LOCUS       NM_001108082            3670 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus cyclin-dependent kinase 17 (Cdk17), mRNA.
ACCESSION   NM_001108082 XM_001055332 XM_001077276 XM_001077300 XM_235049
VERSION     NM_001108082.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Hirose,T., Kawabuchi,M., Tamaru,T., Okumura,N., Nagai,K. and
            Okada,M.
  TITLE     Identification of tudor repeat associator with PCTAIRE 2 (Trap). A
            novel protein that interacts with the N-terminal domain of PCTAIRE
            2 in rat brain
  JOURNAL   Eur J Biochem 267 (7), 2113-2121 (2000)
   PUBMED   10727952
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Hirose,T., Tamaru,T., Okumura,N., Nagai,K. and Okada,M.
  TITLE     PCTAIRE 2, a Cdc2-related serine/threonine kinase, is predominantly
            expressed in terminally differentiated neurons
  JOURNAL   Eur J Biochem 249 (2), 481-488 (1997)
   PUBMED   9370357
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jan 26, 2008 this sequence version replaced NM_001108082.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643288.29494.1,
                                           SRR26643295.27746.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-336               JAXUCZ010000007.1  29570982-29571317
            337-483             JAXUCZ010000007.1  29618389-29618535
            484-648             JAXUCZ010000007.1  29621978-29622142
            649-782             JAXUCZ010000007.1  29626558-29626691
            783-908             JAXUCZ010000007.1  29627795-29627920
            909-965             JAXUCZ010000007.1  29631556-29631612
            966-1080            JAXUCZ010000007.1  29632371-29632485
            1081-1175           JAXUCZ010000007.1  29633360-29633454
            1176-1238           JAXUCZ010000007.1  29633876-29633938
            1239-1362           JAXUCZ010000007.1  29635838-29635961
            1363-1483           JAXUCZ010000007.1  29640550-29640670
            1484-1581           JAXUCZ010000007.1  29643212-29643309
            1582-1687           JAXUCZ010000007.1  29643789-29643894
            1688-1730           JAXUCZ010000007.1  29644768-29644810
            1731-1821           JAXUCZ010000007.1  29645637-29645727
            1822-1899           JAXUCZ010000007.1  29646704-29646781
            1900-3670           JAXUCZ010000007.1  29647326-29649096
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..3670
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /note="cyclin-dependent kinase 17"
                     /db_xref="GeneID:314743"
                     /db_xref="RGD:1565593"
     exon            1..336
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            337..483
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     CDS             366..1937
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /EC_number="2.7.11.22"
                     /note="serine/threonine-protein kinase PCTAIRE-2; cell
                     division protein kinase 17; PCTAIRE-motif protein kinase
                     2; PCTAIRE protein kinase 2"
                     /codon_start=1
                     /product="cyclin-dependent kinase 17"
                     /protein_id="NP_001101552.2"
                     /db_xref="GeneID:314743"
                     /db_xref="RGD:1565593"
                     /translation="MKKFKRRLSLTLRGSQTIDESLSELAEQMTIEESSSKDNEPIVK
                     NGRPPTSHSMHSFLHQYTGSFKKPPLRRPHSVIGGSLGSFMAMPRNGSRLDIVHENLK
                     MGSDGESDQASGTSSDEVQSPTGVCLRNRIHRRISMEDLNKRLSLPADIRIPDGYLEK
                     LQISSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLV
                     ALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQ
                     YMDDCGSIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGL
                     ARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS
                     TVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPRLDSEGIELI
                     TKFLQYESKKRAPAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSY
                     PETGHGKNRRQSMLF"
     exon            484..648
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            649..782
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            783..908
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            909..965
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            966..1080
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1081..1175
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1176..1238
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1239..1362
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1483
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1484..1581
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1582..1687
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1688..1730
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1731..1821
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1822..1899
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
     exon            1900..3670
                     /gene="Cdk17"
                     /gene_synonym="Pctaire2; Pctk2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaaagcaa cgcgcacgca gacgaacgag agcggcagct gcggtctccc cagcgcccgg
       61 cggtccagca gcccgcgccc cgccgcctcg ctcctccccg gctccgctgc ccggagtact
      121 gggccgtccg cgaggctccg cggcccggga gccatgttga gcggggggct cggccacgcg
      181 tgaggcggcc ggcggccctc gcggagcgga aggcgcgaga gggggaggcc tgagcctgag
      241 gcgcctcggc gcgtccgccg ccaccggacc tgcatccgct cgttctgcgc gcccgcccgc
      301 ccgtccgccc ggagcccgcg atctccgcac ttgctgaatt tttcaagcca tatccagctg
      361 ataggatgaa aaagtttaag aggagactgt ccctcacgct caggggaagc cagactattg
      421 atgagtccct gtcggagctg gctgaacaga tgaccataga ggagagcagt agcaaagaca
      481 acgagcccat tgtgaagaat ggcaggccgc caacgtctca cagcatgcat tccttcctcc
      541 atcagtacac agggtccttc aagaagcccc cactgcgaag accccacagc gttattggag
      601 gaagccttgg ttcctttatg gcaatgccca gaaatggaag cagattagat attgttcatg
      661 aaaatctgaa aatgggatca gatggtgaga gtgaccaagc ttctgggaca tcatctgatg
      721 aagtccagtc ccctacaggt gtttgcctca gaaatcgtat acatagacgg atctcgatgg
      781 aggacttgaa taagcggctg tcgctgcctg cagacatcag gatacccgat ggctacctgg
      841 agaagctgca gatcagcagc ccgcccttcg accagcccat gagccgcagg tcccgcagag
      901 cctccttatc agaaattggg tttgggaaaa tggaaaccta catcaaattg gaaaagcttg
      961 gagagggcac atatgcaacg gtatataaag ggagaagtaa gttgacagag aacttggtgg
     1021 cattaaaaga gatccgcttg gaacacgaag aaggtgcacc ctgtacagct ataagagaag
     1081 tttcactgtt aaaggactta aaacatgcaa atatagtaac gttgcatgac atcgttcaca
     1141 cggacaagtc tttgactctg gtctttgagt acctggacaa agacctgaag cagtacatgg
     1201 acgactgtgg gagcatcatg agcatgcaca acgtcaagct gttcctgtac cagattctcc
     1261 gtggtttggc atattgccat agaagaaaag tgttgcaccg ggacctgaaa ccacagaacc
     1321 tcctcattaa tgaaagagga gaactaaagc tggctgactt tggactagcc agagccaagt
     1381 cagtccccac caagacctac tcaaatgaag ttgtcacgct gtggtatcgg ccccctgacg
     1441 tgcttcttgg ttcctcggag tactcaactc agatcgacat gtggggagtt ggctgcattt
     1501 tctttgaaat ggcttctgga agaccactgt ttccagggtc aactgtggaa gatgaactgc
     1561 acttaatatt tcgactacta ggaactccat ctcaggaaac ttggccaggt gtttcttcaa
     1621 atgatgaatt caagaactac aacttcccaa aatataagcc acaacctcta attaatcatg
     1681 cacccaggtt agattctgaa ggaattgagt tgataacaaa gtttcttcag tatgaatcta
     1741 agaaaagggc tccagcagaa gaggccatga aacatgtgta cttccgaagt ctagggccga
     1801 gaatacatgc tttaccagaa agcgtatcaa tattcagttt gaaagagatt cagttgcaaa
     1861 aggacccggg ttttcgaaat tcttcctatc cagagacagg acatgggaag aacagaagac
     1921 agagcatgct cttttaagtc tggtagcttg gtctcaagcc cagccccagc ctttcttacc
     1981 agccatggac tcagagctga aggcagtcat ttcttgtgct ggacttggga tctccgtgtg
     2041 tctgcactgt cctcttccca gtggagtctt tttatttcag acctacagat tgtttttata
     2101 tttcttgtca cagtgtgaca attttttttt ttttttttgt acagttggtt ttaaggtctt
     2161 ctctgcctgt agagccagga ggttacagct ctcaatgtaa ctgtggctgc agatttgtgc
     2221 aggactgaga aacacagtgc attatttatt gtggaatcat tgctgctaaa taactactgt
     2281 ctgtttattt aacacaacag ttgaatgcct gaagaagttg cagtggcttt attagatgtg
     2341 aacgcatctg tttctcctca caaattgttt gactgctgca tttcgttgtt gttttgtttt
     2401 gtttgtttgt ttgtttttaa aaaaaattaa actgcagtgt ttcctggaat gtatatttag
     2461 ctttgcttag cagtaaaata agtgagccat cgtgaacact cgaagttcgt gctacttata
     2521 atttcttagg agcattggcc aatagagtag ctgagagagg gacagcaccg tgtgtttggg
     2581 aagcgtgtaa tgtgaggggc tgagccaagc aaatgaatag cagccatttt gggttcccac
     2641 atcagacacc aatcaactaa gaacaccaag ttatccattt ttacctattc ctcacctgag
     2701 agatgtctac tgcctcttcg tatgcctaca cttgattaac ttttacactg tgctttcagt
     2761 taacatttaa ccgtagaggt cattcaaaca ggaaaagcct tgctgctgtt tgtctgaagc
     2821 acgtttcttt tcctagatac tacttcattt tgaggaacag tttctttcac ttgggggctg
     2881 tgtatgtttc aaataacgtt cacttggaat aaccagctga aagctggact ctgtctttaa
     2941 atggagccat gatgaattag aaatgagaaa taagagccca gaggactgcc ttagcattgt
     3001 gggtattatc tgctcatcag agacactaac agtgtaactt gaattatgca tgtccttgac
     3061 catcacagac actcggtgtt ggtaaccgtg tcttaggcat tcgtgttcat cgttaaggac
     3121 tattggttag tgcatcttac aactagaaat cttaattggt atactttgaa atggtcatgt
     3181 aagtttttgc cttatatcat gaaaatagtt ataacttaat ttttgtcctg ccattcactg
     3241 taaaacattc agggtcctct catttctgtt caggaaatcc tgtagtttat tgtttgttat
     3301 ttaacagtat taaagtgagt ttttgtatat tttcatttta actttatttg tgaatagtga
     3361 ttgtggcatg tttggggatg ttattttaat atttcacaat actgaaattt taattttttt
     3421 ttttaaaaaa agaaagttct ggaagaaaca gattcatgtg taacagtgaa tattggacca
     3481 ctgctgcttt tcacgattgt cagctggttt tatgttaagc cccgtagcct aactgctgtt
     3541 atttctaact gacagacatg tattaatatt gtactttgaa ggttataaat attatgtgaa
     3601 aattccttcc ttcgttttga aatttataat aactaaatct ctgtgttata taaaatgtga
     3661 tctttgtgga
//
