LOCUS       XM_006257215            3231 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus centromere protein I (Cenpi),
            transcript variant X1, mRNA.
ACCESSION   XM_006257215
VERSION     XM_006257215.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257215.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257215.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3231
                     /gene="Cenpi"
                     /gene_synonym="Fshprh1; LRPR1; RNALRP"
                     /note="centromere protein I; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 14 ESTs, 1 long SRA read, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 31 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:25448"
                     /db_xref="RGD:2631"
     CDS             338..2575
                     /gene="Cenpi"
                     /gene_synonym="Fshprh1; LRPR1; RNALRP"
                     /codon_start=1
                     /product="centromere protein I isoform X1"
                     /protein_id="XP_006257277.1"
                     /db_xref="GeneID:25448"
                     /db_xref="RGD:2631"
                     /translation="MATPRLTRNSQQQNRISQGSNSRQTTLLDWKVKDKAGNSKSVLE
                     ESSSLEDSNHADDQTEDALQTAVEYFQKGPKKASLSKDSVLEKHLKTVENVAWNNGLA
                     PEAIDILLNVALSGKFGNALSTRILKCMIPETHISEDSVVKAVSWLCVGKCSGNTKVL
                     FYRWLVAMFDFIDHKKQINSLYGFFFVSLQDDTLCPYVCHLLYLLTKKENVKPFRARK
                     LLDLQAKMGMQPHLQALLSLYKFFAPTLISVSLPVRKKIFFNNSKNLWTPALLAVKLR
                     NQGIFPEPLKLQLGPTSGRSLKRKWNYHSVIPAVNSAKKECREKMSLFDYLSNDRSLP
                     VEQLQSFPQLLENIHCLELPSQMSSVLNSSLLLHYVNCVKDESILLRLSYWLSQTLQE
                     ECVWYNMNDYQQEKEFINFLDMVIRVQCFLQEGFYSCEAFLYKSLPLWDGFSCRSQFL
                     KLLAWIPFSSFSEIKPLLLDHLAPLFFTSSIYFKCSLLQCLKDLLQNWLLWLSTEAQV
                     QPMTDSPLETTLGGSMDSVSQLIEYIGWLSMVAIRLESSSTLLLHFILDFYEKVCDIY
                     INYDLPLVVLFPPVVFHSAFLSLDATILNQLCYIMYRYRDNLTAAKKKDLVQKAKSEF
                     SISSKICKEFNYYLTALVHCLWSSRPFETGVYIDPQIIENTGETQYKHNLNFVHHPCL
                     LNYAASFLLQESPEEMPVHLSSIRGKKWNWYLDHLYSEGFQGLNLFIKSSIDHSSVSK
                     TEKNT"
ORIGIN      
        1 tttggctgaa ctaactcctc cgcagccgcg gtctcttagg aggcgcatgc gcggggcggg
       61 tcccgcgcct ttgaatctca gaggcggctt ttgggcttcg gaggctgtgt agtagcagag
      121 gttctctagg taaattgccc agcggctggt gttgaggtgg agactcagag atcttctgga
      181 atcctgttac tcagggtctg cccaagtaca tatgctgctg aatggagctt ccagtctgcc
      241 tctaaatgag tatctttttt tacactttta cacagcatag gcctactgta ggccagttat
      301 ctgttttctt tgccaacacc tgaacattaa tacagggatg gcaactccaa ggcttactag
      361 aaactcccaa caacaaaaca gaatttctca aggcagtaat agtcgtcaga ccactctctt
      421 agactggaag gtgaaagaca aagcaggcaa ctccaagagt gtcttggaag aaagtagttc
      481 cctggaagat tctaaccacg ctgacgatca aactgaagac gctctgcaga cagcagtaga
      541 atacttccag aaaggcccta agaaagcttc actgagtaaa gattcggtct tggaaaaaca
      601 cttgaaaact gtggaaaatg tggcttggaa caatggctta gccccagaag caattgatat
      661 tttattgaat gtggcactca gtggcaagtt cgggaatgct ctaagcacac ggattttaaa
      721 gtgcatgatt ccagaaactc acatatcaga agattctgtg gttaaggcag tatcctggct
      781 ctgtgttggg aagtgttctg gtaataccaa ggtacttttt tatcgttggt tggttgcgat
      841 gtttgatttt attgatcata agaagcaaat taattcgctg tatggcttct tttttgtttc
      901 attgcaagat gatactctgt gcccttatgt ttgccatttg ttatatttac tgaccaaaaa
      961 ggaaaatgtc aaaccatttc gtgcgagaaa attgcttgat ctccaggcca aaatgggaat
     1021 gcagcctcat ctccaggctt tgctgtcact gtataagttc ttcgctccta ccctgatttc
     1081 tgtatctttg cctgtaagga agaagatctt ttttaataat tcaaaaaatc tatggactcc
     1141 agctctcctt gctgtgaagc taaggaatca aggaattttt ccagaacctc taaagcttca
     1201 attaggtccc acttccggcc gttctctaaa aagaaaatgg aattatcact cagttatacc
     1261 agcagtaaat tctgctaaga aagaatgcag agaaaagatg agcctttttg attatctcag
     1321 caatgataga tcacttccag tagaacaact gcaaagtttc cctcagcttt tagagaacat
     1381 tcattgctta gagctgcctt ctcagatgag ctcagtgcta aacagctctc tgctacttca
     1441 ctatgtcaac tgtgtcaaag atgagtcaat cttactcagg ctttcttatt ggctgagtca
     1501 aacattacaa gaagagtgtg tgtggtataa tatgaatgat tatcaacaag aaaaggagtt
     1561 tataaacttt ctggacatgg tcatcagggt gcagtgcttc ttacaagagg gattttactc
     1621 ctgtgaggca ttcctgtata aaagcctgcc tctctgggat ggcttctctt gtcggtcaca
     1681 gttccttaag cttctggcct ggattccatt cagtagcttc tctgagataa agccacttct
     1741 tcttgatcat ctagcacctc tcttctttac atcatccatt tatttcaagt gcagtcttct
     1801 tcaatgtctg aaagacttac tgcagaattg gctgttgtgg ctctctacag aagcacaggt
     1861 gcagcccatg acagacagtc ctctggagac aactttgggt ggatccatgg attctgtgtc
     1921 tcagttgatt gagtacatag gctggctgtc catggtggca atacgcctgg agagcagcag
     1981 tacattacta ttgcacttta ttttggactt ctatgagaag gtgtgtgaca tatatataaa
     2041 ttatgacctt ccattggtgg tgttgtttcc tcctgtggtc tttcattctg cattcctaag
     2101 cttggatgcc actatcttga accaactctg ttacataatg tacaggtatc gcgataattt
     2161 gacagctgct aagaaaaagg accttgtaca gaaggcaaag tcagagttca gtattagcag
     2221 caagatctgt aaagaattta attactattt gacagctctg gttcattgcc tatggtcatc
     2281 cagaccattt gaaacaggag tgtacattga tccccaaatc atagaaaata ctggagaaac
     2341 acagtataaa cacaacttaa attttgtgca ccatccttgt ctattgaact atgcagcttc
     2401 ctttttgcta caggagagcc cagaagaaat gccagtccac ctgagctcta tccggggaaa
     2461 gaaatggaac tggtatttgg accatttata ttcagagggt tttcaaggct taaacctttt
     2521 cataaaaagt agtatcgatc attcttctgt atccaaaaca gagaaaaaca cataaacatt
     2581 gacataaaca aatgccatac tggactaaat gtctcactgc tggagagact aagtacctcg
     2641 catgactttc catatccgtt tcataagccg actgccatct ttaagaagta ctaagcctgg
     2701 ccttccttcc gtccatggct caagagagcc ttggtgtcca ctaacttcat tttagtcttc
     2761 agatattaag gttactaatg aaaaataacc tcttcatcat ccagttctgc tttcactgaa
     2821 ttatacatga agagacacat atgtctgctt tctagtagga aatttgcttt gcattttcgt
     2881 cggctttgtt agtggaagag aacaagtaat ataaattaag ctactcctca gacacactta
     2941 tgcagaatac tctgcaatct ctgaaatcct aggaatagtt tacatttcta agatactaat
     3001 agtagaatgc aacatgtgtg actcttaaca tcccaagaag ctgatggcta tctgcctgca
     3061 ttggcagtaa ttgtaaggga agggaggagg gggaaatgaa gaaatttcat tttattggtt
     3121 tgattttatg acagcactat atttgaatgt atatgtatat gtatgtattt atgtatttaa
     3181 ttcagatttt aaattgccag gcttaaataa actaacttca gttttacctt c
//
