LOCUS       NM_001398796            1201 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus centrosomal AT-AC splicing factor (Cenatac),
            mRNA.
ACCESSION   NM_001398796 XM_001060013
VERSION     NM_001398796.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Dec 23, 2021 this sequence version replaced XM_001060013.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.998379.1,
                                           SRR22582419.57614.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-178               JAXUCZ010000008.1  53639473-53639650   c
            179-342             JAXUCZ010000008.1  53639235-53639398   c
            343-441             JAXUCZ010000008.1  53638647-53638745   c
            442-508             JAXUCZ010000008.1  53635638-53635704   c
            509-571             JAXUCZ010000008.1  53635504-53635566   c
            572-636             JAXUCZ010000008.1  53635183-53635247   c
            637-742             JAXUCZ010000008.1  53634962-53635067   c
            743-773             JAXUCZ010000008.1  53634588-53634618   c
            774-863             JAXUCZ010000008.1  53633291-53633380   c
            864-996             JAXUCZ010000008.1  53633055-53633187   c
            997-1201            JAXUCZ010000008.1  53632777-53632981   c
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..1201
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /note="centrosomal AT-AC splicing factor"
                     /db_xref="GeneID:689046"
                     /db_xref="RGD:1597440"
     exon            1..178
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..1057
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /note="coiled-coil domain-containing protein 84;
                     coiled-coil domain containing 84; rCG58288-like"
                     /codon_start=1
                     /product="centrosomal AT-AC splicing factor"
                     /protein_id="NP_001385725.1"
                     /db_xref="GeneID:689046"
                     /db_xref="RGD:1597440"
                     /translation="MAPPQRCPLCRQTFFCGRGHVYSHKHQRQLKGALERFLPQVEAA
                     RRAVRAAQVECYVPEHDRCCWCPCCGCEVRKHLSHGNLTVLHGGLLEHLASPEHKKAT
                     NKFWWENKAHAQVKEKFLISPPDYARFKKSMVKGLDSYEEREDEVIKEMAAQIREVEQ
                     SRQEVVRSVLEPQAESDPEEGSSAPESWKAANGHGASSSQQVSHLDLQPVAELDWMET
                     GPHLTFIGHQDTPGVGNIHSGATPPWMIQEEEHSSGSLPIGPSYEEFLKEKEKQKLKK
                     LPPDRVGANFDHSSNTSAGWLPSFGRVWNNGRRWQSRHQFKTEAAARSRQPHKGKS"
     exon            179..342
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            343..441
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            442..508
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            509..571
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            572..636
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            637..742
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            743..773
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            774..863
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            864..996
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
     exon            997..1201
                     /gene="Cenatac"
                     /gene_synonym="Ccdc84"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggttagtg ggtggtgaca agccgctgct ggtggcggtg ttcgccggtc ctgggtctat
       61 ggcgccaccc cagagatgtc ctctgtgtcg gcagactttc ttctgtggtc gcgggcacgt
      121 ttacagccac aagcaccagc ggcagttgaa gggggctctg gagcggtttc taccgcaggt
      181 ggaggccgcc cgcagggccg tccgcgccgc ccaggtggag tgctatgtcc cggagcacga
      241 ccggtgctgt tggtgcccgt gttgtggctg cgaagtgcga aaacacctga gccatggaaa
      301 cctgacagtg ctacacgggg gtctgctgga acatctggcc agcccagaac ataagaaagc
      361 caccaacaaa ttctggtggg agaacaaggc ccatgcccag gtgaaagaga agtttctgat
      421 ctcccccccg gattatgcac ggtttaagaa atcgatggtg aagggcttgg actcctatga
      481 ggaaagggag gatgaggtga ttaaagagat ggcagctcag atccgtgagg tagaacagag
      541 tcggcaggaa gtggtccgat ctgtcttaga gcctcaggca gagtcagatc cagaagaggg
      601 ttcttcggca cctgaaagtt ggaaagctgc caatggccat ggagcctcca gctcacagca
      661 ggtatcacac ttggacttgc aacctgttgc agagcttgat tggatggaga caggaccgca
      721 cctaacattc attgggcatc aggatacacc cggagttggt aacattcact caggtgccac
      781 acctccatgg atgatccaag aggaggagca cagctctgga agcctcccaa taggaccctc
      841 ctatgaagaa tttcttaaag aaaaggaaaa gcaaaaactg aagaaactcc ctccagatag
      901 agttggggcc aactttgatc acagttccaa caccagtgca ggctggctgc cctcttttgg
      961 cagagtctgg aataatggac gccgctggca gtccaggcat caattcaaaa ctgaagctgc
     1021 agcaagaagc aggcagccac ataaagggaa aagctgaagg ttcccagtct gttccgatct
     1081 catgggttaa caaacccatt ccagccagct attattccta agaccaaatc ctctccagct
     1141 gcctgaggaa acagatgcac ccattcattt gattcaataa agttttattt tcccaaatgt
     1201 a
//
