LOCUS       XM_039080700            2499 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cell division cycle 37, HSP90
            cochaperone (Cdc37), transcript variant X1, mRNA.
ACCESSION   XM_039080700
VERSION     XM_039080700.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080700.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2499
                     /gene="Cdc37"
                     /note="cell division cycle 37, HSP90 cochaperone; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 45 ESTs, 16 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 237 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:114562"
                     /db_xref="RGD:71006"
     CDS             113..1399
                     /gene="Cdc37"
                     /codon_start=1
                     /product="hsp90 co-chaperone Cdc37 isoform X1"
                     /protein_id="XP_038936628.1"
                     /db_xref="GeneID:114562"
                     /db_xref="RGD:71006"
                     /translation="MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQ
                     KEKEELDRGCRECKRKVAECQRKLKELEVAEGGGQVELERLRAEAQQLRKEERSWEQK
                     LEDMRKKEKNMPWNVDTLSKDGFSKARGHASATLMHLATPPPPMWTGWARRPRPPNPR
                     RTPALPQPTCPLALSQSMVNTKPEKAEEDSEEAREQKHKTFVEKYEKQIKHFGMLHRW
                     DDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCALMEQVAHQTMVMQFILELAKSL
                     KVDPRACFRQFFTKIKTADQQYMEGFKYELEAFKERVRGRAKLRIEKAMKEYEEEERK
                     KRLGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLW
                     VPNSKSGEAKEGEEAGPGDPLLEAVPKAGNEKDISA"
ORIGIN      
        1 cggaagcgga aggggcgggg cggggcgagc ggactctcta gcccttgtgg gtccctgttc
       61 agcgcccggc cgtgtggaga cccgggagcc agtccgggcc tccgaggcga agatggtgga
      121 ctacagcgtt tgggatcaca tcgaggtgtc ggacgatgag gacgagacgc accccaacat
      181 agacacggcc agcctgttcc gctggcggca ccaggcccgg gtggaacgca tggaacagtt
      241 tcagaaggag aaagaagaac tggaccgggg ctgccgggaa tgcaagcgca aggtagccga
      301 gtgccagcgc aagctgaagg aactggaagt ggctgagggt ggtggccagg tggagcttga
      361 gcggcttcga gcggaggcac agcagctgcg caaggaggag cgaagctggg agcagaagct
      421 ggaggacatg cgcaaaaagg agaagaacat gccctggaat gtggacacac tcagcaaaga
      481 tggcttcagc aaggcccgcg gccatgcctc cgccaccttg atgcacttag cgacgccacc
      541 gcctccgatg tggacaggat gggcgcggcg gccacggccc ccaaacccca ggcgcacccc
      601 tgccttgccc cagcccactt gccctctcgc cctgtcacag agcatggtca ataccaagcc
      661 tgagaaggca gaggaagact cagaggaggc aagggagcag aaacacaaga ccttcgttga
      721 aaaatacgag aaacagatca aacatttcgg catgctccac cgctgggatg acagccagaa
      781 gtacctgtca gacaatgtcc acctggtgtg cgaggagaca gccaactacc tggttatctg
      841 gtgcattgac ctggaagtcg aggagaagtg tgccctgatg gagcaggtgg ctcaccagac
      901 catggtcatg cagttcatcc tggagttggc caagagtctg aaggtcgacc cccgggcctg
      961 cttccggcag tttttcacca agatcaagac tgctgaccag cagtacatgg agggcttcaa
     1021 gtatgaactg gaggccttta aggagcgtgt gcggggccgc gccaagctgc gaatagagaa
     1081 ggccatgaag gagtacgagg aggaggagcg caagaagagg ctaggccctg gtggcctgga
     1141 ccctgtggag gtctacgaat ctctgcctga ggagctgcag aagtgctttg atgtgaagga
     1201 tgtacagatg ctgcaagacg ccatcagcaa gatggatcct actgatgcca agtatcacat
     1261 gcagcgttgc atcgattctg gcctctgggt ccccaactcc aagtctggtg aggccaagga
     1321 gggggaggag gcgggccccg gggacccatt gctggaagcc gtccccaaag cgggcaacga
     1381 gaaagacatc agtgcgtgac ccttctccag aaaaggaaac ccagccacca tgtccctagc
     1441 tcccgacttc ttcacttctg ctgctcctca cgtcctggcc catggcctgc cccatgtccc
     1501 ctctcctccg gcctgtcccc agcactcatc agattctctg cttcgggttg aggggctctg
     1561 ctgtctgcag cccccccacc cccatcagcg ttatgccaaa gtcctggggg tctggggagg
     1621 ggcagcagct gccaggttgg tccaccgggt tggggataca catgtcccca tctgggcagg
     1681 gtctgtccct atgggtctat ggtcactgtt tctcttctgt ctagctttct gtcctgcaac
     1741 tggcaacaat gtccaataaa cagttccagg tgctggaagc cactggctca gtgctgtttg
     1801 aggcagaggg tgaacctagg tggggagaac cagagtgcta acagccatgc ccttgccctg
     1861 tccttcactg ttcagaagtc ctaggccttc tgtgtctctc caactccttg tctatctcag
     1921 cctctcccag ttcttttcct ccctcagccc cagcactcca tggagacaag aggacagata
     1981 ggagtttgag ggtagcctag gctacatgag aaatatgcag cctttcacac tggactttgc
     2041 cactgctagg ggaacatact attctaaaat ttaatttgta tgtgtgtgtg cgtggatgcc
     2101 cttgtgtgtt ttctgtgtac ctttggctgt ctgagaacac aatatatagc ccaggctggc
     2161 ctcaaactca aagatctgcc tgcctctatg acctgtcctg agtgttggga tcaaaagcac
     2221 tcctggctta agatttaatt tttgtgtatg agtattctat atgtgcatct agtacatgca
     2281 gaggctagag tcttgtagaa ttgtagttac agatgactct aagtccacca tgtggctccc
     2341 tggagtgaaa tcggtgtcct ctgcaacacg gagccttttc tccagtcctg aggattctac
     2401 tgttggaaag agtaccatgg ggctctggct acagttcagt aacaaagctt ggtttaacct
     2461 gcggtttttg ttctagcagt gtttaaaaaa aaaaaaaaa
//
