LOCUS       XM_039084845            3499 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclin-dependent kinase 15 (Cdk15),
            transcript variant X1, mRNA.
ACCESSION   XM_039084845
VERSION     XM_039084845.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084845.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3499
                     /gene="Cdk15"
                     /note="cyclin-dependent kinase 15; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     12 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:301440"
                     /db_xref="RGD:1306205"
     CDS             929..2242
                     /gene="Cdk15"
                     /codon_start=1
                     /product="cyclin-dependent kinase 15 isoform X1"
                     /protein_id="XP_038940773.1"
                     /db_xref="GeneID:301440"
                     /db_xref="RGD:1306205"
                     /translation="MGQELCAKSRQPGCSCYHRSEGGEAHSCQRSQPGSTSEPAVFEL
                     TDLKEASCSSASFHPRGLQAARVQKLESKRPRSNSDSFQEENLRQGVPWKKSFPFGAA
                     SSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMNAEEGVPFTAIREASLLKGLKH
                     ANIVLLHDIVHTKETLTFVFEYMHTDLAQYMSQHPGGLHPHNVRLFMFQLLRGLAYIH
                     HQRVLHRDLKPQNLLLSHLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDALLGA
                     TEYSSELDIWGAGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTEDTWPGVSKLP
                     NYNPEWFPPPEPQSLQTVWNRLGGVPEAEDLASQMLKGFPRDRVSAQEALVHDYFSVL
                     PSQLYQLPDEESLFAVSGVELKPEMCDLSASYRKGHLLAGVNKCW"
ORIGIN      
        1 ctggtgtgtc ttaagataac tacagtgtat ccatataaat attaaataaa atcttaaatt
       61 aaaaagaagt aatgtcatat atatatatat atatacacat atatatttaa atgtgccacc
      121 atacccagct caaactcctc tctccaccgt tgactctgca ctgttagtag agttttatca
      181 acacaggcat ttattatata gtgtttgaag gaatgactgc cctgtcagac tgagatggac
      241 ttctgtttgg aggcagaggg aggaatcctc agctcccttt ccaccccacc gttctctggt
      301 tcctttgact ctaaaagttg gctaggtggc acactcgttt gaatgttgga aaaccaatct
      361 gagtcagatg gcacacatct gcaatcccgg actggggaaa ctgaggcagg aggattacct
      421 ccacttggag gctagctggg ctagtcttgt gagagacaag gactcaaaag aaaaaagttt
      481 gaaaactaag aggctttcag gaaagcaagg gataagacac ccctcggcat gaccacttta
      541 gcgaggggaa acccaataga cactagtcga attctggaaa agtgagtgta gccacagaac
      601 tgactggtgg ctggggtaag ctggtgtacc cagttgtatt ctctcggtaa gagcctcctg
      661 gtgcacccag ttgtattctc tcggtaagag cctccttgtt ttcgggtgtg cacacatgag
      721 cgccagccgc tgcggttctg atgcatagtt ctttgcactg atgagctaaa actgctgaag
      781 tcatgaggct gctccaggca gagccctcgt gtgagtcaca cgaaagctcc actctgctga
      841 cctctggcag agcggggagc gaatgaggag agaagagacg gatgggaaga ggttcaagtg
      901 ccggttttct ccttgaacct ggactagtat gggtcaagag ctgtgtgcaa agagccggca
      961 gccaggatgc agttgctacc accgttcgga gggaggcgag gcgcacagct gtcagaggag
     1021 ccagcctgga agcacctcgg agcctgctgt atttgagcta acagacctaa aagaagcatc
     1081 atgttcctcg gcttcatttc accccagggg actccaggct gccagagtcc agaagttgga
     1141 gagtaaaagg ccacggagta acagtgattc ttttcaggaa gagaatctga ggcagggggt
     1201 gccatggaag aagagcttcc cttttggggc agcctcatct tacttgaact tggagaagct
     1261 gggtgaaggt tcttatgcca cagtttacaa gggcatcagc aggataaatg gacaactggt
     1321 agctctaaaa gtcatcagca tgaacgcaga ggagggagtc cctttcacag ccatccggga
     1381 agcgtctctc ctgaagggct tgaagcacgc caatattgtc ctcttgcatg acattgttca
     1441 caccaaagag actctgacat tcgtgtttga atacatgcat acggacctgg cccagtacat
     1501 gtctcagcat cccggagggc ttcatcctca caatgtcagg cttttcatgt ttcaacttct
     1561 gcggggcctg gcatacatcc accaccagcg tgttctccac agggacctga aacctcagaa
     1621 cttgctcctc agtcacctgg gagagctcaa actggctgat tttggtcttg ctcgagccaa
     1681 gtccattccc agccagacat actcttcaga agtggtgaca ctctggtacc ggccacctga
     1741 cgctttgctg ggagccaccg agtactcctc tgagctagac atatggggcg caggctgcat
     1801 ctttatcgaa atgttccagg gccaacctct gtttcctggg gtatccaaca tccttgaaca
     1861 actggagaag atctgggagg tactgggagt ccctacggag gacacctggc ctggggtctc
     1921 caagctgcct aactacaatc cagaatggtt cccgccacct gaaccccaga gcctgcagac
     1981 tgtctggaac aggctgggtg gggttcctga agctgaagac ttggcctccc agatgctaaa
     2041 aggcttcccc agggaccgtg tctcagccca agaagcactc gttcatgatt atttcagtgt
     2101 cctgccatcc cagctgtacc agcttcctga tgaggagtct ctctttgcag tttccggagt
     2161 ggagctaaag ccagaaatgt gtgacctttc tgcctcctac aggaagggac acctcctagc
     2221 cggggttaac aaatgttggt gaaaagaaaa ggtgaggtca tctacgtctt tgcagacctg
     2281 tagccatttg gtttcctgtg tctgcttact aagaagcttc gtgccctcat tcatactgga
     2341 tcagagatct gtgttctctc tcgctgcctg gaatgtttaa aaatgttgaa ggcaacggta
     2401 caacacacaa agagagtgca atggaaggtt attgctgtta ttgttgcctt aaagaaagaa
     2461 aagacataaa ctgaggtgac gtgaaaagag ctagctcttc agaacagttt caaccatttt
     2521 gatgagtccc tgggcccaaa actctatttc tttatgggac agactgggag acagacaact
     2581 gggaagttct agagccggag ctggtaattg ctgaggtctg ccatgcttgt attcccttac
     2641 agtccagccc acccccaccc ccgccccaac tgaaagactt ctgtggcgtg gaggggatta
     2701 gtctggctta gggaggtctg taggaacgtg gtcccttgga taaagttgtc aacaaatgga
     2761 cttgcttggg actatttgtg atgattccag ggttcactct tcctcctcca gtggctatca
     2821 cagtgtttac tgcttaagta cacccagatt tcgggagttc aaactgggct gccggctaga
     2881 gttgagtttc agctctcacc tgctaccgag tcctaattgt cttcagagat ggcaaaagcg
     2941 acaaggaacc taagctccca ctgatgatgg agatactgga gctccagaga tgcaattcaa
     3001 tcgtggggca ccaccaggca catgtgcaca cagagacccc tcagcaggag atccgcccgg
     3061 ctgatacact cgtccactaa aggaagcttg ggaaactcaa attacttcat caagggatca
     3121 tctcaggcaa tatagtagcc tagaaaccag agaccactat gtatccttta ggaggacgaa
     3181 ccaattaaga gagaatttaa aaatggtaac tatccaccca gtgtctgaga tgaaagaagg
     3241 ggggaaaaat gcatgcagat aatcctccag aaagccgtct ttgtgtatat gagcaagcca
     3301 ttggacaaaa cctgcccact gcacctgcaa ggtgaagtgt gtgggctggg tgggggctga
     3361 cagggtgtgt gtgtgcgcag agaacagatc gtattcaacc tagcaagatg ccagtgcgga
     3421 tatggtgtgg gattcagacc tgttccggtc aaggattttc agtgactact tgaataaatc
     3481 agagaaaatg catacctta
//
