LOCUS       XM_006249751            2959 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclin-dependent kinase 18 (Cdk18),
            transcript variant X1, mRNA.
ACCESSION   XM_006249751
VERSION     XM_006249751.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006249751.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006249751.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2959
                     /gene="Cdk18"
                     /gene_synonym="PCTAIRE3; Pctk3"
                     /note="cyclin-dependent kinase 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 24 ESTs, 26 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     141 samples with support for all annotated introns"
                     /db_xref="GeneID:289019"
                     /db_xref="RGD:1309523"
     CDS             333..1688
                     /gene="Cdk18"
                     /gene_synonym="PCTAIRE3; Pctk3"
                     /codon_start=1
                     /product="cyclin-dependent kinase 18 isoform X1"
                     /protein_id="XP_006249813.1"
                     /db_xref="GeneID:289019"
                     /db_xref="RGD:1309523"
                     /translation="MNKMKNFKRRLSLSVPRPETIEESLTEFTEQFNQLHTQRNEDGR
                     DEPGQLSPGVQYQQRQNQRRFSMEDLNKRLSLPMDIRLPQEFLQKLQLENPGLPKPLT
                     RMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA
                     PCTAIREVSLLKDLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMNMHN
                     VKIFMFQLLRGLAYCHRRKILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN
                     EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGKPLFPGSTVKEELHLIFRLL
                     GTPTEESWPGVTSISEFRAYNFPRYLPQPLLSHAPRLDTEGINLLTSLLLYESKSRMS
                     AEAALSHPYFQSLGERVHQLDDTASIFSLKEIQLQKDPGYRGLAFQHPGRGKSRRQSI
                     F"
ORIGIN      
        1 gggcttttgc cttcctcctc ctcctcctcc tcttacccac cttcctgcac ccctcccttc
       61 ttcctcctcc ctcagctcag attgcagctt tgggggggtg gaaaaccgct cacctttcta
      121 gaaccgagaa gagccagggt cccgagtagg gaccccggcg gggcgcgggg cgtggggcgc
      181 ggggcagggc acctaagcct ggcagcgcgg ccgcggaggg cgggagccgg ctcgccacga
      241 ccgggacacg cacagagtcc gcggcggcgg ccggagaggg gcagcgcgcc gggcaagctg
      301 agcaaaggac ccaccttgga cccctgctga tcatgaacaa gatgaagaac ttcaaacgaa
      361 ggctttccct gtcagtgccc cgcccagaga ccattgagga gtcattgacc gagttcaccg
      421 agcagttcaa ccagctccac actcagagga atgaggacgg cagggacgaa cctgggcagc
      481 tgtctccggg cgtgcagtat cagcaacggc agaaccagcg ccgattctcc atggaggacc
      541 tcaacaagag gctctctctg cccatggata tccgcctgcc ccaggaattc ctgcagaagc
      601 tacagctgga gaacccaggg ctgcccaaac cactcacccg aatgtcccgc cgtgcctccc
      661 tgtcagatat cggcttcggg aaactggaaa catacgtgaa actggacaaa ctgggggagg
      721 gcacctatgc caccgtcttc aagggacgca gcaagttgac agagaacctc gtggccctga
      781 aggagatccg gttggaacat gaggaagggg caccctgcac tgctattcga gaggtgtctc
      841 tgctgaagga cctgaaacat gccaatattg tgaccctgca tgacctcatt cacacagatc
      901 ggtccctcac cctggtgttt gagtacctgg acagtgacct gaaacagtac ctagaccact
      961 gcgggaacct catgaacatg cacaacgtca agatttttat gttccagctg ctccggggtc
     1021 tggcctattg ccaccgccgc aagatcctac accgggacct gaagccccag aacctgctca
     1081 tcaatgagag gggggaactg aaactggctg actttggcct ggcccgggcc aaatcagtgc
     1141 ctacaaagac ctactccaat gaggtggtga ccctctggta caggccccca gacgtgctgc
     1201 tgggatccac ggagtactcc acccccatcg acatgtgggg cgtgggctgc atcctctatg
     1261 agatggccac cggcaagccc ctcttcccag gctccactgt caaggaggag ttgcacctca
     1321 tcttccgtct cctggggaca cctacagaag agtcgtggcc aggtgtgaca tccatctccg
     1381 agtttcgagc ctacaacttc ccccggtacc taccgcaacc gctgctcagc cacgctccca
     1441 ggttggatac tgaaggcatc aacctcctga ccagcctcct cctgtatgaa tccaagagtc
     1501 gcatgtcagc agaggcggcc ctaagtcacc cctacttcca gtctctcggg gaacgagtac
     1561 accagctcga tgacactgcc tccatcttct ccctgaagga gatccagctc caaaaggacc
     1621 caggctatcg tggccttgcc ttccagcacc cagggcgagg gaagagccgg cgacagagca
     1681 tcttctgagc tacccacccg gctgcacgtt gagggacgag aggccactcg gaacatgaat
     1741 tcaggaagtg tggggcctgt gtggccatca gagggctgaa caatgaatgc ctgtggccag
     1801 tctggaggac cactcagcag ccctgttggt agcatttgct tccttccctt gcttgccaca
     1861 cagctctgcg gtggcctctg cctggacacc aatcccttgt cacccactgt gggatggggc
     1921 atgagctgct tccctgggag gaagtgaggg tcaaggaggg acccgggacc ctttcccagt
     1981 ggacgtgcag gagaaggtgg gggccctggc cctgctggct catcagcttg acaaaccccc
     2041 ttcttattgc ttggaccctt acttcatctt cttcccccca tgaggaggag gaatatggca
     2101 ccttacctgg gaccctggaa tcgcacccat gtgtgtgctg accccaccca aaggcagatg
     2161 tccccgaagc atcagaaaat gtagtgcctc cccttgtctc cacccccacc atgctgttgt
     2221 cccctccttg ccagaagccc tgtgccctct ggcttgcacc aaggctaaaa agcacaagct
     2281 tgcttcccgt gtccaactgc atccggaagt gtcccgtgct cctagatgta ctcctgccac
     2341 ctcagccagc cccgtgccca tcccccagtc tggaaagggt tgccttaaac tggcaggtgg
     2401 tcgagtgcgc tgtgtccttg gaactctgac ctatgtccct cttccctaag ccattcccgt
     2461 gggtgttatc atccctgagg gctgataagt caaccctgtc tcagggtcct gaggctggca
     2521 cccagatagg caaggtcacc ttgacactgg taccagagta accttggctc tttagggctg
     2581 gtgcagcctc tcccccatgc tccacctcct tcccagccct gtccacctga ccctggcacc
     2641 gacctccaca gagagggtgg ggagggcgtc ggcaccacag cctaagctgg agagaagtga
     2701 ggttgcagca ggtttgatcc tgacagcctc atcctacatc cccagggaag gcacccttcc
     2761 tctgtactcc cctcctgttc tagggtctcc ccaacatttg gctgaacttg aagggcaaag
     2821 gtcaaaggga ggtcaagctc catgccatcc taaccccttg gagcctgggt tctccctaac
     2881 cccctttccc actgactgtg aatgtcgtga ctcagagcaa agacagagaa tatatttaat
     2941 tcatgttgta caaaaagaa
//
