LOCUS       NM_001025682            2372 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus cerebellar degeneration-related protein 2 (Cdr2),
            mRNA.
ACCESSION   NM_001025682 XM_219291
VERSION     NM_001025682.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Hwang JY, Lee J, Oh CK, Kang HW, Hwang IY, Um JW, Park HC, Kim S,
            Shin JH, Park WY, Darnell RB, Um HD, Chung KC, Kim K and Oh YJ.
  TITLE     Proteolytic degradation and potential role of onconeural protein
            cdr2 in neurodegeneration
  JOURNAL   Cell Death Dis 7 (6), e2240 (2016)
   PUBMED   27253404
  REMARK    GeneRIF: the role of cdr2 in experimental models of Parkinson's
            disease, is reported.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Corradi JP, Yang C, Darnell JC, Dalmau J and Darnell RB.
  TITLE     A post-transcriptional regulatory mechanism restricts expression of
            the paraneoplastic cerebellar degeneration antigen cdr2 to immune
            privileged tissues
  JOURNAL   J Neurosci 17 (4), 1406-1415 (1997)
   PUBMED   9006982
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098028.1.
            
            On Jul 22, 2005 this sequence version replaced XM_219291.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098028.1, CK596306.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..2372
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /note="cerebellar degeneration-related protein 2"
                     /db_xref="GeneID:308958"
                     /db_xref="RGD:1310578"
     exon            1..154
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1440
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /note="cerebellar degeneration-related 2"
                     /codon_start=1
                     /product="cerebellar degeneration-related protein 2"
                     /protein_id="NP_001020853.1"
                     /db_xref="GeneID:308958"
                     /db_xref="RGD:1310578"
                     /translation="MLADNLVEEFEIEDEPWYDHRDLQQDLQLAAELGKTLLDRNTEL
                     EDSLQQMYTTNQEQLQEIEYLTKQVELLRQMNEQHAKVYEQLDVTARELEETNQKLVA
                     ESKASQQKILSLTETIECLQTNIDHLQSQVEELKSNQGRGRQKACDQERPAPSFSCLK
                     ELYDLRQHFVYDHVFAEKITSLQSQQSPDEEENEHLKKAVTMLQAQLSLERKKRVSVE
                     AEYKVVLKENSELEQQLSATDAYRARAQELEAEVAEMRQMLQAEHPFVNGVEKLVPDS
                     LFVPFKEPSQSLLEEMFLAAPEAHRKPLKRSSSETVLSSLAGDDIVKDHEDTCIRRAK
                     AVKQRGISLLHEVDTQYSALKVKYEELLRKCQQEQDSLSHKAVQTSRLLTRDLTGLVP
                     QSEAGASGWEPTPVSPEPISSPTTTPPEYKALFKEIFSCIKKTKQEIDEQRTKYPSLS
                     PYS"
     exon            155..267
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /inference="alignment:Splign:2.1.0"
     exon            268..416
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /inference="alignment:Splign:2.1.0"
     exon            417..578
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /inference="alignment:Splign:2.1.0"
     exon            579..2348
                     /gene="Cdr2"
                     /gene_synonym="RGD1310578"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcgggggag agcccggggc agcggccgaa acggcagggc ggcggcaaag cccgctgccc
       61 ccggacgtcc ccggcgacat gctggcagat aaccttgtgg aggagttcga gatagaggat
      121 gagccctggt atgaccaccg ggacctccag caagatctcc aacttgctgc agaactcgga
      181 aagacgctac tggatcggaa cacagagttg gaggattctc ttcagcagat gtacacaacc
      241 aatcaggagc agttacagga aattgagtac ctgaccaagc aggtggagct tctacggcaa
      301 atgaatgagc agcatgcaaa agtttatgag cagttagatg ttacagcaag agaactggaa
      361 gaaaccaacc agaagctagt tgctgagagc aaggcctcac agcagaaaat cctgagcttg
      421 acagaaacaa ttgaatgcct gcaaaccaac attgatcacc tccagagcca agtggaggag
      481 ctgaagtcta accaaggaag agggaggcag aaggcatgtg accaggagag accagcacca
      541 agcttctcct gtctgaaaga gctgtacgac ctccgccaac actttgtata tgaccacgtg
      601 tttgctgaga agatcacttc cttgcagagc cagcaaagcc ctgatgagga agaaaacgag
      661 cacctgaaaa aggcagtgac gatgttgcag gcccagctga gtctagagag gaagaagcga
      721 gtgagcgtgg aggcagagta taaagtggtg ctgaaggaga acagcgagct ggagcagcag
      781 ctgagtgcca cagatgccta ccgagcccgg gcacaggagt tggaggcaga ggtggccgag
      841 atgcggcaga tgctgcaggc agagcatcct tttgtgaatg gcgttgagaa gctggtaccc
      901 gactccctgt ttgttccttt caaggagccc agccagagtc tgctggagga aatgttcctg
      961 gctgctccag aagcacatag aaaaccactc aaacgcagca gcagtgagac ggtgctcagc
     1021 agcctggcgg gggatgacat cgtgaaggac catgaggaca cttgcatcag gagagcgaag
     1081 gctgtgaagc agaggggcat ctcccttctg catgaagtgg acactcagta cagcgccctg
     1141 aaagtgaagt atgaagagct cctgaggaag tgccagcagg agcaggactc actgtcacac
     1201 aaggctgtgc agacctccag actactgacg agggacctga cagggctggt cccgcagtct
     1261 gaggccgggg ccagtggctg ggaacccacc cctgtaagcc cagagcccat cagttccccc
     1321 accactacac ctccagaata caaagcacta tttaaggaga tatttagttg catcaagaaa
     1381 acaaagcagg aaatagatga acagagaaca aaatacccct ccctctcccc ttactcgtaa
     1441 tgagacctcc agttgtaacc gcctgttctc tctcacccaa tgccccttca gactcataag
     1501 cgcagtctcc agagcttgat gttgccgatg acacttgcct cgttgctttg cttagttggc
     1561 aaaagcagga aaagaggtga ctgataatgt tgagtccgag gtcctaggaa atctcgatag
     1621 actggcctct ggatggaaca ttgattaaac tgatttccag gagaagcccc aggactagca
     1681 gagggagatc catgtacttg ggagtaggct aaagtactta acagtgtagg gtaaagggca
     1741 ggattggaac aaaactaagg ctgctgctgt tgctttcata ttcagcttct caaactactt
     1801 ggaaccccaa gaactgccta actaaaatac ttctcacaaa cactgtcgtt cagaagagcg
     1861 ttgagaaagc aagacttatc tgaagtagat gacattaaca agctccttag gcccctgaag
     1921 ttttattgca tctgctagca cttgaatgat gactgacaga tcctaatgta gccaaattca
     1981 agttaatacc aattgaaatg gcaaattttg gtttaatcaa tgcctgtttg tatctgccca
     2041 gcattcagtt gttttactca aagctaggca tgtaatagta attctgtttt caggtggaaa
     2101 cagcagtctc ttgggtgtga tccgcactgg ccacttggca gccacgagct gctcctccct
     2161 agttcttaac cattccagac cttcagaatt cccgtctcct tcatacacag tattgatgtt
     2221 ctgactgtgg aaacaatctt cctctcactt gcacactttt aatttaaaaa tatttaagag
     2281 aaccgtggtt ctgatgtata tatttttcta aaggctaaat aaagctatct atgaatgtga
     2341 acaatggaaa aaaaaaaaaa aaaaaaaaaa aa
//
