgtg gaagaatgtc
      181 agaataaatt atcacttatt ggacccgaga cactcactaa ctcaaatgct cagctctcat
      241 tacttattat gcaagtgaaa tgtttgactg ctgaacttgg tcaatggaac aaaagaaaac
      301 ccgaaacagt tcccctcact gaaggcgttt tgttaacatt aggaaaagaa gagttccaaa
      361 agttgagata tgatcttgaa atggtacggt ctatcgttca atcagagaat gaaaagttaa
      421 aagaagactt agcaagggag caacagtggt tggatgaaca gcagcaaata ctggaaactc
      481 ttaatgtatt acacagtgac ttgaaaaatc gggttgtaac atttactgaa tcaagaattt
      541 ttaatgaact gaaagccaag atccttagta taaaagaatt taaagagaag ctcctacttg
      601 ccttgggtga ttttttagaa gatcattttc cactgcctga tggaaatact caaaagaaaa
      661 ggaaaaatat tcaagaattg aatacacagc tgataacact gaatgaaatg ttagagatgc
      721 ttataaatag aatgttcgat gttccacatg atccatatgt taaaattaat gaatcctttt
      781 ggccaccata tattgaactg cttctgcgtt atggaattgc tttgagacat ccagaagatc
      841 catcccgaat aagattagaa gccttccatc agtaaaatga tggtctgtct tcacacagta
      901 tggaatcttt acactctcgg ataaacaaat cacaagactt taaataaaga atattatttg
      961 caaatcaa
//
