LOCUS       XM_017590101            1657 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CD33 molecule (Cd33), transcript
            variant X1, mRNA.
ACCESSION   XM_017590101
VERSION     XM_017590101.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590101.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590101.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1657
                     /gene="Cd33"
                     /note="CD33 molecule; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 ESTs, 11 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 128 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:690492"
                     /db_xref="RGD:1596020"
     CDS             156..1052
                     /gene="Cd33"
                     /codon_start=1
                     /product="myeloid cell surface antigen CD33 isoform X1"
                     /protein_id="XP_017445590.1"
                     /db_xref="GeneID:690492"
                     /db_xref="RGD:1596020"
                     /translation="MLWIVLLLLLCTDSLVQDLEFQLVAPKSVTVEEALCVHVPCSVS
                     YPSIRPTFGPVTGYWLLKGTSLHEDSPVATNDPRQLVQKATQGRFQLLGDPQKHDCSL
                     LIRDAQKNDTGVYFFRVVREPFVRYSYRANQLLLHVTPLSRTPDIIIPETLRAGHPSN
                     LSCSVPWACEQGTPPTFSWMSDALTSLSSRTTNSSVLTLTPRPQDHGTKLTCLVTFSG
                     AGVTVERTIRLNVTWKSDQMRQVVLVAVGEAAVKLLILGLCLTLLSVVICRRKATKLS
                     VHMNCENPYQGSPAGLQGAQPC"
ORIGIN      
        1 tgctctctgc ctgatttcat tactggggtt ccagtgagat ttctcctcag tcctgtgaca
       61 ccaaaatctg caactcttac ccatgacagg aagcttcaac cacccaactc tccttcccgt
      121 tttacttgta ggaagccagg gccattcact gtgctatgct gtggatagtg ctactgctct
      181 tgctgtgtac agactccctg gttcaggatt tagaattcca gctggtggcg cccaagtcgg
      241 tgacagtaga ggaggccttg tgtgttcatg tgccctgcag tgtttcttac ccctccatta
      301 ggcccacttt tggacctgtc actggctact ggctcctgaa agggacgagt ctccatgaag
      361 attctccagt ggccacaaat gaccccagac aactagtgca gaaggcaaca cagggccgat
      421 tccaactcct tggagaccca cagaaacatg actgttccct gctcatcaga gatgcacaga
      481 aaaatgacac aggagtgtac ttcttcagag tggttagaga accttttgtg agatattctt
      541 acagagcaaa ccagctgttg ctgcatgtga cccctctatc acggactcct gacatcataa
      601 tcccggaaac cctgagagct ggccatccta gcaatctgag ctgctctgtg ccttgggcct
      661 gtgagcaggg gacaccccct accttctcct ggatgtcaga tgccctcacc tccttgagtt
      721 ccagaaccac aaactcctca gtgctgacac tcacacctcg gccccaggac catggtacca
      781 aactcacctg tctggtgacc ttctctggag caggcgtcac tgtggaaaga accatccgcc
      841 tcaatgttac ctggaaatca gaccagatga gacaggtggt cctggtggct gtcggggagg
      901 cagcagtcaa gctcctgatt cttgggctct gtctcacact tctcagtgtg gtgatctgca
      961 ggaggaaggc aacaaaactg tcggtgcaca tgaactgtga aaatccctac caaggctcac
     1021 ccgcaggact ccaaggtgca cagccatgct gagaattcaa gacccttgag gaaggactta
     1081 ccttaggaac agagcagtat ctgaacttag attcccctga atttcatggg ggcgaagtct
     1141 caggagtacc cagagatcta agttcaccaa gctttgctct tgtgtaaagc acctgtgtcc
     1201 tctatggctc cctgcagata attcctggat cccgctgatt ccaacagaca atggattacg
     1261 ctgctgtgtg agtctcacac tctgttgacc atgtctgact ttacaataag agacctggga
     1321 ctgagtctgt gtttcttaat tcacatcatc agaggtcgtt ccctctattt ttggtttttg
     1381 tactcagtat aatgggctcc tgccttctcc tcctgcctca cctctctttc tccttccctc
     1441 tctccacatc tctcatatgg aggaatatac acaagtgtgg gacaatgctc ttgcgcatga
     1501 gtaccatgaa gaccagaggt caaagttcag tgtcttcttc tattgtttgc tacattgtcg
     1561 tcgttgtcgt cgtcatcatc atcatcatca tcatcatcat catcctgaca taggatgtgg
     1621 tggtttgaat aaaaatggcc cccattgggc acaatta
//
