LOCUS       NM_001402042            1590 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus CEA cell adhesion molecule 18 (Ceacam18), mRNA.
ACCESSION   NM_001402042
VERSION     NM_001402042.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643288.2172.1,
                                           SRR26643291.1439.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840112, SAMN16676810
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                JAXUCZ010000001.1  103207593-103207679
            88-441              JAXUCZ010000001.1  103209540-103209893
            442-726             JAXUCZ010000001.1  103212405-103212689
            727-1008            JAXUCZ010000001.1  103215238-103215519
            1009-1144           JAXUCZ010000001.1  103218808-103218943
            1145-1590           JAXUCZ010000001.1  103221758-103222203
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1590
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /note="CEA cell adhesion molecule 18"
                     /db_xref="GeneID:502334"
                     /db_xref="RGD:1563539"
     exon            1..87
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1160
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /note="CEA-related cell adhesion molecule 1;
                     carcinoembryonic antigen-related cell adhesion molecule
                     18, pseudogene 1"
                     /codon_start=1
                     /product="carcinoembryonic antigen-related cell adhesion
                     molecule 18 precursor"
                     /protein_id="NP_001388971.1"
                     /db_xref="GeneID:502334"
                     /db_xref="RGD:1563539"
                     /translation="MDFSRPSCNPWRWLTLLASLLTCGICQASGQIFISPDSLMGVEN
                     FRTILTLENVPEDVLEYSWYRGMDNSTGNMIFSYKPPNTRHPGPLYSGRENVTRTGSL
                     VVRMSALNDTGNYTVQVDTSNGTQTATGWLEIIKLRDDPDISANVSANASMLVEGMDS
                     VVANCLTNSSNIKWYVNFVPTSGNNRMTISPDGKTLVIHGVSRYDHSLQCAIEDVPEI
                     LQRSDTISLTVAYGPDYVSLLTEPYAFNGVLRAVIGSYVQLECTGYSRPVVTYHWIHN
                     GSLLSISEKNLTLPSLSWEQMGSYRCIVENLETQLAFYRDVTIQPPLSRPLPTVKREL
                     YIPGYLVIILIILATTGGAYMCRVLVYALQLSCSRRRNLS"
     exon            88..441
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
     exon            442..726
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
     exon            727..1008
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1144
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
     exon            1145..1590
                     /gene="Ceacam18"
                     /gene_synonym="Ceacam18-ps1; RGD1563539"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaacctgcc aagctctgga gaacccaaga agctcatgga cttttccagg cctagctgta
       61 acccctggag gtggctcacc cttttggcca gtttgctgac ctgtggcatc tgccaggcct
      121 ctggtcagat cttcatcagc ccagactcac tcatgggagt ggagaatttc cggaccatcc
      181 tgaccctaga aaatgtccca gaagacgtcc tggagtacag ttggtatcgg ggcatggaca
      241 acagtacagg caacatgatt ttcagctata aacctcccaa tacccgacac cctgggccct
      301 tgtacagtgg gcgtgagaac gtgacccgta caggtagcct ggtggtgagg atgtcggcgt
      361 taaatgacac aggcaactac actgtccaag tggacaccag caacgggacc caaacagcaa
      421 ctggctggct cgagatcata aagttgagag acgacccaga catctcagcc aatgtttcag
      481 ccaacgccag catgttggtg gaaggcatgg actccgtggt tgccaattgt cttaccaact
      541 cctcgaacat caagtggtac gtgaattttg tgccaacctc aggcaataac cgcatgacga
      601 tttccccgga tggcaagact ctggtcatcc acggggtcag tcgttacgac cacagtcttc
      661 agtgtgccat agaagatgtc ccagaaatac tccagagaag tgacacgatt tccttaactg
      721 tggcctatgg accagactat gtgtcactgt tgaccgagcc ctatgccttt aatggcgtgc
      781 tgcgtgctgt tattggttcc tatgtgcagc tggaatgtac cggttactcc aggccggtag
      841 tcacgtacca ctggattcat aacggctccc tcctaagcat ctccgagaag aacttgaccc
      901 tccctagtct gtcctgggaa caaatgggca gttaccggtg tattgtggag aacctggaga
      961 ctcagctggc cttctatagg gatgtcacca tccagccacc tctatctcgg ccactgccta
     1021 ctgtgaaaag agaattatac atcccaggat acttggtgat aatcctcatc atattggcaa
     1081 ccacgggagg tgcctacatg tgtagagtcc tggtctacgc cctgcaacta tcctgctcca
     1141 gaaggagaaa cttgtcataa gtgtccacag aagacctaaa ggacagccca gccagggaag
     1201 gagatgaagg agacgggaga atgagtgccc cctggggacc agctggactg caccagcacc
     1261 acatgtctct ggaacattct ggggaggaca ccatcccagg cttagtgagc tgaagaaatg
     1321 taggctaccg gataaattgg aagactctct gtgggacctg aaggaggggt gacatcgcct
     1381 ggccatcagc agcaccatct gctaagcaga gctggccaag ctgggattgg caatgtgaga
     1441 gttctgggtt ctaattctag agcccgctct ccctccagtg tttccaagct cacatcctta
     1501 ctctgaaact aggggatctt gacaaattct ttgaagatgc ttagatcact gttgccaatg
     1561 acagagaaat gaagcaattt taacttcaga
//
