LOCUS       NM_001399491            2928 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus CDAN1 interacting nuclease 1 (Cdin1), transcript
            variant 1, mRNA.
ACCESSION   NM_001399491
VERSION     NM_001399491.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Russo,R., Marra,R., Andolfo,I., De Rosa,G., Rosato,B.E., Manna,F.,
            Gambale,A., Raia,M., Unal,S., Barella,S. and Iolascon,A.
  TITLE     Characterization of Two Cases of Congenital Dyserythropoietic
            Anemia Type I Shed Light on the Uncharacterized C15orf41 Protein
  JOURNAL   Front Physiol 10, 621 (2019)
   PUBMED   31191338
  REMARK    Erratum:[Front Physiol. 2020 Aug 11;11:940. PMID: 32848870]
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMN06621351 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-307               JAXUCZ010000003.1  122895824-122896130
            308-353             JAXUCZ010000003.1  122942718-122942763
            354-418             JAXUCZ010000003.1  122943648-122943712
            419-479             JAXUCZ010000003.1  122951653-122951713
            480-552             JAXUCZ010000003.1  122955306-122955378
            553-632             JAXUCZ010000003.1  122981873-122981952
            633-682             JAXUCZ010000003.1  122982303-122982352
            683-750             JAXUCZ010000003.1  122986849-122986916
            751-816             JAXUCZ010000003.1  122998537-122998602
            817-940             JAXUCZ010000003.1  122999143-122999266
            941-2928            JAXUCZ010000003.1  123099112-123101099
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2928
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /note="CDAN1 interacting nuclease 1"
                     /db_xref="GeneID:499864"
                     /db_xref="RGD:1563680"
     exon            1..307
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..1070
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /note="isoform 1 is encoded by transcript variant 1;
                     uncharacterized protein C15orf41 homolog"
                     /codon_start=1
                     /product="CDAN1-interacting nuclease 1 isoform 1"
                     /protein_id="NP_001386420.1"
                     /db_xref="GeneID:499864"
                     /db_xref="RGD:1563680"
                     /translation="MILTKAQYEEIAQCLVSVPPTRQSLRKLKQRFPSQSQATLLSIF
                     SQEYQKHIKRTHAKHHTPEAIESYYQRYLSGVGKNGAAPVLLELANEVDYAPSLMARI
                     ILERFLQGHEQTPPSKSVINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHA
                     IGYEHEVLLRDLLLKKNLSFLDEDQLRAKGYDKTPDFILQVPVVMLCPLAVEGHIIHW
                     IESKASFGDECSHHAYLHGQFWSYWNRFGPGLVIYWYGFIQELDCNRERGILLKASFP
                     TDIVTLCHSTA"
     exon            308..353
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            354..418
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            419..479
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            480..552
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            553..632
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            633..682
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            683..750
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            751..816
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            817..940
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
     exon            941..2928
                     /gene="Cdin1"
                     /gene_synonym="RGD1563680"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttctacag cccgcctctc ccacagaggt gaagcctggg acgcggcttg tctccgcccc
       61 gcggtgcagc tagaggggtg tgctttgggg gcttagggaa tagctaagga agaggagggc
      121 ccggggtcgt gccgcagtct gcccttccct agcttctagg cactaagcct gcacgagccc
      181 aaaggtgatt tttccttggg cccaatatga tactaaccaa agcccagtac gaggagatag
      241 cccagtgcct agtgtctgta ccgcccacta ggcagagcct gaggaagctg aagcagaggt
      301 tccccagtca atcgcaggcc actctgctga gcatcttctc ccaggagtac cagaaacata
      361 ttaagagaac acatgccaaa catcacactc cagaagcgat tgaaagttat taccagaggt
      421 acctgagtgg tgtggggaaa aacggagcag cccctgtgct cttggagctg gccaatgagg
      481 tggactatgc accctcatta atggctcgga ttatcctgga gagatttcta caggggcacg
      541 aacagactcc accctccaag tctgttataa acagtatgct acgggaccct tctcagattc
      601 cagacggagt tctagcaaac caggtctatc agtgcatcgt gaacgactgc tgttatggac
      661 cgctggtgga ctgcatcaag catgctattg gctacgagca tgaagtcctg ctgagagact
      721 tgcttctcaa gaagaacctc tccttcctag acgaagatca gctgcgtgca aagggctacg
      781 acaaaacacc agacttcatc ttacaggtgc cagttgtaat gctttgtccc ttagctgtgg
      841 aaggacacat aattcactgg attgaaagca aagcctcatt tggtgatgaa tgtagccacc
      901 acgcctacct gcatggccaa ttctggagct actggaatag gttcggacca ggcttggtca
      961 tctattggta tggatttatc caggaactgg actgcaaccg ggaaaggggc atcctgctca
     1021 aagcctcttt cccaacagac attgtcacct tatgccacag cacagcttga ccccgaaggt
     1081 cccggaagag aagccggaag caatgttact ttcctgcagt ataaactgct ggcaacatct
     1141 gccctgaact tcagctgaac cctgctgctg ccgtcgcagc cctacctctc tacacaaaca
     1201 tatcaagagt ttctgttttc cttcatccct gggcgatgtg aatagccaag aactacagac
     1261 acaacccact cattatcagc atttctgtct ctaacaaaca gttagtttat agatagtcat
     1321 aatcttgctt ccttccgaat gctttctcct tgtatactga acagaagaga aagtatggag
     1381 actgagaggt atgatttttc agttctcctc cctatgatca aatatatttt cttctaaacc
     1441 tccattcata ttctctctct ctctctctct ctctctctct ctctctctct ctctctctcc
     1501 ccctctccct ctccctctct ctctccctct ccttctccct ctcccttctt ctctccttct
     1561 ctttcttctg tcccccagtc tctgcaaggg tacactggta ctgtgtgttg cattaccacc
     1621 ggggaaaaac ctagcacaaa cctagagaag ctggagacag gaagtccata agtaagtgtt
     1681 ccttctcacc tggggctcag cagagccgga ctggagcctt ttctatggag tctcgtggcc
     1741 tcctgacttc tgtggcattc agccaaggtg caaaaatccc ccttgatgag aatttcctct
     1801 tttcataaag ttgatttgaa caccaaacac ttcacgttga cctcaccttc aagtatgagt
     1861 tgcagttgtg tctggaaaac cttgctcctt tggcttgggg ctgaggcagt ggactgaacc
     1921 ccaggctcct ctctacagtg gccgtctaaa ccggactgca gccagcacag tgttagcagc
     1981 tatttttatg agattttttt aaagtacatt catacatact gctttaagtc tgcattttat
     2041 actacataat tgtataatac tcaaatgatt tagacattat aaacagtcag ctttgaatga
     2101 attcagtgta ccagaaaaat cctcatgtga tttttaaata agcaatataa aagagatttt
     2161 gtatttattc actttaattt cttcactttt atatactgta gaccaggctt cagtgagaag
     2221 caaaacatca ataaaataat tataaaccta tcttttggga aattaaaaac taatctgtat
     2281 ctccccaaaa aaatgtattt tgtaaaaaaa aaaaaaaaat gccctcatgc ttgtaaaaat
     2341 gtagctttta taatgttgaa gagttttaga aataaaatta tgactcttgg aaacaaatac
     2401 cttaactcat acacattggt cagttccttt tgtacctggt tagtgaaaag cttggtctgt
     2461 taccttcctc ccaagggtca caagtgtggc aggtccaaga caggatttta agccttctct
     2521 gagtgctggc gagagatttc aacatttaag agtatggtgc ttttgcagag ggtccaggaa
     2581 atcttaggaa agaaggtaga gttacgggta aggtggagtc aggcagactc ctgtttccac
     2641 ctagagtgca gcatgcaggt ttggtgcatg aaatagagag acgatttgag acccactaca
     2701 tggactttat acacagttta aagaaaaata ttaaaatctg gtttcatggc atgccctaag
     2761 ctagcagttt ggtttgtttt ggtttgggtt tgaggagtta gaaggggtgc agtaaattac
     2821 atgtatctgc acagatgttg aaaatctttc taaacccttg tcaaagattt gcttgtctta
     2881 acattagcct aatttatgat gaccattcac taataaattg taaacgcc
//
