LOCUS       NM_001398650             985 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus CEBPZ opposite strand (Cebpzos), transcript
            variant 6, mRNA.
ACCESSION   NM_001398650 XM_017594390
VERSION     NM_001398650.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 22, 2022 this sequence version replaced NM_001398650.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK841438.1, SRR26643290.21929.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115, SAMN16676784
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG   :: upstream AUG and CDS
                                                  extension is not conserved
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-518               JAXUCZ010000006.1  21891557-21892074   c
            519-634             JAXUCZ010000006.1  21890287-21890402   c
            635-679             JAXUCZ010000006.1  21889648-21889692   c
            680-764             JAXUCZ010000006.1  21888939-21889023   c
            765-985             JAXUCZ010000006.1  21887701-21887921   c
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..985
                     /gene="Cebpzos"
                     /note="CEBPZ opposite strand"
                     /db_xref="GeneID:103692531"
                     /db_xref="RGD:9177508"
     exon            1..518
                     /gene="Cebpzos"
                     /inference="alignment:Splign:2.1.0"
     exon            519..634
                     /gene="Cebpzos"
                     /inference="alignment:Splign:2.1.0"
     CDS             520..762
                     /gene="Cebpzos"
                     /codon_start=1
                     /product="protein CEBPZOS"
                     /protein_id="NP_001385579.2"
                     /db_xref="GeneID:103692531"
                     /db_xref="RGD:9177508"
                     /translation="MARTMEPLAKKIFKGVLAAELVGVFGAYFLFKKMNSSQDFRQTM
                     SKTFPFILEVYYKSIEQSGMYGVREKDQQKWLDSKN"
     exon            635..679
                     /gene="Cebpzos"
                     /inference="alignment:Splign:2.1.0"
     exon            680..764
                     /gene="Cebpzos"
                     /inference="alignment:Splign:2.1.0"
     exon            765..985
                     /gene="Cebpzos"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttggaacct tgccgggcac tagccccggg tcgcagcacc gccctgccgg tcgactttcc
       61 ttcctcgggt caacactgga ggacacacag ggttgcttca cctgcgctgg agccccagcc
      121 gctcctgtgc atgaaggccc ggtggtcttt ggtctccctg ggccatcttg tctgaacagt
      181 gtgtccctgg tgacaatcgg gctttatttt taagtagacc agccccgaag cgcaggacct
      241 tggaatataa catgtccatc tgtttttaag caagtaaatg ttttattaat agcgttattt
      301 ggactgttcg aagagagcat cactctcttc cgatcaaaaa aagattttgc tcagattcct
      361 taagttatgg cacaggcagg tgtgccgtgt ccttgccccg aatccttaaa aaaacgtcct
      421 tgggaacgca gaactgagcg ggactgtcag tgatgttgca gagtactggg aaatcgagga
      481 agacagctct ttccctcctg cctcatcccc aattatatga tggctcggac catggaaccc
      541 ctggcaaaga agatctttaa aggagtttta gctgctgagc tcgtgggcgt ttttggagct
      601 tattttttgt ttaaaaagat gaactcgagc caagatttca ggcaaacaat gagcaagaca
      661 tttcccttca ttttggaagt ttattacaaa tccattgaac agtctggaat gtatggggtt
      721 agagaaaaag atcagcaaaa atggttggat agcaaaaatt aaggatctgg tccccgacta
      781 atgtttatct ctacaagaaa ccaacggtat cactcaggat tacaatccca cagctgacat
      841 ggatggagtt tctactgtgt gaaacaaaat ataaattgta attcagatct tattctttgg
      901 ccttgaaaaa gctgactgaa gaatgtttac tgtattatca ataaactttt atttatacta
      961 ctaaaataaa atgtattaaa aactc
//
