LOCUS       NM_001025685            1990 bp    mRNA    linear   ROD 23-JUL-2024
DEFINITION  Rattus norvegicus Cd5 molecule-like (Cd5l), mRNA.
ACCESSION   NM_001025685 XM_227484
VERSION     NM_001025685.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Wu,X.N., Gao,Z.W., Yang,L., Zhang,J., Liu,C., Zhang,H.Z. and
            Dong,K.
  TITLE     CD5L aggravates rheumatoid arthritis progression via promoting
            synovial fibroblasts proliferation and activity
  JOURNAL   Clin Exp Immunol 213 (3), 317-327 (2023)
   PUBMED   37191481
  REMARK    GeneRIF: CD5L aggravates rheumatoid arthritis progression via
            promoting synovial fibroblasts proliferation and activity.
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Maehara,N., Arai,S., Mori,M., Iwamura,Y., Kurokawa,J., Kai,T.,
            Kusunoki,S., Taniguchi,K., Ikeda,K., Ohara,O., Yamamura,K.I. and
            Miyazaki,T.
  TITLE     Circulating AIM prevents hepatocellular carcinoma through
            complement activation
  JOURNAL   Cell Rep 9 (1), 61-74 (2014)
   PUBMED   25284781
REFERENCE   3  (bases 1 to 1990)
  AUTHORS   Bastos-Amador,P., Royo,F., Gonzalez,E., Conde-Vancells,J.,
            Palomo-Diez,L., Borras,F.E. and Falcon-Perez,J.M.
  TITLE     Proteomic analysis of microvesicles from plasma of healthy donors
            reveals high individual variability
  JOURNAL   J Proteomics 75 (12), 3574-3584 (2012)
   PUBMED   22516433
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098724.1.
            
            On Jul 22, 2005 this sequence version replaced XM_227484.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098724.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1990
                     /gene="Cd5l"
                     /note="Cd5 molecule-like"
                     /db_xref="GeneID:310693"
                     /db_xref="RGD:1308526"
     exon            1..90
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..1103
                     /gene="Cd5l"
                     /note="CD5 antigen-like"
                     /codon_start=1
                     /product="CD5 antigen-like precursor"
                     /protein_id="NP_001020856.1"
                     /db_xref="GeneID:310693"
                     /db_xref="RGD:1308526"
                     /translation="MALLFNLILALLTIFVGLCFSESPTRVRLVGGAHRCEGRVEVKH
                     NGQWGTVCDDGWDLIDVSVVCRELNCGAAKKTPSGASYHPPASEGQSVLIQGVECSGA
                     EDMLAQCTLNYDVFDCSHAEDAGVQCENPDNPENVRLVEGLGRCQGRLEVFYQGQWST
                     VCKAGWNLQASKVVCRQLGCGRALLAHRCCNKNTQGKGPIWMSKMSCSGREANLQDCP
                     FSPLESNCTHGEDTWMECEDPFELRLVGGDTTCSGRLEVLHKGSWGSVCDDSWGEKED
                     QVVCKQLGCGKSLFPSPKARQSFGPGTGRIWLDDVSCSGKEESLELCRHRLWGYHDCT
                     HKEDVGVICSEL"
     exon            91..126
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
     exon            127..450
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
     exon            451..774
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
     exon            775..1095
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
     exon            1096..1965
                     /gene="Cd5l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgaatactg ctgcctgagg ccttcagcct gtctcaacac accatcttca gctgccaggg
       61 ccatggctct attgttcaac ttgatactgg ccctcttgac catttttgtt ggactgtgtt
      121 tctcagagtc tccaactaga gtgcggctag tgggaggcgc ccaccgctgt gaagggcgag
      181 tggaggtgaa acacaacggc cagtggggga ctgtgtgcga tgacggctgg gacttgattg
      241 atgtgtctgt ggtgtgccgg gagctgaatt gtggagcagc gaaaaaaacc ccgagtggtg
      301 catcatatca tccaccagca tcagaagggc aaagcgttct tattcaagga gttgaatgca
      361 gtggggcgga agacatgctg gctcaatgta cgctaaatta cgatgttttt gattgctcgc
      421 atgcagaaga tgctggggta cagtgtgaga acccagacaa tccagagaat gtgcggctag
      481 tagagggcct cgggcgctgc cagggtcgac tggaggtgtt ctaccagggc cagtggagca
      541 ctgtgtgcaa agcaggctgg aacttacagg cttcaaaggt ggtgtgcagg cagctgggct
      601 gtgggcgagc actgctggcc cacagatgct gcaataagaa tacccagggc aaaggaccca
      661 tctggatgag caagatgtca tgttctggac gagaagcaaa ccttcaggac tgccctttca
      721 gtcctttgga gagcaattgt acccatggcg aggacacgtg gatggaatgc gaagatccct
      781 ttgagctgag gctggtagga ggagacacca cctgctctgg gaggttggag gtgctgcaca
      841 agggttcctg gggctctgtc tgtgatgaca gctggggaga aaaggaggac caagtggtct
      901 gcaagcaact gggctgtggg aagtccctct ttccatcccc taaagcccgc caaagcttcg
      961 ggcctgggac aggccgcatc tggctggatg acgtcagttg ctcagggaag gaagagtctc
     1021 ttgagctctg ccggcacagg ctgtggggat accatgattg cacgcacaag gaagatgtgg
     1081 gcgtgatctg ctcagagctt tgatgtatga gctggatccc tgcttgttca ttgattctcc
     1141 cagtggttaa atctggcctt gggctttagc cacctctccc tcaacctctc aggagtctga
     1201 acattgtgct catatcttga tccagcgtta catgctacca caatcacctc aagatgtgag
     1261 ctgctgtgct ccttgcctga tgacatttcc aatttcccta tgctcactgt tcactccttg
     1321 gtaacgtccc catctttact tctgctcccc agcctgcctg caactcttgg gcctgccaga
     1381 attgtacagg tcatgattaa ggcacaggcc atgattaagt ctgtgagcca cactgaggat
     1441 gtgacaacat gaggaacact taagagggaa tgtgggtaga cagtattttg gaggttgagg
     1501 agaaaatgca actgtttaaa tgcttttaaa acttgtaaca agtgaagtga tcatggcaat
     1561 aacactttac tactctgttt tctctcagag aaagtaacag ggtggtttcc tacagccctc
     1621 aaatgttacc tgttgagttc tagatgtcta cccaaaacct ccatgtttaa agtttggtgt
     1681 ctaatgcaac agtattctga ggtgggggcc tagagatcta actgcatcac atgatttgat
     1741 ccctcagcct ttatgagtgg attaatcact agtgaatcca ctgggagatg gtagatactt
     1801 caggagttgg gacctagtta gagaagaagt tagttgttgg agtgtgtctt tggaagggga
     1861 tattttgtcc acagcttgac cacctccccg tgtaggtagg ttgcttgcat atcttagcta
     1921 ctgcgtgtga attatactac aataaacatg atgagtgttc aggtaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa
//
