LOCUS       NM_001048044            1926 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus CDC42 effector protein 3 (Cdc42ep3), mRNA.
ACCESSION   NM_001048044 XM_001063467 XM_233815
VERSION     NM_001048044.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC105615.1 and CB586390.1.
            
            On or before Dec 12, 2007 this sequence version replaced
            XM_001063467.1, XM_233815.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105615.1, CB799555.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1649              BC105615.1         1-1649
            1650-1926           CB586390.1         16-292              c
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..1926
                     /gene="Cdc42ep3"
                     /note="CDC42 effector protein 3"
                     /db_xref="GeneID:313838"
                     /db_xref="RGD:1305858"
     exon            1..223
                     /gene="Cdc42ep3"
                     /inference="alignment:Splign:2.1.0"
     exon            224..1904
                     /gene="Cdc42ep3"
                     /inference="alignment:Splign:2.1.0"
     CDS             437..1201
                     /gene="Cdc42ep3"
                     /note="CDC42 effector protein (Rho GTPase binding) 3"
                     /codon_start=1
                     /product="cdc42 effector protein 3"
                     /protein_id="NP_001041509.1"
                     /db_xref="GeneID:313838"
                     /db_xref="RGD:1305858"
                     /translation="MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHI
                     GKEGQHDVFGDISFLQGNYELLPGNQEKAHSGQFPGHNDFFRANSTSDSMFTETPSPV
                     LKNAISLPTIGGSQALMLPLLSPVTFNSKQESFGRPKLPRLSCEPVMEEKVEEKGSLL
                     ENGTVHQGDTSWGSSGSASQSSQGRDSHSSSLSEQYSDWPADDMFEHPASCELGKSKT
                     KSEESLSDLTGSLLSLQLDLGPSLLDEVLNVMDKNK"
ORIGIN      
        1 caactgccgc tgggagcaca gcagcgggac gctcgctggc aacccagttt cgcagctcct
       61 acctccggga gacgctgcgc acagtccggg agcagattgg gcggtgaacc gtcgccgccc
      121 ctcgggttct gcgagcacta gcgaggattg tgtgcgccct cgggaggcga cccgggccga
      181 cgcccggtcc ccgggcagaa gcaaggagcc ttggagacag ctggtttctc cttgccgtag
      241 aagggactgg acaatgtaac gggctctccg gaaagatctc tgttgagcta gatctctcag
      301 accctgtctc ctagatcaac ctgagaagaa atgatgtgac aattcttatc aaagaggact
      361 ttttggaagt gtgggataac cgtgaagaag gtcacccttt tcccggtctg tgaaatagac
      421 attctcagat tccaaaatgc cagccaagac cccaatttac ctgaaagcgg ctaacaacaa
      481 gaagggaaag aaatttaaac tgagggacat tctgtcccct gatatgatca gtcctccttt
      541 gggggacttt cgtcacacta ttcacatcgg caaagagggc cagcatgacg tctttggaga
      601 catttccttt cttcaaggga actatgagct cttgcctgga aaccaagaga aagcacactc
      661 cggccagttc ccggggcaca acgacttctt ccgggccaat agcacctcgg actcgatgtt
      721 cacggaaaca ccctccccgg tgctcaaaaa tgccatctcc ctcccgacta ttggaggatc
      781 ccaggctctc atgctgccct tattatcacc agtgacattt aattccaagc aggagtcctt
      841 tgggcgtcct aagttgccaa gactcagctg tgagcctgtc atggaagaga aagttgagga
      901 gaaaggtagt ctgttagaga acgggacagt ccaccaggga gacacctcgt ggggctccag
      961 tggttccgcg tctcagtcca gccagggcag ggacagccac tcctccagcc tgtctgaaca
     1021 gtactccgac tggcccgcgg acgacatgtt tgagcatcct gcctcctgcg agctggggaa
     1081 gtcaaagact aaatcagaag aatccctttc cgacctgacc ggctccctgc tctccctgca
     1141 gttggatctg gggccctcac ttttggatga agtcctgaat gtcatggata aaaataagta
     1201 accaggagtc agcccttttt cttgggagta agaggtacca aaataagcag aaaacaaaaa
     1261 atcatctaac cacagccgaa gaaaagagct gctctgactg tttttatttg cagccatgtg
     1321 gtgcattttt ctaaaataac actcctgttc gtacaaaata tttttttaac catcatgccc
     1381 tgtttgcaaa aattttgaaa acaacaattt ttaaaaattg aagaaaaaaa aaaaacctgt
     1441 tctggcagaa aaaaggaaat gaggaagtga gtcagagctc atttaagcag gcattgtcgg
     1501 tgctcaaaca cacttggttt tgtttgtttg tagatgtgca cacatccagg ctgtctagta
     1561 gggctgggtc cgtggtctct ccaaggcgat ttacagcatg ttggaagaag gaaatcaaaa
     1621 cttacttcgc acctacgcct tttttttttc cttgactctt ttgtatattg tatcttttgg
     1681 gttcaccata gcaagttctc cagtgttaag attttactct tttcatattt gaacaacctt
     1741 acgggacttg ggattttttt ttccttgtgg ttcttatata tctctgtata ctatttccgt
     1801 gttgcaaaag tttgactgtc agctacatgt tggttaaaaa caagcaaggt attactgtaa
     1861 ctaagttatt tttaaagttg aaatatattt ttatgcgcct ttggaaaaaa aaaaaaaaaa
     1921 aaaaaa
//
