LOCUS       NM_001079700            2263 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus CDC42 effector protein 1 (Cdc42ep1), mRNA.
ACCESSION   NM_001079700 XM_001076184 XM_235488
VERSION     NM_001079700.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   3  (bases 1 to 2263)
  AUTHORS   Hirsch,D.S., Pirone,D.M. and Burbelo,P.D.
  TITLE     A new family of Cdc42 effector proteins, CEPs, function in
            fibroblast and epithelial cell shape changes
  JOURNAL   J Biol Chem 276 (2), 875-883 (2001)
   PUBMED   11035016
REFERENCE   4  (bases 1 to 2263)
  AUTHORS   Joberty,G., Perlungher,R.R. and Macara,I.G.
  TITLE     The Borgs, a new family of Cdc42 and TC10 GTPase-interacting
            proteins
  JOURNAL   Mol Cell Biol 19 (10), 6585-6597 (1999)
   PUBMED   10490598
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC128744.1.
            
            On or before Dec 10, 2006 this sequence version replaced
            XM_235488.4, XM_001076184.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128744.1, EX491595.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132266, SAMD00132295
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2263
                     /gene="Cdc42ep1"
                     /note="CDC42 effector protein 1"
                     /db_xref="GeneID:315121"
                     /db_xref="RGD:1311131"
     exon            1..565
                     /gene="Cdc42ep1"
                     /inference="alignment:Splign:2.1.0"
     CDS             103..1269
                     /gene="Cdc42ep1"
                     /note="binder of Rho GTPases 5; CDC42 effector protein
                     (Rho GTPase binding) 1"
                     /codon_start=1
                     /product="cdc42 effector protein 1"
                     /protein_id="NP_001073168.1"
                     /db_xref="GeneID:315121"
                     /db_xref="RGD:1311131"
                     /translation="MPGPQGGTGAPSMSLGKLSPVGWVPSSHGKRRLTADMISPPLGD
                     FRHTMHVGRGGDVFGDTSFLSNHGGRSGNTHRSPRSFLARKLQQVRRVGVPPRRMASP
                     AATSPAPPPISPIIKNAISLPQLNQATYDSLVVSKLSFDSTPASSTDGRSGYGLESGF
                     CTISRLPRVEKHSSRDRDHDRDPDHSQDREQSSSPSEPNPNPELRRSDSLLSFRFDLD
                     LGPSLLSELLGVMSLSEAPAANPPAPAANPAPTAKPPADAVTTLDTVTSLPAPTASSP
                     SSGRFPNGVTAVLGPVAEVKASPVGEGPQVPSKMAFDRRGASWGAIRASRHYTEMDAR
                     RELAGVLPQVHGSWESLNEEWSAPPASSRAPVPSTVQANAFEFADADEDDEVKV"
     exon            566..2236
                     /gene="Cdc42ep1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcttcatcga gaggaagggg ctaaaaggat ccctgaaccc aggctgccat cttccctggc
       61 cccaaggtgg catggactag cagttgtaag caaccaaagc tgatgcccgg cccccaaggg
      121 ggcacaggag cccccagcat gagcctgggt aagctgtctc ctgtgggctg ggtgcccagt
      181 tctcatggaa agaggcgcct gacagcagac atgatcagtc ccccgctcgg ggacttccgc
      241 cacaccatgc acgtgggccg tggcggggac gtcttcggtg atacctcctt cctcagcaac
      301 cacggaggcc gctctggaaa cacccaccgc tcgccccgaa gttttctggc caggaagctc
      361 cagcaggtac gcagagtcgg cgtgccccct cgaaggatgg cttccccggc tgcaacgtca
      421 cccgccccgc ctcccatctc tcccatcatc aagaatgcca tctccctgcc ccagctcaac
      481 caggccacct atgacagcct ggtggtgagc aagctgagct ttgatagcac tccggctagc
      541 tccacggatg gccgctccgg ttacggcctg gagtctgggt tctgcaccat ctcacgcctt
      601 ccacgagtgg aaaaacacag cagccgtgac cgtgaccatg accgtgaccc ggaccattct
      661 caagaccgag agcaaagttc ttccccctct gagcctaacc ctaaccctga gcttcgacgc
      721 tctgactctc tcttgtcctt ccgttttgac cttgaccttg ggccctcact cctcagtgag
      781 ctgctaggag tcatgagcct ttcagaagcc cctgctgcca acccccctgc tcctgctgcc
      841 aaccctgccc ctactgcaaa acccccagcc gatgcagtaa ccactctaga cactgtgaca
      901 agccttccag cccccacggc aagctcccca tccagtggac gtttccccaa tggggtaact
      961 gccgtgttgg gccccgtggc tgaggtaaag gccagtcctg tgggagaggg tccccaggta
     1021 ccctccaaaa tggcctttga caggcgtgga gccagctggg gggccatccg ggccagccgt
     1081 cactacacgg agatggatgc gcggcgggag ctggcagggg tcctacccca agtccatggc
     1141 tcctgggaga gtctgaatga agaatggagt gcacctccgg ccagcagcag ggctcctgtg
     1201 cccagcacgg tgcaggccaa tgcctttgag tttgctgacg ctgatgagga tgacgaggtc
     1261 aaggtgtgag agactggccg tgggcccagg tcctgccagc ctaggggctc acacagaagg
     1321 gctgagttaa tttccttaac gactgcgtct gtcctcaaga catggtcacc tgcccaacgg
     1381 gagttgcccc aaatccttcc tgctctatgc aaggcaggct tggatgtggg gagggtccct
     1441 gctgacctga cccagctccc tccatgcccc taggcccact agccctttag tcataacata
     1501 tgccaccccc ctgtggcctg acagtatggc ctttgtgccc caagatgttt ccctggtggg
     1561 tgggggtggg gcaaggacca cacagggcca ttgtctgagt gggactgcct gcccctgctc
     1621 atggagagct gccgcagaag gccaccactg tgttttcaat agctggttcc aggcttctcc
     1681 tcagttccct gagaaaggtc aggtgtgacc tctaagtaga ttctatctta tgtgtacccc
     1741 agagctgcct cccatgcctg attgtaaaag cctttctggt aagatctgtc tgcccaagga
     1801 ggcaggcctt ggcccctgcc gaggtgtact ttatcctcct gggagtttgg aaagttgagg
     1861 acccccttcc agcaaccccc ctccagctag gagagggggg ccagacgagg taatgagtaa
     1921 ccagcctgga atgttggaag ataagaggcc caggtgggac ccttatctcc agttcctgga
     1981 acacccctgc cccaggtgcc aggaaccagt atctgcccca taatcccatg gggcagcttg
     2041 gcaggtgctc agatcacccg gagagagaca ggttcccatg cacagggtgg ctcaggatca
     2101 cctcccgtcc tcttctcttg gcaatgctat accctgtgcc tcagtttcct cccctgcacc
     2161 aaagacgggg agcattaaca cttatggaaa gtgctaacag ttcttgctgt ggaaataata
     2221 aaaatggatt cttttaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
