LOCUS       XM_574528               2569 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus carnitine deficiency-associated gene
            expressed in ventricle 3 like 1 (Cdv3l1), mRNA.
ACCESSION   XM_574528
VERSION     XM_574528.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_574528.8.
            
            On Jan 21, 2021 this sequence version replaced XM_574528.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2569
                     /gene="Cdv3l1"
                     /note="carnitine deficiency-associated gene expressed in
                     ventricle 3 like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 23 ESTs, 2 long SRA
                     reads, 3 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:499235"
                     /db_xref="RGD:1565730"
     CDS             16..495
                     /gene="Cdv3l1"
                     /codon_start=1
                     /product="protein CDV3"
                     /protein_id="XP_574528.1"
                     /db_xref="GeneID:499235"
                     /db_xref="RGD:1565730"
                     /translation="MIEPEKKDPSAHDNQYTKYTEQRKNIKNLQGSGAEKSSGPWNKT
                     ALVQAPPAPVTVTETPEPAMPSGVYRPPGARLTTTRKTPQGPPEIYSDTQFPSLQSTA
                     KHVESRNRDKEMEKSFEVVRHKNRVREEVSKNQALKLELDNQYAVLENQKYSPTQYS"
ORIGIN      
        1 tatacagaac accaaatgat tgaaccggaa aagaaagacc cctcagcaca cgataatcaa
       61 tacactaaat atacagaaca aagaaagaat attaaaaatc tgcaagggag tggagcagaa
      121 aaatcttcag gtccctggaa taaaactgct ctggtacaag cgcctcctgc tccagtaaca
      181 gttacagaaa ccccggagcc agcaatgcct agtggtgtat acaggcctcc tggggcaagg
      241 ctaaccacga caaggaaaac gccacaagga ccaccagaaa tatacagtga cacacagttc
      301 ccatccctgc agtccactgc caagcatgta gagagccgga acagggataa agaaatggag
      361 aagagctttg aagtagtaag acacaaaaat agagttaggg aggaggtttc aaaaaatcag
      421 gcccttaaac ttgagctaga caaccagtat gctgtgcttg agaatcagaa gtacagcccc
      481 acacagtaca gttaaggaat ggtctttgct aagccttcca agataactag accacagcca
      541 acctccaaga acagccattc agcgtcttga tttctggatc tacagtggct gactgaagac
      601 ctcggtccag tggctgtccc tgttgcacta tggaagttca agagtcacga ctgatcttga
      661 tgtgtcttgg atttagggat gttttcattg tcttaaatat ttgtgaatta gattcaacag
      721 tgtttccata gttgctctgc gtataaaacc aaacctgcag ccagtggtca tttcaaacat
      781 ctttatgttc agatactgag ccttcgcaag gttgactacc tcagatttgc tgcacttaaa
      841 tagtggattt catgtggatc acaacttcta cataaggtta cagctattag tgtctgtgtg
      901 aaccttgaaa ccaactctac tggattccta gcagaaagcc ttcagaagtc agccatctgg
      961 gttctgatcc gctgtaaaaa cagaagagtt aagtgacctt aataacctgt tctgtgcccc
     1021 atcctaagga atattctata ggctgtggct gttagacttc ctggaacaag ctgctgtcag
     1081 aaatgatgtg tttggatcat ctgtgtgggg cttatgattt ataatttaag tttttagttg
     1141 tatgaggtaa ctatggattt aattcaacca aacttgggtc caccaaatgg ggagcgggtg
     1201 ggggtagcct tgtttctttg aatacatttt cattcagata gtgcttgtcc agttccacat
     1261 taaggccttg ctttgacttg gagtaagttc tttgagggca tattgtgtgg tgaaatagtc
     1321 tgaaagaagc attggaattg tgagatgccc tatgaatttg ccatccttag gtggaaccag
     1381 gtagctgtag atacatataa aggacagtgg atccgctcca ctccaggtgc tgctcaagcc
     1441 tcctaatcag gtctaaattg aactgctgtg gacagagtgt ggtgtctgct cagaaggggt
     1501 gtttcactga cctggctttt acagttcaaa gtaacgggag caaaaaccac caagttgtga
     1561 atcttgcatg gtgtctgata aatacaatgt gtgccccata ttttaaggtt atgggctatt
     1621 ctggagatcc attcattgtt tagccagctc ttatcattca ccttgggagt atgtttgtat
     1681 tcacttggag agtcagggga atagccagta atgtagcact tctgttgtta gtaattacaa
     1741 tgtaacgatc tagtggtact tggctcttag aagaggtcac agttagattt ctttccacct
     1801 aatgaaatag actgccagtt acctactttc atgctactgc aaatggttca gtacacgtac
     1861 tctacattgg ctatgactgt gtgatataat ggcggtgcct aggtttctct ctgtaaatga
     1921 atccctttgc caaacacagt tcagactcgc tcactactga cagtagtaga accggaatga
     1981 gtgaagtttt cccagcttga gagcatgtct tgcagattag tggattagtg cagcagtatg
     2041 ggaagcagga ggtgcagacc agtgtctcct gaccagactg tatgccactt ctgggcaaca
     2101 gtgttggcat gatctgagcc agccaggagg agggtgggtg attagaagct tgagattctt
     2161 agttatactg aaggcttaat ttgggcacca gaaaacctta acaagtaatc tcacaccttg
     2221 agtcacaatc ttcccttaat gtatgcttta ccccagcttc acacacatag acaaattctg
     2281 ttcggggttc tggtttaaga agtgaacaga gacgtatgac gaggtttgtt taatggcata
     2341 ctgtactgga atgctgaaga cctgcagcag atgtaaattc caagtcttgt tataattttt
     2401 taagattgtg aaatcaaaat gcatatgaat caagttttaa tacactgtct gggtggatga
     2461 ggctgtccat tgcaccattt ctttctttgg gttctcaggc atggttccga cagtgtacga
     2521 actctgtaac attaacattg aatagacagt caacctacaa aaaaaaaaa
//
